Ailuropoda_melanoleuca.ailMel1.69.dna.toplevel.fa
Ensembl
Ailuropoda melanoleuca
9646
ailMel1
FASTA DNA sequence for Ailuropoda melanoleuca
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ailuropoda_melanoleuca/dna/Ailuropoda_melanoleuca.ailMel1.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/ailuropoda_melanoleuca/dna/Ailuropoda_melanoleuca.ailMel1.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ailuropoda_melanoleuca/dna/Ailuropoda_melanoleuca.ailMel1.69.dna.toplevel.fa.gz
FASTA
Ailuropoda_melanoleuca.ailMel1.69.dna_rm.toplevel.fa
Ensembl
Ailuropoda melanoleuca
9646
ailMel1
FASTA DNA sequence for Ailuropoda melanoleuca
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ailuropoda_melanoleuca/dna/Ailuropoda_melanoleuca.ailMel1.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/ailuropoda_melanoleuca/dna/Ailuropoda_melanoleuca.ailMel1.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ailuropoda_melanoleuca/dna/Ailuropoda_melanoleuca.ailMel1.69.dna_rm.toplevel.fa.gz
FASTA
Ailuropoda_melanoleuca.ailMel1.69.dna_sm.toplevel.fa
Ensembl
Ailuropoda melanoleuca
9646
ailMel1
FASTA DNA sequence for Ailuropoda melanoleuca
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ailuropoda_melanoleuca/dna/Ailuropoda_melanoleuca.ailMel1.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/ailuropoda_melanoleuca/dna/Ailuropoda_melanoleuca.ailMel1.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ailuropoda_melanoleuca/dna/Ailuropoda_melanoleuca.ailMel1.69.dna_sm.toplevel.fa.gz
FASTA
Ailuropoda_melanoleuca.ailMel1.69.ncrna.fa
Ensembl
Ailuropoda melanoleuca
9646
ailMel1
FASTA ncRNA sequence for Ailuropoda melanoleuca
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ailuropoda_melanoleuca/ncrna/Ailuropoda_melanoleuca.ailMel1.69.ncrna.fa.rz, ensembl/release-69/fasta/ailuropoda_melanoleuca/ncrna/Ailuropoda_melanoleuca.ailMel1.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ailuropoda_melanoleuca/ncrna/Ailuropoda_melanoleuca.ailMel1.69.ncrna.fa.gz
FASTA
Ailuropoda_melanoleuca.ailMel1.69.pep.all.fa
Ensembl
Ailuropoda melanoleuca
9646
ailMel1
FASTA pep sequence for Ailuropoda melanoleuca
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ailuropoda_melanoleuca/pep/Ailuropoda_melanoleuca.ailMel1.69.pep.all.fa.rz, ensembl/release-69/fasta/ailuropoda_melanoleuca/pep/Ailuropoda_melanoleuca.ailMel1.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ailuropoda_melanoleuca/pep/Ailuropoda_melanoleuca.ailMel1.69.pep.all.fa.gz
FASTA
Anolis_carolinensis.AnoCar2.0.69.cdna.all.fa
Ensembl
Anolis carolinensis
28377
AnoCar2.0
FASTA cDNA sequence for Anolis carolinensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/anolis_carolinensis/cdna/Anolis_carolinensis.AnoCar2.0.69.cdna.all.fa.rz, ensembl/release-69/fasta/anolis_carolinensis/cdna/Anolis_carolinensis.AnoCar2.0.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/anolis_carolinensis/cdna/Anolis_carolinensis.AnoCar2.0.69.cdna.all.fa.gz
FASTA
Anolis_carolinensis.AnoCar2.0.69.dna.toplevel.fa
Ensembl
Anolis carolinensis
28377
AnoCar2.0
FASTA DNA sequence for Anolis carolinensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/anolis_carolinensis/dna/Anolis_carolinensis.AnoCar2.0.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/anolis_carolinensis/dna/Anolis_carolinensis.AnoCar2.0.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/anolis_carolinensis/dna/Anolis_carolinensis.AnoCar2.0.69.dna.toplevel.fa.gz
FASTA
Anolis_carolinensis.AnoCar2.0.69.dna_rm.toplevel.fa
Ensembl
Anolis carolinensis
28377
AnoCar2.0
FASTA DNA sequence for Anolis carolinensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/anolis_carolinensis/dna/Anolis_carolinensis.AnoCar2.0.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/anolis_carolinensis/dna/Anolis_carolinensis.AnoCar2.0.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/anolis_carolinensis/dna/Anolis_carolinensis.AnoCar2.0.69.dna_rm.toplevel.fa.gz
FASTA
Anolis_carolinensis.AnoCar2.0.69.dna_sm.toplevel.fa
Ensembl
Anolis carolinensis
28377
AnoCar2.0
FASTA DNA sequence for Anolis carolinensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/anolis_carolinensis/dna/Anolis_carolinensis.AnoCar2.0.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/anolis_carolinensis/dna/Anolis_carolinensis.AnoCar2.0.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/anolis_carolinensis/dna/Anolis_carolinensis.AnoCar2.0.69.dna_sm.toplevel.fa.gz
FASTA
Anolis_carolinensis.AnoCar2.0.69.ncrna.fa
Ensembl
Anolis carolinensis
28377
AnoCar2.0
FASTA ncRNA sequence for Anolis carolinensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/anolis_carolinensis/ncrna/Anolis_carolinensis.AnoCar2.0.69.ncrna.fa.rz, ensembl/release-69/fasta/anolis_carolinensis/ncrna/Anolis_carolinensis.AnoCar2.0.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/anolis_carolinensis/ncrna/Anolis_carolinensis.AnoCar2.0.69.ncrna.fa.gz
FASTA
Anolis_carolinensis.AnoCar2.0.69.pep.all.fa
Ensembl
Anolis carolinensis
28377
AnoCar2.0
FASTA pep sequence for Anolis carolinensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/anolis_carolinensis/pep/Anolis_carolinensis.AnoCar2.0.69.pep.all.fa.rz, ensembl/release-69/fasta/anolis_carolinensis/pep/Anolis_carolinensis.AnoCar2.0.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/anolis_carolinensis/pep/Anolis_carolinensis.AnoCar2.0.69.pep.all.fa.gz
FASTA
Bos_taurus.UMD3.1.69.cdna.all.fa
Ensembl
Bos taurus
9913
UMD3.1
FASTA cDNA sequence for Bos taurus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/bos_taurus/cdna/Bos_taurus.UMD3.1.69.cdna.all.fa.rz, ensembl/release-69/fasta/bos_taurus/cdna/Bos_taurus.UMD3.1.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/bos_taurus/cdna/Bos_taurus.UMD3.1.69.cdna.all.fa.gz
FASTA
Bos_taurus.UMD3.1.69.dna.toplevel.fa
Ensembl
Bos taurus
9913
UMD3.1
FASTA DNA sequence for Bos taurus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/bos_taurus/dna/Bos_taurus.UMD3.1.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/bos_taurus/dna/Bos_taurus.UMD3.1.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/bos_taurus/dna/Bos_taurus.UMD3.1.69.dna.toplevel.fa.gz
FASTA
Bos_taurus.UMD3.1.69.dna_rm.toplevel.fa
Ensembl
Bos taurus
9913
UMD3.1
FASTA DNA sequence for Bos taurus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/bos_taurus/dna/Bos_taurus.UMD3.1.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/bos_taurus/dna/Bos_taurus.UMD3.1.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/bos_taurus/dna/Bos_taurus.UMD3.1.69.dna_rm.toplevel.fa.gz
FASTA
Bos_taurus.UMD3.1.69.dna_sm.toplevel.fa
Ensembl
Bos taurus
9913
UMD3.1
FASTA DNA sequence for Bos taurus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/bos_taurus/dna/Bos_taurus.UMD3.1.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/bos_taurus/dna/Bos_taurus.UMD3.1.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/bos_taurus/dna/Bos_taurus.UMD3.1.69.dna_sm.toplevel.fa.gz
FASTA
Bos_taurus.UMD3.1.69.ncrna.fa
Ensembl
Bos taurus
9913
UMD3.1
FASTA ncRNA sequence for Bos taurus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/bos_taurus/ncrna/Bos_taurus.UMD3.1.69.ncrna.fa.rz, ensembl/release-69/fasta/bos_taurus/ncrna/Bos_taurus.UMD3.1.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/bos_taurus/ncrna/Bos_taurus.UMD3.1.69.ncrna.fa.gz
FASTA
Bos_taurus.UMD3.1.69.pep.all.fa
Ensembl
Bos taurus
9913
UMD3.1
FASTA pep sequence for Bos taurus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/bos_taurus/pep/Bos_taurus.UMD3.1.69.pep.all.fa.rz, ensembl/release-69/fasta/bos_taurus/pep/Bos_taurus.UMD3.1.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/bos_taurus/pep/Bos_taurus.UMD3.1.69.pep.all.fa.gz
FASTA
Caenorhabditis_elegans.WBcel215.69.cdna.all.fa
Ensembl
Caenorhabditis elegans
6239
WBcel215
FASTA cDNA sequence for Caenorhabditis elegans
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/caenorhabditis_elegans/cdna/Caenorhabditis_elegans.WBcel215.69.cdna.all.fa.rz, ensembl/release-69/fasta/caenorhabditis_elegans/cdna/Caenorhabditis_elegans.WBcel215.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/caenorhabditis_elegans/cdna/Caenorhabditis_elegans.WBcel215.69.cdna.all.fa.gz
FASTA
Caenorhabditis_elegans.WBcel215.69.dna.toplevel.fa
Ensembl
Caenorhabditis elegans
6239
WBcel215
FASTA DNA sequence for Caenorhabditis elegans
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/caenorhabditis_elegans/dna/Caenorhabditis_elegans.WBcel215.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/caenorhabditis_elegans/dna/Caenorhabditis_elegans.WBcel215.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/caenorhabditis_elegans/dna/Caenorhabditis_elegans.WBcel215.69.dna.toplevel.fa.gz
FASTA
Caenorhabditis_elegans.WBcel215.69.dna_rm.toplevel.fa
Ensembl
Caenorhabditis elegans
6239
WBcel215
FASTA DNA sequence for Caenorhabditis elegans
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/caenorhabditis_elegans/dna/Caenorhabditis_elegans.WBcel215.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/caenorhabditis_elegans/dna/Caenorhabditis_elegans.WBcel215.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/caenorhabditis_elegans/dna/Caenorhabditis_elegans.WBcel215.69.dna_rm.toplevel.fa.gz
FASTA
Caenorhabditis_elegans.WBcel215.69.dna_sm.toplevel.fa
Ensembl
Caenorhabditis elegans
6239
WBcel215
FASTA DNA sequence for Caenorhabditis elegans
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/caenorhabditis_elegans/dna/Caenorhabditis_elegans.WBcel215.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/caenorhabditis_elegans/dna/Caenorhabditis_elegans.WBcel215.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/caenorhabditis_elegans/dna/Caenorhabditis_elegans.WBcel215.69.dna_sm.toplevel.fa.gz
FASTA
Caenorhabditis_elegans.WBcel215.69.ncrna.fa
Ensembl
Caenorhabditis elegans
6239
WBcel215
FASTA ncRNA sequence for Caenorhabditis elegans
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/caenorhabditis_elegans/ncrna/Caenorhabditis_elegans.WBcel215.69.ncrna.fa.rz, ensembl/release-69/fasta/caenorhabditis_elegans/ncrna/Caenorhabditis_elegans.WBcel215.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/caenorhabditis_elegans/ncrna/Caenorhabditis_elegans.WBcel215.69.ncrna.fa.gz
FASTA
Caenorhabditis_elegans.WBcel215.69.pep.all.fa
Ensembl
Caenorhabditis elegans
6239
WBcel215
FASTA pep sequence for Caenorhabditis elegans
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/caenorhabditis_elegans/pep/Caenorhabditis_elegans.WBcel215.69.pep.all.fa.rz, ensembl/release-69/fasta/caenorhabditis_elegans/pep/Caenorhabditis_elegans.WBcel215.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/caenorhabditis_elegans/pep/Caenorhabditis_elegans.WBcel215.69.pep.all.fa.gz
FASTA
Callithrix_jacchus.C_jacchus3.2.1.69.cdna.all.fa
Ensembl
Callithrix jacchus
9483
C_jacchus3.2.1
FASTA cDNA sequence for Callithrix jacchus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/callithrix_jacchus/cdna/Callithrix_jacchus.C_jacchus3.2.1.69.cdna.all.fa.rz, ensembl/release-69/fasta/callithrix_jacchus/cdna/Callithrix_jacchus.C_jacchus3.2.1.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/callithrix_jacchus/cdna/Callithrix_jacchus.C_jacchus3.2.1.69.cdna.all.fa.gz
FASTA
Callithrix_jacchus.C_jacchus3.2.1.69.dna.toplevel.fa
Ensembl
Callithrix jacchus
9483
C_jacchus3.2.1
FASTA DNA sequence for Callithrix jacchus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/callithrix_jacchus/dna/Callithrix_jacchus.C_jacchus3.2.1.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/callithrix_jacchus/dna/Callithrix_jacchus.C_jacchus3.2.1.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/callithrix_jacchus/dna/Callithrix_jacchus.C_jacchus3.2.1.69.dna.toplevel.fa.gz
