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Codon frequency ratio: percentage of codon among all the codons in a specific gene/transcript
CAI: Codon Adaptation Index; CBI: Codon Bias Index
tAI: tRNA adaptation index

All the information (including the reference genomes and annotations) can be downloaded from here.

SN	Species	Genome version	Source	Class
1	Homo sapiens	hg19	GENCODE	Animal
2	Homo sapiens	hg38.gencode_v46	GENCODE	Animal
3	Homo sapiens	hg38	GENCODE	Animal
4	Mus musculus	mm10	GENCODE	Animal
5	Mus musculus	mm39	GENCODE	Animal
6	Rattus norvegicus	rn6	Ensembl	Animal
7	Danio rerio	dre_GRCz11	Ensembl	Animal
8	Bos taurus	bta.ARS-UCD1.2	Ensembl	Animal
9	Canis lupus familiaris	clu.ROS_Cfam_1.0	Ensembl	Animal
10	Gallus gallus	gga.GRCg7b	Ensembl	Animal
11	Gorilla gorilla	ggo.gorGor4	Ensembl	Animal
12	Macaca mulatta	mml.Mmul_10	Ensembl	Animal
13	Pan troglodytes	ptr.Pan_tro_3.0	Ensembl	Animal
14	Sus scrofa	ssc.Sscrofa11.1	Ensembl	Animal
15	Xenopus tropicalis	xtr.UCB_Xtro_10.0	Ensembl	Animal
16	Caenorhabditis elegans	cel_WBcel235	Ensembl	Animal
17	Drosophila melanogaster	dme_BDGP6	Ensembl	Insect
18	Anopheles gambiae	aga.AgamP4	Ensembl	Insect
19	Locusta migratoria	lmi.240118	Other	Insect
20	Saccharomyces cerevisiae	sce_R64	Ensembl	Fungus
21	Neurospora crassa	ncr.NC12	Ensembl	Fungus
22	Arabidopsis thaliana	ara_TAIR10	Ensembl	Plant
23	Acer truncatum	atr.v1	Ensembl	Plant
24	Adiantum capillus-veneris	aca.ASM1452938v2	Ensembl	Plant
25	Amphidinium carterae	aca.v2	Ensembl	Plant
26	Brassica napus	bna.AST_PRJEB5043_v1	Ensembl	Plant
27	Brassica rapa	bra.Brapa_1.0	Ensembl	Plant
28	Brachypodium distachyon	bdi.v3.0	Ensembl	Plant
29	Camellia sinensis	csi.AHAU_CSS_1	Ensembl	Plant
30	Chlamydomonas reinhardtii	cre.v5.5	Ensembl	Plant
31	Cucumis sativus chineseLong v3	csa_chineseLong_v3	Ensembl	Plant
32	Cucumis sativus	csa.ASM407v2	Ensembl	Plant
33	Dalbergia cultrat	dcug.v1	Ensembl	Plant
34	Glycine max	gma_v2	Ensembl	Plant
35	Gossypium raimondii	gra.Graimondii2_0_v6	Ensembl	Plant
36	Hordeum vulgare	hvu.MorexV3	Ensembl	Plant
37	Litchi chinensis	lch.v1	Ensembl	Plant
38	Malus domestica golden	mdo.ASM211411v1	Ensembl	Plant
39	Medicago truncatula	mtr.MedtrA17_4.0	Ensembl	Plant
40	Nicotiana benthamiana	nbe.v1	Ensembl	Plant
41	Nicotiana tabacum	ntab.TN90	Ensembl	Plant
42	Oryza sativa	osa_IRGSP_1	Ensembl	Plant
43	Oryza sativa	osa_msu7	Other	Plant
44	Oryza sativa	osa_huazhan	Other	Plant
45	Oryza sativa	Basmati1.IGDBv1	Pan_rice_33	Plant
46	Oryza sativa	CG14.IGDBv1	Pan_rice_33	Plant
47	Oryza sativa	G46.IGDBv1	Pan_rice_33	Plant
48	Oryza sativa	IR64.IGDBv1	Pan_rice_33	Plant
49	Oryza sativa	Lemont.IGDBv1	Pan_rice_33	Plant
50	Oryza sativa	LJ.IGDBv1	Pan_rice_33	Plant
51	Oryza sativa	MSU.IGDBv1	Pan_rice_33	Plant
52	Oryza sativa	NamRoo.IGDBv1	Pan_rice_33	Plant
53	Oryza sativa	N22.IGDBv1	Pan_rice_33	Plant
54	Oryza sativa	TM.IGDBv1	Pan_rice_33	Plant
55	Oryza sativa	Tumba.IGDBv1	Pan_rice_33	Plant
56	Oryza sativa	WSSM.IGDBv1	Pan_rice_33	Plant
