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DiffTE
USE RIBO-SEQ TO PROFILE
Select samples to perform differential expression analysis:
1. The difference analysis of samples Translation Efficiency from the same species;
2. At least one sample for each group.
The fields marked by "*" are required!
Select the reference genome
Species
*
Acetobacterium woodii DSM 1030
Bacillus subtilis
Bacteroides thetaiotaomicron VPI-5482
Caulobacter vibrioides NA1000
Clostridium aceticum
Clostridium ljungdahlii
Escherichia coli
Eubacterium limosum
Flavobacterium johnsoniae UW101
Haloferax volcanii
Klebsiella michiganensis
Lacticaseibacillus rhamnosus GG
Mycobacteroides abscessus ATCC 19977
Mycolicibacterium smegmatis MC2 155
Pseudomonas aeruginosa
Salmonella enterica subsp. enterica serovar Typhimurium
Sinorhizobium meliloti 2011
Staphylococcus aureus
Streptomyces avermitilis MA-4680 = NBRC 14893
Streptomyces clavuligerus
Streptomyces lividans TK24
Streptomyces tsukubensis
Synechocystis
Vaccinia virus WR
Please choose a species for the analysis
×
Differential Translation Efficiency analysis for selected samples (choose the samples into right box)
Sample information
Organism
Sample
Ribo
Input
SRAStudy
ReleaseDate
Experiment
PubMed Detail
SRA study
*
Please choose one project for the analysis
Group A:
*
';
Group B:
*
';
Parameters for Translation Efficiency
Fold change
*
1.2
1.5
2
3
p-value
*
0.5
0.1
0.05
0.01
0.005
0.001
P-value cutoff for differential analysis
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