FASTA
Callithrix_jacchus.C_jacchus3.2.1.69.dna_rm.toplevel.fa
Ensembl
Callithrix jacchus
9483
C_jacchus3.2.1
FASTA DNA sequence for Callithrix jacchus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/callithrix_jacchus/dna/Callithrix_jacchus.C_jacchus3.2.1.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/callithrix_jacchus/dna/Callithrix_jacchus.C_jacchus3.2.1.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/callithrix_jacchus/dna/Callithrix_jacchus.C_jacchus3.2.1.69.dna_rm.toplevel.fa.gz
FASTA
Callithrix_jacchus.C_jacchus3.2.1.69.dna_sm.toplevel.fa
Ensembl
Callithrix jacchus
9483
C_jacchus3.2.1
FASTA DNA sequence for Callithrix jacchus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/callithrix_jacchus/dna/Callithrix_jacchus.C_jacchus3.2.1.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/callithrix_jacchus/dna/Callithrix_jacchus.C_jacchus3.2.1.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/callithrix_jacchus/dna/Callithrix_jacchus.C_jacchus3.2.1.69.dna_sm.toplevel.fa.gz
FASTA
Callithrix_jacchus.C_jacchus3.2.1.69.ncrna.fa
Ensembl
Callithrix jacchus
9483
C_jacchus3.2.1
FASTA ncRNA sequence for Callithrix jacchus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/callithrix_jacchus/ncrna/Callithrix_jacchus.C_jacchus3.2.1.69.ncrna.fa.rz, ensembl/release-69/fasta/callithrix_jacchus/ncrna/Callithrix_jacchus.C_jacchus3.2.1.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/callithrix_jacchus/ncrna/Callithrix_jacchus.C_jacchus3.2.1.69.ncrna.fa.gz
FASTA
Callithrix_jacchus.C_jacchus3.2.1.69.pep.all.fa
Ensembl
Callithrix jacchus
9483
C_jacchus3.2.1
FASTA pep sequence for Callithrix jacchus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/callithrix_jacchus/pep/Callithrix_jacchus.C_jacchus3.2.1.69.pep.all.fa.rz, ensembl/release-69/fasta/callithrix_jacchus/pep/Callithrix_jacchus.C_jacchus3.2.1.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/callithrix_jacchus/pep/Callithrix_jacchus.C_jacchus3.2.1.69.pep.all.fa.gz
FASTA
Canis_familiaris.CanFam3.1.69.cdna.all.fa
Ensembl
Canis familiaris
9615
CanFam3.1
FASTA cDNA sequence for Canis familiaris
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/canis_familiaris/cdna/Canis_familiaris.CanFam3.1.69.cdna.all.fa.rz, ensembl/release-69/fasta/canis_familiaris/cdna/Canis_familiaris.CanFam3.1.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/canis_familiaris/cdna/Canis_familiaris.CanFam3.1.69.cdna.all.fa.gz
FASTA
Canis_familiaris.CanFam3.1.69.dna.toplevel.fa
Ensembl
Canis familiaris
9615
CanFam3.1
FASTA DNA sequence for Canis familiaris
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/canis_familiaris/dna/Canis_familiaris.CanFam3.1.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/canis_familiaris/dna/Canis_familiaris.CanFam3.1.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/canis_familiaris/dna/Canis_familiaris.CanFam3.1.69.dna.toplevel.fa.gz
FASTA
Canis_familiaris.CanFam3.1.69.dna_rm.toplevel.fa
Ensembl
Canis familiaris
9615
CanFam3.1
FASTA DNA sequence for Canis familiaris
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/canis_familiaris/dna/Canis_familiaris.CanFam3.1.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/canis_familiaris/dna/Canis_familiaris.CanFam3.1.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/canis_familiaris/dna/Canis_familiaris.CanFam3.1.69.dna_rm.toplevel.fa.gz
FASTA
Canis_familiaris.CanFam3.1.69.dna_sm.toplevel.fa
Ensembl
Canis familiaris
9615
CanFam3.1
FASTA DNA sequence for Canis familiaris
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/canis_familiaris/dna/Canis_familiaris.CanFam3.1.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/canis_familiaris/dna/Canis_familiaris.CanFam3.1.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/canis_familiaris/dna/Canis_familiaris.CanFam3.1.69.dna_sm.toplevel.fa.gz
FASTA
Canis_familiaris.CanFam3.1.69.ncrna.fa
Ensembl
Canis familiaris
9615
CanFam3.1
FASTA ncRNA sequence for Canis familiaris
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/canis_familiaris/ncrna/Canis_familiaris.CanFam3.1.69.ncrna.fa.rz, ensembl/release-69/fasta/canis_familiaris/ncrna/Canis_familiaris.CanFam3.1.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/canis_familiaris/ncrna/Canis_familiaris.CanFam3.1.69.ncrna.fa.gz
FASTA
Canis_familiaris.CanFam3.1.69.pep.all.fa
Ensembl
Canis familiaris
9615
CanFam3.1
FASTA pep sequence for Canis familiaris
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/canis_familiaris/pep/Canis_familiaris.CanFam3.1.69.pep.all.fa.rz, ensembl/release-69/fasta/canis_familiaris/pep/Canis_familiaris.CanFam3.1.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/canis_familiaris/pep/Canis_familiaris.CanFam3.1.69.pep.all.fa.gz
FASTA
Cavia_porcellus.cavPor3.69.cdna.all.fa
Ensembl
Cavia porcellus
10141
cavPor3
FASTA cDNA sequence for Cavia porcellus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/cavia_porcellus/cdna/Cavia_porcellus.cavPor3.69.cdna.all.fa.rz, ensembl/release-69/fasta/cavia_porcellus/cdna/Cavia_porcellus.cavPor3.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/cavia_porcellus/cdna/Cavia_porcellus.cavPor3.69.cdna.all.fa.gz
FASTA
Cavia_porcellus.cavPor3.69.dna.toplevel.fa
Ensembl
Cavia porcellus
10141
cavPor3
FASTA DNA sequence for Cavia porcellus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/cavia_porcellus/dna/Cavia_porcellus.cavPor3.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/cavia_porcellus/dna/Cavia_porcellus.cavPor3.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/cavia_porcellus/dna/Cavia_porcellus.cavPor3.69.dna.toplevel.fa.gz
FASTA
Cavia_porcellus.cavPor3.69.dna_rm.toplevel.fa
Ensembl
Cavia porcellus
10141
cavPor3
FASTA DNA sequence for Cavia porcellus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/cavia_porcellus/dna/Cavia_porcellus.cavPor3.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/cavia_porcellus/dna/Cavia_porcellus.cavPor3.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/cavia_porcellus/dna/Cavia_porcellus.cavPor3.69.dna_rm.toplevel.fa.gz
FASTA
Cavia_porcellus.cavPor3.69.dna_sm.toplevel.fa
Ensembl
Cavia porcellus
10141
cavPor3
FASTA DNA sequence for Cavia porcellus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/cavia_porcellus/dna/Cavia_porcellus.cavPor3.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/cavia_porcellus/dna/Cavia_porcellus.cavPor3.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/cavia_porcellus/dna/Cavia_porcellus.cavPor3.69.dna_sm.toplevel.fa.gz
FASTA
Cavia_porcellus.cavPor3.69.ncrna.fa
Ensembl
Cavia porcellus
10141
cavPor3
FASTA ncRNA sequence for Cavia porcellus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/cavia_porcellus/ncrna/Cavia_porcellus.cavPor3.69.ncrna.fa.rz, ensembl/release-69/fasta/cavia_porcellus/ncrna/Cavia_porcellus.cavPor3.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/cavia_porcellus/ncrna/Cavia_porcellus.cavPor3.69.ncrna.fa.gz
FASTA
Cavia_porcellus.cavPor3.69.pep.all.fa
Ensembl
Cavia porcellus
10141
cavPor3
FASTA pep sequence for Cavia porcellus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/cavia_porcellus/pep/Cavia_porcellus.cavPor3.69.pep.all.fa.rz, ensembl/release-69/fasta/cavia_porcellus/pep/Cavia_porcellus.cavPor3.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/cavia_porcellus/pep/Cavia_porcellus.cavPor3.69.pep.all.fa.gz
FASTA
Choloepus_hoffmanni.choHof1.69.cdna.all.fa
Ensembl
Choloepus hoffmanni
9358
choHof1
FASTA cDNA sequence for Choloepus hoffmanni
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/choloepus_hoffmanni/cdna/Choloepus_hoffmanni.choHof1.69.cdna.all.fa.rz, ensembl/release-69/fasta/choloepus_hoffmanni/cdna/Choloepus_hoffmanni.choHof1.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/choloepus_hoffmanni/cdna/Choloepus_hoffmanni.choHof1.69.cdna.all.fa.gz
FASTA
Choloepus_hoffmanni.choHof1.69.dna.toplevel.fa
Ensembl
Choloepus hoffmanni
9358
choHof1
FASTA DNA sequence for Choloepus hoffmanni
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/choloepus_hoffmanni/dna/Choloepus_hoffmanni.choHof1.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/choloepus_hoffmanni/dna/Choloepus_hoffmanni.choHof1.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/choloepus_hoffmanni/dna/Choloepus_hoffmanni.choHof1.69.dna.toplevel.fa.gz
FASTA
Choloepus_hoffmanni.choHof1.69.dna_rm.toplevel.fa
Ensembl
Choloepus hoffmanni
9358
choHof1
FASTA DNA sequence for Choloepus hoffmanni
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/choloepus_hoffmanni/dna/Choloepus_hoffmanni.choHof1.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/choloepus_hoffmanni/dna/Choloepus_hoffmanni.choHof1.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/choloepus_hoffmanni/dna/Choloepus_hoffmanni.choHof1.69.dna_rm.toplevel.fa.gz
FASTA
Choloepus_hoffmanni.choHof1.69.dna_sm.toplevel.fa
Ensembl
Choloepus hoffmanni
9358
choHof1
FASTA DNA sequence for Choloepus hoffmanni
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/choloepus_hoffmanni/dna/Choloepus_hoffmanni.choHof1.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/choloepus_hoffmanni/dna/Choloepus_hoffmanni.choHof1.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/choloepus_hoffmanni/dna/Choloepus_hoffmanni.choHof1.69.dna_sm.toplevel.fa.gz
FASTA
Choloepus_hoffmanni.choHof1.69.ncrna.fa
Ensembl
Choloepus hoffmanni
9358
choHof1
FASTA ncRNA sequence for Choloepus hoffmanni
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/choloepus_hoffmanni/ncrna/Choloepus_hoffmanni.choHof1.69.ncrna.fa.rz, ensembl/release-69/fasta/choloepus_hoffmanni/ncrna/Choloepus_hoffmanni.choHof1.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/choloepus_hoffmanni/ncrna/Choloepus_hoffmanni.choHof1.69.ncrna.fa.gz
FASTA
Choloepus_hoffmanni.choHof1.69.pep.all.fa
Ensembl
Choloepus hoffmanni
9358
choHof1
FASTA pep sequence for Choloepus hoffmanni
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/choloepus_hoffmanni/pep/Choloepus_hoffmanni.choHof1.69.pep.all.fa.rz, ensembl/release-69/fasta/choloepus_hoffmanni/pep/Choloepus_hoffmanni.choHof1.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/choloepus_hoffmanni/pep/Choloepus_hoffmanni.choHof1.69.pep.all.fa.gz
FASTA
Ciona_intestinalis.KH.69.cdna.all.fa
Ensembl
Ciona intestinalis
7719
KH
FASTA cDNA sequence for Ciona intestinalis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ciona_intestinalis/cdna/Ciona_intestinalis.KH.69.cdna.all.fa.rz, ensembl/release-69/fasta/ciona_intestinalis/cdna/Ciona_intestinalis.KH.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ciona_intestinalis/cdna/Ciona_intestinalis.KH.69.cdna.all.fa.gz
FASTA
Ciona_intestinalis.KH.69.dna.toplevel.fa
Ensembl
Ciona intestinalis
7719
KH
FASTA DNA sequence for Ciona intestinalis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ciona_intestinalis/dna/Ciona_intestinalis.KH.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/ciona_intestinalis/dna/Ciona_intestinalis.KH.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ciona_intestinalis/dna/Ciona_intestinalis.KH.69.dna.toplevel.fa.gz
FASTA
Ciona_intestinalis.KH.69.dna_rm.toplevel.fa
Ensembl
Ciona intestinalis
7719
KH
FASTA DNA sequence for Ciona intestinalis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ciona_intestinalis/dna/Ciona_intestinalis.KH.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/ciona_intestinalis/dna/Ciona_intestinalis.KH.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ciona_intestinalis/dna/Ciona_intestinalis.KH.69.dna_rm.toplevel.fa.gz