57	Oryza rufipogon	oru.OR_W1943	Ensembl	Plant
58	Oryza indica	osai.ASM465v1	Ensembl	Plant
59	Populus trichocarpa	ptc.Pop_tri_v3	Ensembl	Plant
60	Physcomitrium patens	ppa.Phypa_V3	Ensembl	Plant
61	Selaginella moellendorffii	smo.v1	Ensembl	Plant
62	Solanum lycopersicum	sly_SL3	Ensembl	Plant
63	Solanum tuberosum	stu.SolTub_3.0	Ensembl	Plant
64	Sorghum bicolor	sbi.NCBIv3	Ensembl	Plant
65	Symbiodinium kawagutii	ska.Fugka2468_1	Ensembl	Plant
66	Triticum aestivum	tae.IWGSC	Ensembl	Plant
67	Vitis vinifera	vvi.PN40024.v4	Ensembl	Plant
68	Zea mays	zma_RefGen_v4	Ensembl	Plant
69	Zea mays	zma.B73_NAM5.0	Ensembl	Plant
70	Escherichia coli	ecoli_k12	Ensembl	Bacteria
71	Bacillus subtilis	bsu_168	Ensembl	Bacteria
72	Pyrococcus furiosus	pfu_dsm_3638	Ensembl	Bacteria
73	Halobacterium salinarum	hsa_NRC1	Ensembl	Bacteria
74	Methanosarcina mazei	mma.ASM706v1	Ensembl	Bacteria
75	Acetobacterium woodii	awo_gca_000247605	Ensembl	Bacteria
76	Bacteroides thetaiotaomicron	bth_gca_000011065	Ensembl	Bacteria
77	Caulobacter vibrioides	cvi_gca_000022005	Ensembl	Bacteria
78	Clostridium aceticum	cac_gca_001042715	Ensembl	Bacteria
79	Clostridium drakei	cdr_gca_003096175	Ensembl	Bacteria
80	Clostridium ljungdahlii	clj_gca_000143685	Ensembl	Bacteria
81	Escherichia coli	eco_gca_000931565	Ensembl	Bacteria
82	Eubacterium limosum	eli_gca_001481725	Ensembl	Bacteria
83	Flavobacterium johnsoniae	fjo_gca_000016645	Ensembl	Bacteria
84	Halobacterium salinarum	hsa_gca_000006805	Ensembl	Bacteria
85	Haloferax volcanii	hvo_gca_000025685	Ensembl	Bacteria
86	Klebsiella michiganensis	kmi_gca_000963575	Ensembl	Bacteria
87	Lacticaseibacillus rhamnosusGG	lrh_gca_002287945	Ensembl	Bacteria
88	Listeria innocua	lin_gca_000195795	Ensembl	Bacteria
89	Listeria monocytogenes	lmo_gca_000196035	Ensembl	Bacteria
90	Mycobacterium tuberculosis	mtu_gca_000016145	Ensembl	Bacteria
91	Mycobacteroides abscessus	mab_gca_000069185	Ensembl	Bacteria
92	Mycolicibacterium smegmatis	msm_gca_000015005	Ensembl	Bacteria
93	Pseudomonas aeruginosa	pae_gca_002968755	Ensembl	Bacteria
94	Pseudomonas fluorescens	pfl_gca_001307155	Ensembl	Bacteria
95	Salmonella enterica	sen_gca_003325055	Ensembl	Bacteria
96	Sinorhizobium meliloti	sme_gca_002197125	Ensembl	Bacteria
97	Staphylococcus aureus	sau_gca_001018655	Ensembl	Bacteria
98	Streptococcus pneumoniae	spn_gca_000018965	Ensembl	Bacteria
99	Streptomyces avermitilis	sav_gca_000009765	Ensembl	Bacteria
100	Streptomyces clavuligerus	scl_GCF_005519465	Ensembl	Bacteria
101	Streptomyces coelicolor	sco_GCF_000203835	Ensembl	Bacteria
102	Streptomyces griseus	sgr_gca_000010605	Ensembl	Bacteria
103	Streptomyces lividans	sli_GCF_000739105	Ensembl	Bacteria
104	Streptomyces tsukubensis	sts_GCF_003932715	Ensembl	Bacteria
105	Streptomyces venezuelae	sve_gca_000253235	Ensembl	Bacteria
106	Synechocystis sp.	syn_gca_000478825	Ensembl	Bacteria
107	Vibrio natriegens	vna_gca_001680085	Ensembl	Bacteria
108	Vibrio vulnificus	vvu_gca_000039765	Ensembl	Bacteria
109	Zymomonas mobilis	zmo_gca_000007105	Ensembl	Bacteria