ORF scan function from Ribo-uORF is integrated in RiboToolkit.
Singal peptide enrichment function between different translated genes is developed in RiboToolkit.
Ribo-circRNA function is developed in RiboToolkit.
Expression count tool is released in RiboToolkit.
A total of 39 species are supported in RiboToolkit.
Four bacteria species are supported in RiboToolkit.
FoldView tool was developed to show RNA secondary structures of sequence context around codon pause sites.
MetaView tool was developed to show RPF meta-gene distribution for specific genes among multiple samples.
The batch uploading was developed to allow users to analyze multiple samples at a time.
IGV JavaScript library was integrated in RiboToolkit to show RPF mappings.
The codonFreq tool was developed to analyze the codon statistics on specific gene group.
More species are supported now.
The differential translation functionality is developed in RiboToolkit.
RiboToolkit is released to help studying RNA translation in human and mouse based on Ribo-seq.