FASTA
Ciona_intestinalis.KH.69.dna_sm.toplevel.fa
Ensembl
Ciona intestinalis
7719
KH
FASTA DNA sequence for Ciona intestinalis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ciona_intestinalis/dna/Ciona_intestinalis.KH.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/ciona_intestinalis/dna/Ciona_intestinalis.KH.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ciona_intestinalis/dna/Ciona_intestinalis.KH.69.dna_sm.toplevel.fa.gz
FASTA
Ciona_intestinalis.KH.69.ncrna.fa
Ensembl
Ciona intestinalis
7719
KH
FASTA ncRNA sequence for Ciona intestinalis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ciona_intestinalis/ncrna/Ciona_intestinalis.KH.69.ncrna.fa.rz, ensembl/release-69/fasta/ciona_intestinalis/ncrna/Ciona_intestinalis.KH.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ciona_intestinalis/ncrna/Ciona_intestinalis.KH.69.ncrna.fa.gz
FASTA
Ciona_intestinalis.KH.69.pep.all.fa
Ensembl
Ciona intestinalis
7719
KH
FASTA pep sequence for Ciona intestinalis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ciona_intestinalis/pep/Ciona_intestinalis.KH.69.pep.all.fa.rz, ensembl/release-69/fasta/ciona_intestinalis/pep/Ciona_intestinalis.KH.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ciona_intestinalis/pep/Ciona_intestinalis.KH.69.pep.all.fa.gz
FASTA
Ciona_savignyi.CSAV2.0.69.cdna.all.fa
Ensembl
Ciona savignyi
51511
CSAV2.0
FASTA cDNA sequence for Ciona savignyi
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ciona_savignyi/cdna/Ciona_savignyi.CSAV2.0.69.cdna.all.fa.rz, ensembl/release-69/fasta/ciona_savignyi/cdna/Ciona_savignyi.CSAV2.0.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ciona_savignyi/cdna/Ciona_savignyi.CSAV2.0.69.cdna.all.fa.gz
FASTA
Ciona_savignyi.CSAV2.0.69.dna.toplevel.fa
Ensembl
Ciona savignyi
51511
CSAV2.0
FASTA DNA sequence for Ciona savignyi
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ciona_savignyi/dna/Ciona_savignyi.CSAV2.0.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/ciona_savignyi/dna/Ciona_savignyi.CSAV2.0.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ciona_savignyi/dna/Ciona_savignyi.CSAV2.0.69.dna.toplevel.fa.gz
FASTA
Ciona_savignyi.CSAV2.0.69.dna_rm.toplevel.fa
Ensembl
Ciona savignyi
51511
CSAV2.0
FASTA DNA sequence for Ciona savignyi
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ciona_savignyi/dna/Ciona_savignyi.CSAV2.0.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/ciona_savignyi/dna/Ciona_savignyi.CSAV2.0.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ciona_savignyi/dna/Ciona_savignyi.CSAV2.0.69.dna_rm.toplevel.fa.gz
FASTA
Ciona_savignyi.CSAV2.0.69.dna_sm.toplevel.fa
Ensembl
Ciona savignyi
51511
CSAV2.0
FASTA DNA sequence for Ciona savignyi
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ciona_savignyi/dna/Ciona_savignyi.CSAV2.0.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/ciona_savignyi/dna/Ciona_savignyi.CSAV2.0.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ciona_savignyi/dna/Ciona_savignyi.CSAV2.0.69.dna_sm.toplevel.fa.gz
FASTA
Ciona_savignyi.CSAV2.0.69.ncrna.fa
Ensembl
Ciona savignyi
51511
CSAV2.0
FASTA ncRNA sequence for Ciona savignyi
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ciona_savignyi/ncrna/Ciona_savignyi.CSAV2.0.69.ncrna.fa.rz, ensembl/release-69/fasta/ciona_savignyi/ncrna/Ciona_savignyi.CSAV2.0.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ciona_savignyi/ncrna/Ciona_savignyi.CSAV2.0.69.ncrna.fa.gz
FASTA
Ciona_savignyi.CSAV2.0.69.pep.all.fa
Ensembl
Ciona savignyi
51511
CSAV2.0
FASTA pep sequence for Ciona savignyi
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ciona_savignyi/pep/Ciona_savignyi.CSAV2.0.69.pep.all.fa.rz, ensembl/release-69/fasta/ciona_savignyi/pep/Ciona_savignyi.CSAV2.0.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ciona_savignyi/pep/Ciona_savignyi.CSAV2.0.69.pep.all.fa.gz
FASTA
Danio_rerio.Zv9.69.cdna.all.fa
Ensembl
Danio rerio
7955
Zv9
FASTA cDNA sequence for Danio rerio
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/danio_rerio/cdna/Danio_rerio.Zv9.69.cdna.all.fa.rz, ensembl/release-69/fasta/danio_rerio/cdna/Danio_rerio.Zv9.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/danio_rerio/cdna/Danio_rerio.Zv9.69.cdna.all.fa.gz
FASTA
Danio_rerio.Zv9.69.dna.toplevel.fa
Ensembl
Danio rerio
7955
Zv9
FASTA DNA sequence for Danio rerio
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/danio_rerio/dna/Danio_rerio.Zv9.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/danio_rerio/dna/Danio_rerio.Zv9.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/danio_rerio/dna/Danio_rerio.Zv9.69.dna.toplevel.fa.gz
FASTA
Danio_rerio.Zv9.69.dna_rm.toplevel.fa
Ensembl
Danio rerio
7955
Zv9
FASTA DNA sequence for Danio rerio
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/danio_rerio/dna/Danio_rerio.Zv9.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/danio_rerio/dna/Danio_rerio.Zv9.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/danio_rerio/dna/Danio_rerio.Zv9.69.dna_rm.toplevel.fa.gz
FASTA
Danio_rerio.Zv9.69.dna_sm.toplevel.fa
Ensembl
Danio rerio
7955
Zv9
FASTA DNA sequence for Danio rerio
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/danio_rerio/dna/Danio_rerio.Zv9.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/danio_rerio/dna/Danio_rerio.Zv9.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/danio_rerio/dna/Danio_rerio.Zv9.69.dna_sm.toplevel.fa.gz
FASTA
Danio_rerio.Zv9.69.ncrna.fa
Ensembl
Danio rerio
7955
Zv9
FASTA ncRNA sequence for Danio rerio
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/danio_rerio/ncrna/Danio_rerio.Zv9.69.ncrna.fa.rz, ensembl/release-69/fasta/danio_rerio/ncrna/Danio_rerio.Zv9.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/danio_rerio/ncrna/Danio_rerio.Zv9.69.ncrna.fa.gz
FASTA
Danio_rerio.Zv9.69.pep.all.fa
Ensembl
Danio rerio
7955
Zv9
FASTA pep sequence for Danio rerio
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/danio_rerio/pep/Danio_rerio.Zv9.69.pep.all.fa.rz, ensembl/release-69/fasta/danio_rerio/pep/Danio_rerio.Zv9.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/danio_rerio/pep/Danio_rerio.Zv9.69.pep.all.fa.gz
FASTA
Dasypus_novemcinctus.dasNov2.69.cdna.all.fa
Ensembl
Dasypus novemcinctus
9361
dasNov2
FASTA cDNA sequence for Dasypus novemcinctus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/dasypus_novemcinctus/cdna/Dasypus_novemcinctus.dasNov2.69.cdna.all.fa.rz, ensembl/release-69/fasta/dasypus_novemcinctus/cdna/Dasypus_novemcinctus.dasNov2.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/dasypus_novemcinctus/cdna/Dasypus_novemcinctus.dasNov2.69.cdna.all.fa.gz
FASTA
Dasypus_novemcinctus.dasNov2.69.dna.toplevel.fa
Ensembl
Dasypus novemcinctus
9361
dasNov2
FASTA DNA sequence for Dasypus novemcinctus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/dasypus_novemcinctus/dna/Dasypus_novemcinctus.dasNov2.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/dasypus_novemcinctus/dna/Dasypus_novemcinctus.dasNov2.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/dasypus_novemcinctus/dna/Dasypus_novemcinctus.dasNov2.69.dna.toplevel.fa.gz
FASTA
Dasypus_novemcinctus.dasNov2.69.dna_rm.toplevel.fa
Ensembl
Dasypus novemcinctus
9361
dasNov2
FASTA DNA sequence for Dasypus novemcinctus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/dasypus_novemcinctus/dna/Dasypus_novemcinctus.dasNov2.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/dasypus_novemcinctus/dna/Dasypus_novemcinctus.dasNov2.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/dasypus_novemcinctus/dna/Dasypus_novemcinctus.dasNov2.69.dna_rm.toplevel.fa.gz
FASTA
Dasypus_novemcinctus.dasNov2.69.dna_sm.toplevel.fa
Ensembl
Dasypus novemcinctus
9361
dasNov2
FASTA DNA sequence for Dasypus novemcinctus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/dasypus_novemcinctus/dna/Dasypus_novemcinctus.dasNov2.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/dasypus_novemcinctus/dna/Dasypus_novemcinctus.dasNov2.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/dasypus_novemcinctus/dna/Dasypus_novemcinctus.dasNov2.69.dna_sm.toplevel.fa.gz
FASTA
Dasypus_novemcinctus.dasNov2.69.ncrna.fa
Ensembl
Dasypus novemcinctus
9361
dasNov2
FASTA ncRNA sequence for Dasypus novemcinctus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/dasypus_novemcinctus/ncrna/Dasypus_novemcinctus.dasNov2.69.ncrna.fa.rz, ensembl/release-69/fasta/dasypus_novemcinctus/ncrna/Dasypus_novemcinctus.dasNov2.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/dasypus_novemcinctus/ncrna/Dasypus_novemcinctus.dasNov2.69.ncrna.fa.gz
FASTA
Dasypus_novemcinctus.dasNov2.69.pep.all.fa
Ensembl
Dasypus novemcinctus
9361
dasNov2
FASTA pep sequence for Dasypus novemcinctus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/dasypus_novemcinctus/pep/Dasypus_novemcinctus.dasNov2.69.pep.all.fa.rz, ensembl/release-69/fasta/dasypus_novemcinctus/pep/Dasypus_novemcinctus.dasNov2.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/dasypus_novemcinctus/pep/Dasypus_novemcinctus.dasNov2.69.pep.all.fa.gz
FASTA
Dipodomys_ordii.dipOrd1.69.cdna.all.fa
Ensembl
Dipodomys ordii
10020
dipOrd1
FASTA cDNA sequence for Dipodomys ordii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/dipodomys_ordii/cdna/Dipodomys_ordii.dipOrd1.69.cdna.all.fa.rz, ensembl/release-69/fasta/dipodomys_ordii/cdna/Dipodomys_ordii.dipOrd1.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/dipodomys_ordii/cdna/Dipodomys_ordii.dipOrd1.69.cdna.all.fa.gz
FASTA
Dipodomys_ordii.dipOrd1.69.dna.toplevel.fa
Ensembl
Dipodomys ordii
10020
dipOrd1
FASTA DNA sequence for Dipodomys ordii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/dipodomys_ordii/dna/Dipodomys_ordii.dipOrd1.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/dipodomys_ordii/dna/Dipodomys_ordii.dipOrd1.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/dipodomys_ordii/dna/Dipodomys_ordii.dipOrd1.69.dna.toplevel.fa.gz
FASTA
Dipodomys_ordii.dipOrd1.69.dna_rm.toplevel.fa
Ensembl
Dipodomys ordii
10020
dipOrd1
FASTA DNA sequence for Dipodomys ordii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/dipodomys_ordii/dna/Dipodomys_ordii.dipOrd1.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/dipodomys_ordii/dna/Dipodomys_ordii.dipOrd1.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/dipodomys_ordii/dna/Dipodomys_ordii.dipOrd1.69.dna_rm.toplevel.fa.gz
FASTA
Dipodomys_ordii.dipOrd1.69.dna_sm.toplevel.fa
Ensembl
Dipodomys ordii
10020
dipOrd1
FASTA DNA sequence for Dipodomys ordii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/dipodomys_ordii/dna/Dipodomys_ordii.dipOrd1.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/dipodomys_ordii/dna/Dipodomys_ordii.dipOrd1.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/dipodomys_ordii/dna/Dipodomys_ordii.dipOrd1.69.dna_sm.toplevel.fa.gz
FASTA
Dipodomys_ordii.dipOrd1.69.ncrna.fa
Ensembl
Dipodomys ordii
10020
dipOrd1
FASTA ncRNA sequence for Dipodomys ordii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/dipodomys_ordii/ncrna/Dipodomys_ordii.dipOrd1.69.ncrna.fa.rz, ensembl/release-69/fasta/dipodomys_ordii/ncrna/Dipodomys_ordii.dipOrd1.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/dipodomys_ordii/ncrna/Dipodomys_ordii.dipOrd1.69.ncrna.fa.gz
FASTA
Dipodomys_ordii.dipOrd1.69.pep.all.fa
Ensembl
Dipodomys ordii
10020
dipOrd1
FASTA pep sequence for Dipodomys ordii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/dipodomys_ordii/pep/Dipodomys_ordii.dipOrd1.69.pep.all.fa.rz, ensembl/release-69/fasta/dipodomys_ordii/pep/Dipodomys_ordii.dipOrd1.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/dipodomys_ordii/pep/Dipodomys_ordii.dipOrd1.69.pep.all.fa.gz
FASTA
Drosophila_melanogaster.BDGP5.69.cdna.all.fa
Ensembl
Drosophila melanogaster
7227
BDGP5
FASTA cDNA sequence for Drosophila melanogaster
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/drosophila_melanogaster/cdna/Drosophila_melanogaster.BDGP5.69.cdna.all.fa.rz, ensembl/release-69/fasta/drosophila_melanogaster/cdna/Drosophila_melanogaster.BDGP5.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/drosophila_melanogaster/cdna/Drosophila_melanogaster.BDGP5.69.cdna.all.fa.gz
FASTA
Drosophila_melanogaster.BDGP5.69.dna.toplevel.fa
Ensembl
Drosophila melanogaster
7227
BDGP5
FASTA DNA sequence for Drosophila melanogaster
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/drosophila_melanogaster/dna/Drosophila_melanogaster.BDGP5.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/drosophila_melanogaster/dna/Drosophila_melanogaster.BDGP5.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/drosophila_melanogaster/dna/Drosophila_melanogaster.BDGP5.69.dna.toplevel.fa.gz
FASTA
Drosophila_melanogaster.BDGP5.69.dna_rm.toplevel.fa
Ensembl
Drosophila melanogaster
7227
BDGP5
FASTA DNA sequence for Drosophila melanogaster
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/drosophila_melanogaster/dna/Drosophila_melanogaster.BDGP5.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/drosophila_melanogaster/dna/Drosophila_melanogaster.BDGP5.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/drosophila_melanogaster/dna/Drosophila_melanogaster.BDGP5.69.dna_rm.toplevel.fa.gz
FASTA
Drosophila_melanogaster.BDGP5.69.dna_sm.toplevel.fa
Ensembl
Drosophila melanogaster
7227
BDGP5
FASTA DNA sequence for Drosophila melanogaster
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/drosophila_melanogaster/dna/Drosophila_melanogaster.BDGP5.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/drosophila_melanogaster/dna/Drosophila_melanogaster.BDGP5.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/drosophila_melanogaster/dna/Drosophila_melanogaster.BDGP5.69.dna_sm.toplevel.fa.gz
FASTA
Drosophila_melanogaster.BDGP5.69.ncrna.fa
Ensembl
Drosophila melanogaster
7227
BDGP5
FASTA ncRNA sequence for Drosophila melanogaster
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/drosophila_melanogaster/ncrna/Drosophila_melanogaster.BDGP5.69.ncrna.fa.rz, ensembl/release-69/fasta/drosophila_melanogaster/ncrna/Drosophila_melanogaster.BDGP5.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/drosophila_melanogaster/ncrna/Drosophila_melanogaster.BDGP5.69.ncrna.fa.gz
FASTA
Drosophila_melanogaster.BDGP5.69.pep.all.fa
Ensembl
Drosophila melanogaster
7227
BDGP5
FASTA pep sequence for Drosophila melanogaster
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/drosophila_melanogaster/pep/Drosophila_melanogaster.BDGP5.69.pep.all.fa.rz, ensembl/release-69/fasta/drosophila_melanogaster/pep/Drosophila_melanogaster.BDGP5.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/drosophila_melanogaster/pep/Drosophila_melanogaster.BDGP5.69.pep.all.fa.gz
FASTA
Echinops_telfairi.TENREC.69.cdna.all.fa
Ensembl
Echinops telfairi
9371
TENREC
FASTA cDNA sequence for Echinops telfairi
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/echinops_telfairi/cdna/Echinops_telfairi.TENREC.69.cdna.all.fa.rz, ensembl/release-69/fasta/echinops_telfairi/cdna/Echinops_telfairi.TENREC.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/echinops_telfairi/cdna/Echinops_telfairi.TENREC.69.cdna.all.fa.gz
FASTA
Echinops_telfairi.TENREC.69.dna.toplevel.fa
Ensembl
Echinops telfairi
9371
TENREC
FASTA DNA sequence for Echinops telfairi
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/echinops_telfairi/dna/Echinops_telfairi.TENREC.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/echinops_telfairi/dna/Echinops_telfairi.TENREC.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/echinops_telfairi/dna/Echinops_telfairi.TENREC.69.dna.toplevel.fa.gz
FASTA
Echinops_telfairi.TENREC.69.dna_rm.toplevel.fa
Ensembl
Echinops telfairi
9371
TENREC
FASTA DNA sequence for Echinops telfairi
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/echinops_telfairi/dna/Echinops_telfairi.TENREC.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/echinops_telfairi/dna/Echinops_telfairi.TENREC.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/echinops_telfairi/dna/Echinops_telfairi.TENREC.69.dna_rm.toplevel.fa.gz
FASTA
Echinops_telfairi.TENREC.69.dna_sm.toplevel.fa
Ensembl
Echinops telfairi
9371
TENREC
FASTA DNA sequence for Echinops telfairi
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/echinops_telfairi/dna/Echinops_telfairi.TENREC.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/echinops_telfairi/dna/Echinops_telfairi.TENREC.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/echinops_telfairi/dna/Echinops_telfairi.TENREC.69.dna_sm.toplevel.fa.gz
FASTA
Echinops_telfairi.TENREC.69.ncrna.fa
Ensembl
Echinops telfairi
9371
TENREC
FASTA ncRNA sequence for Echinops telfairi
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/echinops_telfairi/ncrna/Echinops_telfairi.TENREC.69.ncrna.fa.rz, ensembl/release-69/fasta/echinops_telfairi/ncrna/Echinops_telfairi.TENREC.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/echinops_telfairi/ncrna/Echinops_telfairi.TENREC.69.ncrna.fa.gz
FASTA
Echinops_telfairi.TENREC.69.pep.all.fa
Ensembl
Echinops telfairi
9371
TENREC
FASTA pep sequence for Echinops telfairi
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/echinops_telfairi/pep/Echinops_telfairi.TENREC.69.pep.all.fa.rz, ensembl/release-69/fasta/echinops_telfairi/pep/Echinops_telfairi.TENREC.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/echinops_telfairi/pep/Echinops_telfairi.TENREC.69.pep.all.fa.gz
FASTA
Equus_caballus.EquCab2.69.cdna.all.fa
Ensembl
Equus caballus
9796
EquCab2
FASTA cDNA sequence for Equus caballus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/equus_caballus/cdna/Equus_caballus.EquCab2.69.cdna.all.fa.rz, ensembl/release-69/fasta/equus_caballus/cdna/Equus_caballus.EquCab2.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/equus_caballus/cdna/Equus_caballus.EquCab2.69.cdna.all.fa.gz
FASTA
Equus_caballus.EquCab2.69.dna.toplevel.fa
Ensembl
Equus caballus
9796
EquCab2
FASTA DNA sequence for Equus caballus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/equus_caballus/dna/Equus_caballus.EquCab2.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/equus_caballus/dna/Equus_caballus.EquCab2.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/equus_caballus/dna/Equus_caballus.EquCab2.69.dna.toplevel.fa.gz
FASTA
Equus_caballus.EquCab2.69.dna_rm.toplevel.fa
Ensembl
Equus caballus
9796
EquCab2
FASTA DNA sequence for Equus caballus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/equus_caballus/dna/Equus_caballus.EquCab2.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/equus_caballus/dna/Equus_caballus.EquCab2.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/equus_caballus/dna/Equus_caballus.EquCab2.69.dna_rm.toplevel.fa.gz
FASTA
Equus_caballus.EquCab2.69.dna_sm.toplevel.fa
Ensembl
Equus caballus
9796
EquCab2
FASTA DNA sequence for Equus caballus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/equus_caballus/dna/Equus_caballus.EquCab2.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/equus_caballus/dna/Equus_caballus.EquCab2.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/equus_caballus/dna/Equus_caballus.EquCab2.69.dna_sm.toplevel.fa.gz
FASTA
Equus_caballus.EquCab2.69.ncrna.fa
Ensembl
Equus caballus
9796
EquCab2
FASTA ncRNA sequence for Equus caballus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/equus_caballus/ncrna/Equus_caballus.EquCab2.69.ncrna.fa.rz, ensembl/release-69/fasta/equus_caballus/ncrna/Equus_caballus.EquCab2.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/equus_caballus/ncrna/Equus_caballus.EquCab2.69.ncrna.fa.gz
FASTA
Equus_caballus.EquCab2.69.pep.all.fa
Ensembl
Equus caballus
9796
EquCab2
FASTA pep sequence for Equus caballus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/equus_caballus/pep/Equus_caballus.EquCab2.69.pep.all.fa.rz, ensembl/release-69/fasta/equus_caballus/pep/Equus_caballus.EquCab2.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/equus_caballus/pep/Equus_caballus.EquCab2.69.pep.all.fa.gz
FASTA
Erinaceus_europaeus.HEDGEHOG.69.cdna.all.fa
Ensembl
Erinaceus europaeus
9365
HEDGEHOG
FASTA cDNA sequence for Erinaceus europaeus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/erinaceus_europaeus/cdna/Erinaceus_europaeus.HEDGEHOG.69.cdna.all.fa.rz, ensembl/release-69/fasta/erinaceus_europaeus/cdna/Erinaceus_europaeus.HEDGEHOG.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/erinaceus_europaeus/cdna/Erinaceus_europaeus.HEDGEHOG.69.cdna.all.fa.gz
FASTA
Erinaceus_europaeus.HEDGEHOG.69.dna.toplevel.fa
Ensembl
Erinaceus europaeus
9365
HEDGEHOG
FASTA DNA sequence for Erinaceus europaeus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/erinaceus_europaeus/dna/Erinaceus_europaeus.HEDGEHOG.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/erinaceus_europaeus/dna/Erinaceus_europaeus.HEDGEHOG.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/erinaceus_europaeus/dna/Erinaceus_europaeus.HEDGEHOG.69.dna.toplevel.fa.gz
FASTA
Erinaceus_europaeus.HEDGEHOG.69.dna_rm.toplevel.fa
Ensembl
Erinaceus europaeus
9365
HEDGEHOG
FASTA DNA sequence for Erinaceus europaeus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/erinaceus_europaeus/dna/Erinaceus_europaeus.HEDGEHOG.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/erinaceus_europaeus/dna/Erinaceus_europaeus.HEDGEHOG.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/erinaceus_europaeus/dna/Erinaceus_europaeus.HEDGEHOG.69.dna_rm.toplevel.fa.gz
FASTA
Erinaceus_europaeus.HEDGEHOG.69.dna_sm.toplevel.fa
Ensembl
Erinaceus europaeus
9365
HEDGEHOG
FASTA DNA sequence for Erinaceus europaeus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/erinaceus_europaeus/dna/Erinaceus_europaeus.HEDGEHOG.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/erinaceus_europaeus/dna/Erinaceus_europaeus.HEDGEHOG.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/erinaceus_europaeus/dna/Erinaceus_europaeus.HEDGEHOG.69.dna_sm.toplevel.fa.gz
FASTA
Erinaceus_europaeus.HEDGEHOG.69.ncrna.fa
Ensembl
Erinaceus europaeus
9365
HEDGEHOG
FASTA ncRNA sequence for Erinaceus europaeus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/erinaceus_europaeus/ncrna/Erinaceus_europaeus.HEDGEHOG.69.ncrna.fa.rz, ensembl/release-69/fasta/erinaceus_europaeus/ncrna/Erinaceus_europaeus.HEDGEHOG.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/erinaceus_europaeus/ncrna/Erinaceus_europaeus.HEDGEHOG.69.ncrna.fa.gz
FASTA
Erinaceus_europaeus.HEDGEHOG.69.pep.all.fa
Ensembl
Erinaceus europaeus
9365
HEDGEHOG
FASTA pep sequence for Erinaceus europaeus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/erinaceus_europaeus/pep/Erinaceus_europaeus.HEDGEHOG.69.pep.all.fa.rz, ensembl/release-69/fasta/erinaceus_europaeus/pep/Erinaceus_europaeus.HEDGEHOG.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/erinaceus_europaeus/pep/Erinaceus_europaeus.HEDGEHOG.69.pep.all.fa.gz
FASTA
Felis_catus.CAT.69.cdna.all.fa
Ensembl
Felis catus
9685
CAT
FASTA cDNA sequence for Felis catus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/felis_catus/cdna/Felis_catus.CAT.69.cdna.all.fa.rz, ensembl/release-69/fasta/felis_catus/cdna/Felis_catus.CAT.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/felis_catus/cdna/Felis_catus.CAT.69.cdna.all.fa.gz
FASTA
Felis_catus.CAT.69.dna.toplevel.fa
Ensembl
Felis catus
9685
CAT
FASTA DNA sequence for Felis catus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/felis_catus/dna/Felis_catus.CAT.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/felis_catus/dna/Felis_catus.CAT.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/felis_catus/dna/Felis_catus.CAT.69.dna.toplevel.fa.gz
FASTA
Felis_catus.CAT.69.dna_rm.toplevel.fa
Ensembl
Felis catus
9685
CAT
FASTA DNA sequence for Felis catus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/felis_catus/dna/Felis_catus.CAT.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/felis_catus/dna/Felis_catus.CAT.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/felis_catus/dna/Felis_catus.CAT.69.dna_rm.toplevel.fa.gz
FASTA
Felis_catus.CAT.69.dna_sm.toplevel.fa
Ensembl
Felis catus
9685
CAT
FASTA DNA sequence for Felis catus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/felis_catus/dna/Felis_catus.CAT.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/felis_catus/dna/Felis_catus.CAT.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/felis_catus/dna/Felis_catus.CAT.69.dna_sm.toplevel.fa.gz
FASTA
Felis_catus.CAT.69.ncrna.fa
Ensembl
Felis catus
9685
CAT
FASTA ncRNA sequence for Felis catus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/felis_catus/ncrna/Felis_catus.CAT.69.ncrna.fa.rz, ensembl/release-69/fasta/felis_catus/ncrna/Felis_catus.CAT.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/felis_catus/ncrna/Felis_catus.CAT.69.ncrna.fa.gz
FASTA
Felis_catus.CAT.69.pep.all.fa
Ensembl
Felis catus
9685
CAT
FASTA pep sequence for Felis catus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/felis_catus/pep/Felis_catus.CAT.69.pep.all.fa.rz, ensembl/release-69/fasta/felis_catus/pep/Felis_catus.CAT.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/felis_catus/pep/Felis_catus.CAT.69.pep.all.fa.gz
FASTA
Gadus_morhua.gadMor1.69.cdna.all.fa
Ensembl
Gadus morhua
8049
gadMor1
FASTA cDNA sequence for Gadus morhua
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/gadus_morhua/cdna/Gadus_morhua.gadMor1.69.cdna.all.fa.rz, ensembl/release-69/fasta/gadus_morhua/cdna/Gadus_morhua.gadMor1.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/gadus_morhua/cdna/Gadus_morhua.gadMor1.69.cdna.all.fa.gz
FASTA
Gadus_morhua.gadMor1.69.dna.toplevel.fa
Ensembl
Gadus morhua
8049
gadMor1
FASTA DNA sequence for Gadus morhua
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/gadus_morhua/dna/Gadus_morhua.gadMor1.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/gadus_morhua/dna/Gadus_morhua.gadMor1.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/gadus_morhua/dna/Gadus_morhua.gadMor1.69.dna.toplevel.fa.gz
FASTA
Gadus_morhua.gadMor1.69.dna_rm.toplevel.fa
Ensembl
Gadus morhua
8049
gadMor1
FASTA DNA sequence for Gadus morhua
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/gadus_morhua/dna/Gadus_morhua.gadMor1.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/gadus_morhua/dna/Gadus_morhua.gadMor1.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/gadus_morhua/dna/Gadus_morhua.gadMor1.69.dna_rm.toplevel.fa.gz
FASTA
Gadus_morhua.gadMor1.69.dna_sm.toplevel.fa
Ensembl
Gadus morhua
8049
gadMor1
FASTA DNA sequence for Gadus morhua
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/gadus_morhua/dna/Gadus_morhua.gadMor1.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/gadus_morhua/dna/Gadus_morhua.gadMor1.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/gadus_morhua/dna/Gadus_morhua.gadMor1.69.dna_sm.toplevel.fa.gz
FASTA
Gadus_morhua.gadMor1.69.ncrna.fa
Ensembl
Gadus morhua
8049
gadMor1
FASTA ncRNA sequence for Gadus morhua
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/gadus_morhua/ncrna/Gadus_morhua.gadMor1.69.ncrna.fa.rz, ensembl/release-69/fasta/gadus_morhua/ncrna/Gadus_morhua.gadMor1.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/gadus_morhua/ncrna/Gadus_morhua.gadMor1.69.ncrna.fa.gz
FASTA
Gadus_morhua.gadMor1.69.pep.all.fa
Ensembl
Gadus morhua
8049
gadMor1
FASTA pep sequence for Gadus morhua
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/gadus_morhua/pep/Gadus_morhua.gadMor1.69.pep.all.fa.rz, ensembl/release-69/fasta/gadus_morhua/pep/Gadus_morhua.gadMor1.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/gadus_morhua/pep/Gadus_morhua.gadMor1.69.pep.all.fa.gz
FASTA
Gallus_gallus.WASHUC2.69.cdna.all.fa
Ensembl
Gallus gallus
9031
WASHUC2
FASTA cDNA sequence for Gallus gallus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/gallus_gallus/cdna/Gallus_gallus.WASHUC2.69.cdna.all.fa.rz, ensembl/release-69/fasta/gallus_gallus/cdna/Gallus_gallus.WASHUC2.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/gallus_gallus/cdna/Gallus_gallus.WASHUC2.69.cdna.all.fa.gz
FASTA
Gallus_gallus.WASHUC2.69.dna.toplevel.fa
Ensembl
Gallus gallus
9031
WASHUC2
FASTA DNA sequence for Gallus gallus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/gallus_gallus/dna/Gallus_gallus.WASHUC2.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/gallus_gallus/dna/Gallus_gallus.WASHUC2.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/gallus_gallus/dna/Gallus_gallus.WASHUC2.69.dna.toplevel.fa.gz
FASTA
Gallus_gallus.WASHUC2.69.dna_rm.toplevel.fa
Ensembl
Gallus gallus
9031
WASHUC2
FASTA DNA sequence for Gallus gallus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/gallus_gallus/dna/Gallus_gallus.WASHUC2.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/gallus_gallus/dna/Gallus_gallus.WASHUC2.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/gallus_gallus/dna/Gallus_gallus.WASHUC2.69.dna_rm.toplevel.fa.gz
FASTA
Gallus_gallus.WASHUC2.69.dna_sm.toplevel.fa
Ensembl
Gallus gallus
9031
WASHUC2
FASTA DNA sequence for Gallus gallus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/gallus_gallus/dna/Gallus_gallus.WASHUC2.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/gallus_gallus/dna/Gallus_gallus.WASHUC2.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/gallus_gallus/dna/Gallus_gallus.WASHUC2.69.dna_sm.toplevel.fa.gz
FASTA
Gallus_gallus.WASHUC2.69.ncrna.fa
Ensembl
Gallus gallus
9031
WASHUC2
FASTA ncRNA sequence for Gallus gallus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/gallus_gallus/ncrna/Gallus_gallus.WASHUC2.69.ncrna.fa.rz, ensembl/release-69/fasta/gallus_gallus/ncrna/Gallus_gallus.WASHUC2.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/gallus_gallus/ncrna/Gallus_gallus.WASHUC2.69.ncrna.fa.gz
FASTA
Gallus_gallus.WASHUC2.69.pep.all.fa
Ensembl
Gallus gallus
9031
WASHUC2
FASTA pep sequence for Gallus gallus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/gallus_gallus/pep/Gallus_gallus.WASHUC2.69.pep.all.fa.rz, ensembl/release-69/fasta/gallus_gallus/pep/Gallus_gallus.WASHUC2.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/gallus_gallus/pep/Gallus_gallus.WASHUC2.69.pep.all.fa.gz
FASTA
Gasterosteus_aculeatus.BROADS1.69.cdna.all.fa
Ensembl
Gasterosteus aculeatus
69293
BROADS1
FASTA cDNA sequence for Gasterosteus aculeatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/gasterosteus_aculeatus/cdna/Gasterosteus_aculeatus.BROADS1.69.cdna.all.fa.rz, ensembl/release-69/fasta/gasterosteus_aculeatus/cdna/Gasterosteus_aculeatus.BROADS1.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/gasterosteus_aculeatus/cdna/Gasterosteus_aculeatus.BROADS1.69.cdna.all.fa.gz
FASTA
Gasterosteus_aculeatus.BROADS1.69.dna.toplevel.fa
Ensembl
Gasterosteus aculeatus
69293
BROADS1
FASTA DNA sequence for Gasterosteus aculeatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/gasterosteus_aculeatus/dna/Gasterosteus_aculeatus.BROADS1.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/gasterosteus_aculeatus/dna/Gasterosteus_aculeatus.BROADS1.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/gasterosteus_aculeatus/dna/Gasterosteus_aculeatus.BROADS1.69.dna.toplevel.fa.gz
FASTA
Gasterosteus_aculeatus.BROADS1.69.dna_rm.toplevel.fa
Ensembl
Gasterosteus aculeatus
69293
BROADS1
FASTA DNA sequence for Gasterosteus aculeatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/gasterosteus_aculeatus/dna/Gasterosteus_aculeatus.BROADS1.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/gasterosteus_aculeatus/dna/Gasterosteus_aculeatus.BROADS1.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/gasterosteus_aculeatus/dna/Gasterosteus_aculeatus.BROADS1.69.dna_rm.toplevel.fa.gz
FASTA
Gasterosteus_aculeatus.BROADS1.69.dna_sm.toplevel.fa
Ensembl
Gasterosteus aculeatus
69293
BROADS1
FASTA DNA sequence for Gasterosteus aculeatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/gasterosteus_aculeatus/dna/Gasterosteus_aculeatus.BROADS1.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/gasterosteus_aculeatus/dna/Gasterosteus_aculeatus.BROADS1.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/gasterosteus_aculeatus/dna/Gasterosteus_aculeatus.BROADS1.69.dna_sm.toplevel.fa.gz
FASTA
Gasterosteus_aculeatus.BROADS1.69.ncrna.fa
Ensembl
Gasterosteus aculeatus
69293
BROADS1
FASTA ncRNA sequence for Gasterosteus aculeatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/gasterosteus_aculeatus/ncrna/Gasterosteus_aculeatus.BROADS1.69.ncrna.fa.rz, ensembl/release-69/fasta/gasterosteus_aculeatus/ncrna/Gasterosteus_aculeatus.BROADS1.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/gasterosteus_aculeatus/ncrna/Gasterosteus_aculeatus.BROADS1.69.ncrna.fa.gz
FASTA
Gasterosteus_aculeatus.BROADS1.69.pep.all.fa
Ensembl
Gasterosteus aculeatus
69293
BROADS1
FASTA pep sequence for Gasterosteus aculeatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/gasterosteus_aculeatus/pep/Gasterosteus_aculeatus.BROADS1.69.pep.all.fa.rz, ensembl/release-69/fasta/gasterosteus_aculeatus/pep/Gasterosteus_aculeatus.BROADS1.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/gasterosteus_aculeatus/pep/Gasterosteus_aculeatus.BROADS1.69.pep.all.fa.gz
FASTA
Gorilla_gorilla.gorGor3.1.69.cdna.all.fa
Ensembl
Gorilla gorilla
9593
gorGor3.1
FASTA cDNA sequence for Gorilla gorilla
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/gorilla_gorilla/cdna/Gorilla_gorilla.gorGor3.1.69.cdna.all.fa.rz, ensembl/release-69/fasta/gorilla_gorilla/cdna/Gorilla_gorilla.gorGor3.1.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/gorilla_gorilla/cdna/Gorilla_gorilla.gorGor3.1.69.cdna.all.fa.gz
FASTA
Gorilla_gorilla.gorGor3.1.69.dna.toplevel.fa
Ensembl
Gorilla gorilla
9593
gorGor3.1
FASTA DNA sequence for Gorilla gorilla
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/gorilla_gorilla/dna/Gorilla_gorilla.gorGor3.1.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/gorilla_gorilla/dna/Gorilla_gorilla.gorGor3.1.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/gorilla_gorilla/dna/Gorilla_gorilla.gorGor3.1.69.dna.toplevel.fa.gz
FASTA
Gorilla_gorilla.gorGor3.1.69.dna_rm.toplevel.fa
Ensembl
Gorilla gorilla
9593
gorGor3.1
FASTA DNA sequence for Gorilla gorilla
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/gorilla_gorilla/dna/Gorilla_gorilla.gorGor3.1.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/gorilla_gorilla/dna/Gorilla_gorilla.gorGor3.1.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/gorilla_gorilla/dna/Gorilla_gorilla.gorGor3.1.69.dna_rm.toplevel.fa.gz
FASTA
Gorilla_gorilla.gorGor3.1.69.dna_sm.toplevel.fa
Ensembl
Gorilla gorilla
9593
gorGor3.1
FASTA DNA sequence for Gorilla gorilla
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/gorilla_gorilla/dna/Gorilla_gorilla.gorGor3.1.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/gorilla_gorilla/dna/Gorilla_gorilla.gorGor3.1.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/gorilla_gorilla/dna/Gorilla_gorilla.gorGor3.1.69.dna_sm.toplevel.fa.gz
FASTA
Gorilla_gorilla.gorGor3.1.69.ncrna.fa
Ensembl
Gorilla gorilla
9593
gorGor3.1
FASTA ncRNA sequence for Gorilla gorilla
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/gorilla_gorilla/ncrna/Gorilla_gorilla.gorGor3.1.69.ncrna.fa.rz, ensembl/release-69/fasta/gorilla_gorilla/ncrna/Gorilla_gorilla.gorGor3.1.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/gorilla_gorilla/ncrna/Gorilla_gorilla.gorGor3.1.69.ncrna.fa.gz
FASTA
Gorilla_gorilla.gorGor3.1.69.pep.all.fa
Ensembl
Gorilla gorilla
9593
gorGor3.1
FASTA pep sequence for Gorilla gorilla
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/gorilla_gorilla/pep/Gorilla_gorilla.gorGor3.1.69.pep.all.fa.rz, ensembl/release-69/fasta/gorilla_gorilla/pep/Gorilla_gorilla.gorGor3.1.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/gorilla_gorilla/pep/Gorilla_gorilla.gorGor3.1.69.pep.all.fa.gz
FASTA
Homo_sapiens.GRCh37.69.cdna.all.fa
Ensembl
Homo sapiens
9606
GRCh37
FASTA cDNA sequence for Homo sapiens
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/homo_sapiens/cdna/Homo_sapiens.GRCh37.69.cdna.all.fa.rz, ensembl/release-69/fasta/homo_sapiens/cdna/Homo_sapiens.GRCh37.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/homo_sapiens/cdna/Homo_sapiens.GRCh37.69.cdna.all.fa.gz
FASTA
Homo_sapiens.GRCh37.69.dna.toplevel.fa
Ensembl
Homo sapiens
9606
GRCh37
FASTA DNA sequence for Homo sapiens
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/homo_sapiens/dna/Homo_sapiens.GRCh37.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/homo_sapiens/dna/Homo_sapiens.GRCh37.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/homo_sapiens/dna/Homo_sapiens.GRCh37.69.dna.toplevel.fa.gz
FASTA
Homo_sapiens.GRCh37.69.dna_rm.toplevel.fa
Ensembl
Homo sapiens
9606
GRCh37
FASTA DNA sequence for Homo sapiens
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/homo_sapiens/dna/Homo_sapiens.GRCh37.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/homo_sapiens/dna/Homo_sapiens.GRCh37.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/homo_sapiens/dna/Homo_sapiens.GRCh37.69.dna_rm.toplevel.fa.gz
FASTA
Homo_sapiens.GRCh37.69.dna_sm.toplevel.fa
Ensembl
Homo sapiens
9606
GRCh37
FASTA DNA sequence for Homo sapiens
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/homo_sapiens/dna/Homo_sapiens.GRCh37.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/homo_sapiens/dna/Homo_sapiens.GRCh37.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/homo_sapiens/dna/Homo_sapiens.GRCh37.69.dna_sm.toplevel.fa.gz
FASTA
Homo_sapiens.GRCh37.69.ncrna.fa
Ensembl
Homo sapiens
9606
GRCh37
FASTA ncRNA sequence for Homo sapiens
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/homo_sapiens/ncrna/Homo_sapiens.GRCh37.69.ncrna.fa.rz, ensembl/release-69/fasta/homo_sapiens/ncrna/Homo_sapiens.GRCh37.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/homo_sapiens/ncrna/Homo_sapiens.GRCh37.69.ncrna.fa.gz
FASTA
Homo_sapiens.GRCh37.69.pep.all.fa
Ensembl
Homo sapiens
9606
GRCh37
FASTA pep sequence for Homo sapiens
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/homo_sapiens/pep/Homo_sapiens.GRCh37.69.pep.all.fa.rz, ensembl/release-69/fasta/homo_sapiens/pep/Homo_sapiens.GRCh37.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/homo_sapiens/pep/Homo_sapiens.GRCh37.69.pep.all.fa.gz
FASTA
Ictidomys_tridecemlineatus.spetri2.69.cdna.all.fa
Ensembl
Ictidomys tridecemlineatus
43179
spetri2
FASTA cDNA sequence for Ictidomys tridecemlineatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ictidomys_tridecemlineatus/cdna/Ictidomys_tridecemlineatus.spetri2.69.cdna.all.fa.rz, ensembl/release-69/fasta/ictidomys_tridecemlineatus/cdna/Ictidomys_tridecemlineatus.spetri2.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ictidomys_tridecemlineatus/cdna/Ictidomys_tridecemlineatus.spetri2.69.cdna.all.fa.gz
FASTA
Ictidomys_tridecemlineatus.spetri2.69.dna.toplevel.fa
Ensembl
Ictidomys tridecemlineatus
43179
spetri2
FASTA DNA sequence for Ictidomys tridecemlineatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ictidomys_tridecemlineatus/dna/Ictidomys_tridecemlineatus.spetri2.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/ictidomys_tridecemlineatus/dna/Ictidomys_tridecemlineatus.spetri2.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ictidomys_tridecemlineatus/dna/Ictidomys_tridecemlineatus.spetri2.69.dna.toplevel.fa.gz
FASTA
Ictidomys_tridecemlineatus.spetri2.69.dna_rm.toplevel.fa
Ensembl
Ictidomys tridecemlineatus
43179
spetri2
FASTA DNA sequence for Ictidomys tridecemlineatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ictidomys_tridecemlineatus/dna/Ictidomys_tridecemlineatus.spetri2.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/ictidomys_tridecemlineatus/dna/Ictidomys_tridecemlineatus.spetri2.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ictidomys_tridecemlineatus/dna/Ictidomys_tridecemlineatus.spetri2.69.dna_rm.toplevel.fa.gz
FASTA
Ictidomys_tridecemlineatus.spetri2.69.dna_sm.toplevel.fa
Ensembl
Ictidomys tridecemlineatus
43179
spetri2
FASTA DNA sequence for Ictidomys tridecemlineatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ictidomys_tridecemlineatus/dna/Ictidomys_tridecemlineatus.spetri2.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/ictidomys_tridecemlineatus/dna/Ictidomys_tridecemlineatus.spetri2.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ictidomys_tridecemlineatus/dna/Ictidomys_tridecemlineatus.spetri2.69.dna_sm.toplevel.fa.gz
FASTA
Ictidomys_tridecemlineatus.spetri2.69.ncrna.fa
Ensembl
Ictidomys tridecemlineatus
43179
spetri2
FASTA ncRNA sequence for Ictidomys tridecemlineatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ictidomys_tridecemlineatus/ncrna/Ictidomys_tridecemlineatus.spetri2.69.ncrna.fa.rz, ensembl/release-69/fasta/ictidomys_tridecemlineatus/ncrna/Ictidomys_tridecemlineatus.spetri2.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ictidomys_tridecemlineatus/ncrna/Ictidomys_tridecemlineatus.spetri2.69.ncrna.fa.gz
FASTA
Ictidomys_tridecemlineatus.spetri2.69.pep.all.fa
Ensembl
Ictidomys tridecemlineatus
43179
spetri2
FASTA pep sequence for Ictidomys tridecemlineatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ictidomys_tridecemlineatus/pep/Ictidomys_tridecemlineatus.spetri2.69.pep.all.fa.rz, ensembl/release-69/fasta/ictidomys_tridecemlineatus/pep/Ictidomys_tridecemlineatus.spetri2.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ictidomys_tridecemlineatus/pep/Ictidomys_tridecemlineatus.spetri2.69.pep.all.fa.gz
FASTA
Latimeria_chalumnae.LatCha1.69.cdna.all.fa
Ensembl
Latimeria chalumnae
7897
LatCha1
FASTA cDNA sequence for Latimeria chalumnae
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/latimeria_chalumnae/cdna/Latimeria_chalumnae.LatCha1.69.cdna.all.fa.rz, ensembl/release-69/fasta/latimeria_chalumnae/cdna/Latimeria_chalumnae.LatCha1.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/latimeria_chalumnae/cdna/Latimeria_chalumnae.LatCha1.69.cdna.all.fa.gz
FASTA
Latimeria_chalumnae.LatCha1.69.dna.toplevel.fa
Ensembl
Latimeria chalumnae
7897
LatCha1
FASTA DNA sequence for Latimeria chalumnae
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/latimeria_chalumnae/dna/Latimeria_chalumnae.LatCha1.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/latimeria_chalumnae/dna/Latimeria_chalumnae.LatCha1.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/latimeria_chalumnae/dna/Latimeria_chalumnae.LatCha1.69.dna.toplevel.fa.gz
FASTA
Latimeria_chalumnae.LatCha1.69.dna_rm.toplevel.fa
Ensembl
Latimeria chalumnae
7897
LatCha1
FASTA DNA sequence for Latimeria chalumnae
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/latimeria_chalumnae/dna/Latimeria_chalumnae.LatCha1.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/latimeria_chalumnae/dna/Latimeria_chalumnae.LatCha1.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/latimeria_chalumnae/dna/Latimeria_chalumnae.LatCha1.69.dna_rm.toplevel.fa.gz
FASTA
Latimeria_chalumnae.LatCha1.69.dna_sm.toplevel.fa
Ensembl
Latimeria chalumnae
7897
LatCha1
FASTA DNA sequence for Latimeria chalumnae
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/latimeria_chalumnae/dna/Latimeria_chalumnae.LatCha1.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/latimeria_chalumnae/dna/Latimeria_chalumnae.LatCha1.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/latimeria_chalumnae/dna/Latimeria_chalumnae.LatCha1.69.dna_sm.toplevel.fa.gz
FASTA
Latimeria_chalumnae.LatCha1.69.ncrna.fa
Ensembl
Latimeria chalumnae
7897
LatCha1
FASTA ncRNA sequence for Latimeria chalumnae
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/latimeria_chalumnae/ncrna/Latimeria_chalumnae.LatCha1.69.ncrna.fa.rz, ensembl/release-69/fasta/latimeria_chalumnae/ncrna/Latimeria_chalumnae.LatCha1.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/latimeria_chalumnae/ncrna/Latimeria_chalumnae.LatCha1.69.ncrna.fa.gz
FASTA
Latimeria_chalumnae.LatCha1.69.pep.all.fa
Ensembl
Latimeria chalumnae
7897
LatCha1
FASTA pep sequence for Latimeria chalumnae
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/latimeria_chalumnae/pep/Latimeria_chalumnae.LatCha1.69.pep.all.fa.rz, ensembl/release-69/fasta/latimeria_chalumnae/pep/Latimeria_chalumnae.LatCha1.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/latimeria_chalumnae/pep/Latimeria_chalumnae.LatCha1.69.pep.all.fa.gz
FASTA
Loxodonta_africana.loxAfr3.69.cdna.all.fa
Ensembl
Loxodonta africana
9785
loxAfr3
FASTA cDNA sequence for Loxodonta africana
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/loxodonta_africana/cdna/Loxodonta_africana.loxAfr3.69.cdna.all.fa.rz, ensembl/release-69/fasta/loxodonta_africana/cdna/Loxodonta_africana.loxAfr3.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/loxodonta_africana/cdna/Loxodonta_africana.loxAfr3.69.cdna.all.fa.gz
FASTA
Loxodonta_africana.loxAfr3.69.dna.toplevel.fa
Ensembl
Loxodonta africana
9785
loxAfr3
FASTA DNA sequence for Loxodonta africana
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/loxodonta_africana/dna/Loxodonta_africana.loxAfr3.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/loxodonta_africana/dna/Loxodonta_africana.loxAfr3.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/loxodonta_africana/dna/Loxodonta_africana.loxAfr3.69.dna.toplevel.fa.gz
FASTA
Loxodonta_africana.loxAfr3.69.dna_rm.toplevel.fa
Ensembl
Loxodonta africana
9785
loxAfr3
FASTA DNA sequence for Loxodonta africana
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/loxodonta_africana/dna/Loxodonta_africana.loxAfr3.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/loxodonta_africana/dna/Loxodonta_africana.loxAfr3.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/loxodonta_africana/dna/Loxodonta_africana.loxAfr3.69.dna_rm.toplevel.fa.gz
FASTA
Loxodonta_africana.loxAfr3.69.dna_sm.toplevel.fa
Ensembl
Loxodonta africana
9785
loxAfr3
FASTA DNA sequence for Loxodonta africana
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/loxodonta_africana/dna/Loxodonta_africana.loxAfr3.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/loxodonta_africana/dna/Loxodonta_africana.loxAfr3.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/loxodonta_africana/dna/Loxodonta_africana.loxAfr3.69.dna_sm.toplevel.fa.gz
FASTA
Loxodonta_africana.loxAfr3.69.ncrna.fa
Ensembl
Loxodonta africana
9785
loxAfr3
FASTA ncRNA sequence for Loxodonta africana
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/loxodonta_africana/ncrna/Loxodonta_africana.loxAfr3.69.ncrna.fa.rz, ensembl/release-69/fasta/loxodonta_africana/ncrna/Loxodonta_africana.loxAfr3.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/loxodonta_africana/ncrna/Loxodonta_africana.loxAfr3.69.ncrna.fa.gz
FASTA
Loxodonta_africana.loxAfr3.69.pep.all.fa
Ensembl
Loxodonta africana
9785
loxAfr3
FASTA pep sequence for Loxodonta africana
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/loxodonta_africana/pep/Loxodonta_africana.loxAfr3.69.pep.all.fa.rz, ensembl/release-69/fasta/loxodonta_africana/pep/Loxodonta_africana.loxAfr3.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/loxodonta_africana/pep/Loxodonta_africana.loxAfr3.69.pep.all.fa.gz
FASTA
Macaca_mulatta.MMUL_1.69.cdna.all.fa
Ensembl
Macaca mulatta
9544
MMUL_1
FASTA cDNA sequence for Macaca mulatta
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/macaca_mulatta/cdna/Macaca_mulatta.MMUL_1.69.cdna.all.fa.rz, ensembl/release-69/fasta/macaca_mulatta/cdna/Macaca_mulatta.MMUL_1.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/macaca_mulatta/cdna/Macaca_mulatta.MMUL_1.69.cdna.all.fa.gz
FASTA
Macaca_mulatta.MMUL_1.69.dna.toplevel.fa
Ensembl
Macaca mulatta
9544
MMUL_1
FASTA DNA sequence for Macaca mulatta
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/macaca_mulatta/dna/Macaca_mulatta.MMUL_1.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/macaca_mulatta/dna/Macaca_mulatta.MMUL_1.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/macaca_mulatta/dna/Macaca_mulatta.MMUL_1.69.dna.toplevel.fa.gz
FASTA
Macaca_mulatta.MMUL_1.69.dna_rm.toplevel.fa
Ensembl
Macaca mulatta
9544
MMUL_1
FASTA DNA sequence for Macaca mulatta
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/macaca_mulatta/dna/Macaca_mulatta.MMUL_1.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/macaca_mulatta/dna/Macaca_mulatta.MMUL_1.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/macaca_mulatta/dna/Macaca_mulatta.MMUL_1.69.dna_rm.toplevel.fa.gz
FASTA
Macaca_mulatta.MMUL_1.69.dna_sm.toplevel.fa
Ensembl
Macaca mulatta
9544
MMUL_1
FASTA DNA sequence for Macaca mulatta
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/macaca_mulatta/dna/Macaca_mulatta.MMUL_1.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/macaca_mulatta/dna/Macaca_mulatta.MMUL_1.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/macaca_mulatta/dna/Macaca_mulatta.MMUL_1.69.dna_sm.toplevel.fa.gz
FASTA
Macaca_mulatta.MMUL_1.69.ncrna.fa
Ensembl
Macaca mulatta
9544
MMUL_1
FASTA ncRNA sequence for Macaca mulatta
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/macaca_mulatta/ncrna/Macaca_mulatta.MMUL_1.69.ncrna.fa.rz, ensembl/release-69/fasta/macaca_mulatta/ncrna/Macaca_mulatta.MMUL_1.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/macaca_mulatta/ncrna/Macaca_mulatta.MMUL_1.69.ncrna.fa.gz
FASTA
Macaca_mulatta.MMUL_1.69.pep.all.fa
Ensembl
Macaca mulatta
9544
MMUL_1
FASTA pep sequence for Macaca mulatta
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/macaca_mulatta/pep/Macaca_mulatta.MMUL_1.69.pep.all.fa.rz, ensembl/release-69/fasta/macaca_mulatta/pep/Macaca_mulatta.MMUL_1.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/macaca_mulatta/pep/Macaca_mulatta.MMUL_1.69.pep.all.fa.gz
FASTA
Macropus_eugenii.Meug_1.0.69.cdna.all.fa
Ensembl
Macropus eugenii
9315
Meug_1.0
FASTA cDNA sequence for Macropus eugenii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/macropus_eugenii/cdna/Macropus_eugenii.Meug_1.0.69.cdna.all.fa.rz, ensembl/release-69/fasta/macropus_eugenii/cdna/Macropus_eugenii.Meug_1.0.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/macropus_eugenii/cdna/Macropus_eugenii.Meug_1.0.69.cdna.all.fa.gz
FASTA
Macropus_eugenii.Meug_1.0.69.dna.toplevel.fa
Ensembl
Macropus eugenii
9315
Meug_1.0
FASTA DNA sequence for Macropus eugenii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/macropus_eugenii/dna/Macropus_eugenii.Meug_1.0.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/macropus_eugenii/dna/Macropus_eugenii.Meug_1.0.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/macropus_eugenii/dna/Macropus_eugenii.Meug_1.0.69.dna.toplevel.fa.gz
FASTA
Macropus_eugenii.Meug_1.0.69.dna_rm.toplevel.fa
Ensembl
Macropus eugenii
9315
Meug_1.0
FASTA DNA sequence for Macropus eugenii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/macropus_eugenii/dna/Macropus_eugenii.Meug_1.0.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/macropus_eugenii/dna/Macropus_eugenii.Meug_1.0.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/macropus_eugenii/dna/Macropus_eugenii.Meug_1.0.69.dna_rm.toplevel.fa.gz
FASTA
Macropus_eugenii.Meug_1.0.69.dna_sm.toplevel.fa
Ensembl
Macropus eugenii
9315
Meug_1.0
FASTA DNA sequence for Macropus eugenii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/macropus_eugenii/dna/Macropus_eugenii.Meug_1.0.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/macropus_eugenii/dna/Macropus_eugenii.Meug_1.0.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/macropus_eugenii/dna/Macropus_eugenii.Meug_1.0.69.dna_sm.toplevel.fa.gz
FASTA
Macropus_eugenii.Meug_1.0.69.ncrna.fa
Ensembl
Macropus eugenii
9315
Meug_1.0
FASTA ncRNA sequence for Macropus eugenii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/macropus_eugenii/ncrna/Macropus_eugenii.Meug_1.0.69.ncrna.fa.rz, ensembl/release-69/fasta/macropus_eugenii/ncrna/Macropus_eugenii.Meug_1.0.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/macropus_eugenii/ncrna/Macropus_eugenii.Meug_1.0.69.ncrna.fa.gz
FASTA
Macropus_eugenii.Meug_1.0.69.pep.all.fa
Ensembl
Macropus eugenii
9315
Meug_1.0
FASTA pep sequence for Macropus eugenii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/macropus_eugenii/pep/Macropus_eugenii.Meug_1.0.69.pep.all.fa.rz, ensembl/release-69/fasta/macropus_eugenii/pep/Macropus_eugenii.Meug_1.0.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/macropus_eugenii/pep/Macropus_eugenii.Meug_1.0.69.pep.all.fa.gz
FASTA
Meleagris_gallopavo.UMD2.69.cdna.all.fa
Ensembl
Meleagris gallopavo
9103
UMD3.1
FASTA cDNA sequence for Meleagris gallopavo, UMD2 from release-69
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/meleagris_gallopavo/cdna/Meleagris_gallopavo.UMD2.69.cdna.all.fa.rz, ensembl/release-69/fasta/meleagris_gallopavo/cdna/Meleagris_gallopavo.UMD2.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/meleagris_gallopavo/cdna/Meleagris_gallopavo.UMD2.69.cdna.all.fa.gz
FASTA
Meleagris_gallopavo.UMD2.69.dna.toplevel.fa
Ensembl
Meleagris gallopavo
9103
UMD3.1
FASTA DNA sequence for Meleagris gallopavo, UMD2 from release-69
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/meleagris_gallopavo/dna/Meleagris_gallopavo.UMD2.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/meleagris_gallopavo/dna/Meleagris_gallopavo.UMD2.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/meleagris_gallopavo/dna/Meleagris_gallopavo.UMD2.69.dna.toplevel.fa.gz
FASTA
Meleagris_gallopavo.UMD2.69.dna_rm.toplevel.fa
Ensembl
Meleagris gallopavo
9103
UMD3.1
FASTA DNA sequence for Meleagris gallopavo, UMD2 from release-69
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/meleagris_gallopavo/dna/Meleagris_gallopavo.UMD2.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/meleagris_gallopavo/dna/Meleagris_gallopavo.UMD2.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/meleagris_gallopavo/dna/Meleagris_gallopavo.UMD2.69.dna_rm.toplevel.fa.gz
FASTA
Meleagris_gallopavo.UMD2.69.dna_sm.toplevel.fa
Ensembl
Meleagris gallopavo
9103
UMD3.1
FASTA DNA sequence for Meleagris gallopavo, UMD2 from release-69
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/meleagris_gallopavo/dna/Meleagris_gallopavo.UMD2.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/meleagris_gallopavo/dna/Meleagris_gallopavo.UMD2.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/meleagris_gallopavo/dna/Meleagris_gallopavo.UMD2.69.dna_sm.toplevel.fa.gz
FASTA
Meleagris_gallopavo.UMD2.69.ncrna.fa
Ensembl
Meleagris gallopavo
9103
UMD3.1
FASTA ncRNA sequence for Meleagris gallopavo, UMD2 from release-69
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/meleagris_gallopavo/ncrna/Meleagris_gallopavo.UMD2.69.ncrna.fa.rz, ensembl/release-69/fasta/meleagris_gallopavo/ncrna/Meleagris_gallopavo.UMD2.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/meleagris_gallopavo/ncrna/Meleagris_gallopavo.UMD2.69.ncrna.fa.gz
FASTA
Meleagris_gallopavo.UMD2.69.pep.all.fa
Ensembl
Meleagris gallopavo
9103
UMD3.1
FASTA pep sequence for Meleagris gallopavo, UMD2 from release-69
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/meleagris_gallopavo/pep/Meleagris_gallopavo.UMD2.69.pep.all.fa.rz, ensembl/release-69/fasta/meleagris_gallopavo/pep/Meleagris_gallopavo.UMD2.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/meleagris_gallopavo/pep/Meleagris_gallopavo.UMD2.69.pep.all.fa.gz
FASTA
Microcebus_murinus.micMur1.69.cdna.all.fa
Ensembl
Microcebus murinus
30608
micMur1
FASTA cDNA sequence for Microcebus murinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/microcebus_murinus/cdna/Microcebus_murinus.micMur1.69.cdna.all.fa.rz, ensembl/release-69/fasta/microcebus_murinus/cdna/Microcebus_murinus.micMur1.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/microcebus_murinus/cdna/Microcebus_murinus.micMur1.69.cdna.all.fa.gz
FASTA
Microcebus_murinus.micMur1.69.dna.toplevel.fa
Ensembl
Microcebus murinus
30608
micMur1
FASTA DNA sequence for Microcebus murinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/microcebus_murinus/dna/Microcebus_murinus.micMur1.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/microcebus_murinus/dna/Microcebus_murinus.micMur1.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/microcebus_murinus/dna/Microcebus_murinus.micMur1.69.dna.toplevel.fa.gz
FASTA
Microcebus_murinus.micMur1.69.dna_rm.toplevel.fa
Ensembl
Microcebus murinus
30608
micMur1
FASTA DNA sequence for Microcebus murinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/microcebus_murinus/dna/Microcebus_murinus.micMur1.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/microcebus_murinus/dna/Microcebus_murinus.micMur1.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/microcebus_murinus/dna/Microcebus_murinus.micMur1.69.dna_rm.toplevel.fa.gz
FASTA
Microcebus_murinus.micMur1.69.dna_sm.toplevel.fa
Ensembl
Microcebus murinus
30608
micMur1
FASTA DNA sequence for Microcebus murinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/microcebus_murinus/dna/Microcebus_murinus.micMur1.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/microcebus_murinus/dna/Microcebus_murinus.micMur1.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/microcebus_murinus/dna/Microcebus_murinus.micMur1.69.dna_sm.toplevel.fa.gz
FASTA
Microcebus_murinus.micMur1.69.ncrna.fa
Ensembl
Microcebus murinus
30608
micMur1
FASTA ncRNA sequence for Microcebus murinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/microcebus_murinus/ncrna/Microcebus_murinus.micMur1.69.ncrna.fa.rz, ensembl/release-69/fasta/microcebus_murinus/ncrna/Microcebus_murinus.micMur1.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/microcebus_murinus/ncrna/Microcebus_murinus.micMur1.69.ncrna.fa.gz
FASTA
Microcebus_murinus.micMur1.69.pep.all.fa
Ensembl
Microcebus murinus
30608
micMur1
FASTA pep sequence for Microcebus murinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/microcebus_murinus/pep/Microcebus_murinus.micMur1.69.pep.all.fa.rz, ensembl/release-69/fasta/microcebus_murinus/pep/Microcebus_murinus.micMur1.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/microcebus_murinus/pep/Microcebus_murinus.micMur1.69.pep.all.fa.gz
FASTA
Monodelphis_domestica.BROADO5.69.cdna.all.fa
Ensembl
Monodelphis domestica
13616
BROADO5
FASTA cDNA sequence for Monodelphis domestica
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/monodelphis_domestica/cdna/Monodelphis_domestica.BROADO5.69.cdna.all.fa.rz, ensembl/release-69/fasta/monodelphis_domestica/cdna/Monodelphis_domestica.BROADO5.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/monodelphis_domestica/cdna/Monodelphis_domestica.BROADO5.69.cdna.all.fa.gz
FASTA
Monodelphis_domestica.BROADO5.69.dna.toplevel.fa
Ensembl
Monodelphis domestica
13616
BROADO5
FASTA DNA sequence for Monodelphis domestica
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/monodelphis_domestica/dna/Monodelphis_domestica.BROADO5.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/monodelphis_domestica/dna/Monodelphis_domestica.BROADO5.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/monodelphis_domestica/dna/Monodelphis_domestica.BROADO5.69.dna.toplevel.fa.gz
FASTA
Monodelphis_domestica.BROADO5.69.dna_rm.toplevel.fa
Ensembl
Monodelphis domestica
13616
BROADO5
FASTA DNA sequence for Monodelphis domestica
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/monodelphis_domestica/dna/Monodelphis_domestica.BROADO5.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/monodelphis_domestica/dna/Monodelphis_domestica.BROADO5.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/monodelphis_domestica/dna/Monodelphis_domestica.BROADO5.69.dna_rm.toplevel.fa.gz
FASTA
Monodelphis_domestica.BROADO5.69.dna_sm.toplevel.fa
Ensembl
Monodelphis domestica
13616
BROADO5
FASTA DNA sequence for Monodelphis domestica
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/monodelphis_domestica/dna/Monodelphis_domestica.BROADO5.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/monodelphis_domestica/dna/Monodelphis_domestica.BROADO5.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/monodelphis_domestica/dna/Monodelphis_domestica.BROADO5.69.dna_sm.toplevel.fa.gz
FASTA
Monodelphis_domestica.BROADO5.69.ncrna.fa
Ensembl
Monodelphis domestica
13616
BROADO5
FASTA ncRNA sequence for Monodelphis domestica
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/monodelphis_domestica/ncrna/Monodelphis_domestica.BROADO5.69.ncrna.fa.rz, ensembl/release-69/fasta/monodelphis_domestica/ncrna/Monodelphis_domestica.BROADO5.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/monodelphis_domestica/ncrna/Monodelphis_domestica.BROADO5.69.ncrna.fa.gz
FASTA
Monodelphis_domestica.BROADO5.69.pep.all.fa
Ensembl
Monodelphis domestica
13616
BROADO5
FASTA pep sequence for Monodelphis domestica
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/monodelphis_domestica/pep/Monodelphis_domestica.BROADO5.69.pep.all.fa.rz, ensembl/release-69/fasta/monodelphis_domestica/pep/Monodelphis_domestica.BROADO5.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/monodelphis_domestica/pep/Monodelphis_domestica.BROADO5.69.pep.all.fa.gz
FASTA
Mus_musculus.GRCm38.69.cdna.all.fa
Ensembl
Mus musculus
10090
GRCm38
FASTA cDNA sequence for Mus musculus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/mus_musculus/cdna/Mus_musculus.GRCm38.69.cdna.all.fa.rz, ensembl/release-69/fasta/mus_musculus/cdna/Mus_musculus.GRCm38.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/mus_musculus/cdna/Mus_musculus.GRCm38.69.cdna.all.fa.gz
FASTA
Mus_musculus.GRCm38.69.dna.toplevel.fa
Ensembl
Mus musculus
10090
GRCm38
FASTA DNA sequence for Mus musculus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/mus_musculus/dna/Mus_musculus.GRCm38.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/mus_musculus/dna/Mus_musculus.GRCm38.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/mus_musculus/dna/Mus_musculus.GRCm38.69.dna.toplevel.fa.gz
FASTA
Mus_musculus.GRCm38.69.dna_rm.toplevel.fa
Ensembl
Mus musculus
10090
GRCm38
FASTA DNA sequence for Mus musculus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/mus_musculus/dna/Mus_musculus.GRCm38.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/mus_musculus/dna/Mus_musculus.GRCm38.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/mus_musculus/dna/Mus_musculus.GRCm38.69.dna_rm.toplevel.fa.gz
FASTA
Mus_musculus.GRCm38.69.dna_sm.toplevel.fa
Ensembl
Mus musculus
10090
GRCm38
FASTA DNA sequence for Mus musculus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/mus_musculus/dna/Mus_musculus.GRCm38.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/mus_musculus/dna/Mus_musculus.GRCm38.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/mus_musculus/dna/Mus_musculus.GRCm38.69.dna_sm.toplevel.fa.gz
FASTA
Mus_musculus.GRCm38.69.ncrna.fa
Ensembl
Mus musculus
10090
GRCm38
FASTA ncRNA sequence for Mus musculus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/mus_musculus/ncrna/Mus_musculus.GRCm38.69.ncrna.fa.rz, ensembl/release-69/fasta/mus_musculus/ncrna/Mus_musculus.GRCm38.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/mus_musculus/ncrna/Mus_musculus.GRCm38.69.ncrna.fa.gz
FASTA
Mus_musculus.GRCm38.69.pep.all.fa
Ensembl
Mus musculus
10090
GRCm38
FASTA pep sequence for Mus musculus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/mus_musculus/pep/Mus_musculus.GRCm38.69.pep.all.fa.rz, ensembl/release-69/fasta/mus_musculus/pep/Mus_musculus.GRCm38.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/mus_musculus/pep/Mus_musculus.GRCm38.69.pep.all.fa.gz
FASTA
Mustela_putorius_furo.MusPutFur1.0.69.cdna.all.fa
Ensembl
Mustela putorius furo
9669
MusPutFur1.0
FASTA cDNA sequence for Mustela putorius furo
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/mustela_putorius_furo/cdna/Mustela_putorius_furo.MusPutFur1.0.69.cdna.all.fa.rz, ensembl/release-69/fasta/mustela_putorius_furo/cdna/Mustela_putorius_furo.MusPutFur1.0.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/mustela_putorius_furo/cdna/Mustela_putorius_furo.MusPutFur1.0.69.cdna.all.fa.gz
FASTA
Mustela_putorius_furo.MusPutFur1.0.69.dna.toplevel.fa
Ensembl
Mustela putorius furo
9669
MusPutFur1.0
FASTA DNA sequence for Mustela putorius furo
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/mustela_putorius_furo/dna/Mustela_putorius_furo.MusPutFur1.0.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/mustela_putorius_furo/dna/Mustela_putorius_furo.MusPutFur1.0.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/mustela_putorius_furo/dna/Mustela_putorius_furo.MusPutFur1.0.69.dna.toplevel.fa.gz
FASTA
Mustela_putorius_furo.MusPutFur1.0.69.dna_rm.toplevel.fa
Ensembl
Mustela putorius furo
9669
MusPutFur1.0
FASTA DNA sequence for Mustela putorius furo
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/mustela_putorius_furo/dna/Mustela_putorius_furo.MusPutFur1.0.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/mustela_putorius_furo/dna/Mustela_putorius_furo.MusPutFur1.0.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/mustela_putorius_furo/dna/Mustela_putorius_furo.MusPutFur1.0.69.dna_rm.toplevel.fa.gz
FASTA
Mustela_putorius_furo.MusPutFur1.0.69.dna_sm.toplevel.fa
Ensembl
Mustela putorius furo
9669
MusPutFur1.0
FASTA DNA sequence for Mustela putorius furo
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/mustela_putorius_furo/dna/Mustela_putorius_furo.MusPutFur1.0.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/mustela_putorius_furo/dna/Mustela_putorius_furo.MusPutFur1.0.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/mustela_putorius_furo/dna/Mustela_putorius_furo.MusPutFur1.0.69.dna_sm.toplevel.fa.gz
FASTA
Mustela_putorius_furo.MusPutFur1.0.69.ncrna.fa
Ensembl
Mustela putorius furo
9669
MusPutFur1.0
FASTA ncRNA sequence for Mustela putorius furo
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/mustela_putorius_furo/ncrna/Mustela_putorius_furo.MusPutFur1.0.69.ncrna.fa.rz, ensembl/release-69/fasta/mustela_putorius_furo/ncrna/Mustela_putorius_furo.MusPutFur1.0.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/mustela_putorius_furo/ncrna/Mustela_putorius_furo.MusPutFur1.0.69.ncrna.fa.gz
FASTA
Mustela_putorius_furo.MusPutFur1.0.69.pep.all.fa
Ensembl
Mustela putorius furo
9669
MusPutFur1.0
FASTA pep sequence for Mustela putorius furo
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/mustela_putorius_furo/pep/Mustela_putorius_furo.MusPutFur1.0.69.pep.all.fa.rz, ensembl/release-69/fasta/mustela_putorius_furo/pep/Mustela_putorius_furo.MusPutFur1.0.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/mustela_putorius_furo/pep/Mustela_putorius_furo.MusPutFur1.0.69.pep.all.fa.gz
FASTA
Myotis_lucifugus.Myoluc2.0.69.cdna.all.fa
Ensembl
Myotis lucifugus
59463
Myoluc2.0
FASTA cDNA sequence for Myotis lucifugus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/myotis_lucifugus/cdna/Myotis_lucifugus.Myoluc2.0.69.cdna.all.fa.rz, ensembl/release-69/fasta/myotis_lucifugus/cdna/Myotis_lucifugus.Myoluc2.0.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/myotis_lucifugus/cdna/Myotis_lucifugus.Myoluc2.0.69.cdna.all.fa.gz
FASTA
Myotis_lucifugus.Myoluc2.0.69.dna.toplevel.fa
Ensembl
Myotis lucifugus
59463
Myoluc2.0
FASTA DNA sequence for Myotis lucifugus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/myotis_lucifugus/dna/Myotis_lucifugus.Myoluc2.0.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/myotis_lucifugus/dna/Myotis_lucifugus.Myoluc2.0.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/myotis_lucifugus/dna/Myotis_lucifugus.Myoluc2.0.69.dna.toplevel.fa.gz
FASTA
Myotis_lucifugus.Myoluc2.0.69.dna_rm.toplevel.fa
Ensembl
Myotis lucifugus
59463
Myoluc2.0
FASTA DNA sequence for Myotis lucifugus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/myotis_lucifugus/dna/Myotis_lucifugus.Myoluc2.0.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/myotis_lucifugus/dna/Myotis_lucifugus.Myoluc2.0.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/myotis_lucifugus/dna/Myotis_lucifugus.Myoluc2.0.69.dna_rm.toplevel.fa.gz
FASTA
Myotis_lucifugus.Myoluc2.0.69.dna_sm.toplevel.fa
Ensembl
Myotis lucifugus
59463
Myoluc2.0
FASTA DNA sequence for Myotis lucifugus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/myotis_lucifugus/dna/Myotis_lucifugus.Myoluc2.0.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/myotis_lucifugus/dna/Myotis_lucifugus.Myoluc2.0.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/myotis_lucifugus/dna/Myotis_lucifugus.Myoluc2.0.69.dna_sm.toplevel.fa.gz
FASTA
Myotis_lucifugus.Myoluc2.0.69.ncrna.fa
Ensembl
Myotis lucifugus
59463
Myoluc2.0
FASTA ncRNA sequence for Myotis lucifugus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/myotis_lucifugus/ncrna/Myotis_lucifugus.Myoluc2.0.69.ncrna.fa.rz, ensembl/release-69/fasta/myotis_lucifugus/ncrna/Myotis_lucifugus.Myoluc2.0.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/myotis_lucifugus/ncrna/Myotis_lucifugus.Myoluc2.0.69.ncrna.fa.gz
FASTA
Myotis_lucifugus.Myoluc2.0.69.pep.all.fa
Ensembl
Myotis lucifugus
59463
Myoluc2.0
FASTA pep sequence for Myotis lucifugus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/myotis_lucifugus/pep/Myotis_lucifugus.Myoluc2.0.69.pep.all.fa.rz, ensembl/release-69/fasta/myotis_lucifugus/pep/Myotis_lucifugus.Myoluc2.0.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/myotis_lucifugus/pep/Myotis_lucifugus.Myoluc2.0.69.pep.all.fa.gz
FASTA
Nomascus_leucogenys.Nleu1.0.69.cdna.all.fa
Ensembl
Nomascus leucogenys
61853
Nleu1.0
FASTA cDNA sequence for Nomascus leucogenys
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/nomascus_leucogenys/cdna/Nomascus_leucogenys.Nleu1.0.69.cdna.all.fa.rz, ensembl/release-69/fasta/nomascus_leucogenys/cdna/Nomascus_leucogenys.Nleu1.0.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/nomascus_leucogenys/cdna/Nomascus_leucogenys.Nleu1.0.69.cdna.all.fa.gz
FASTA
Nomascus_leucogenys.Nleu1.0.69.dna.toplevel.fa
Ensembl
Nomascus leucogenys
61853
Nleu1.0
FASTA DNA sequence for Nomascus leucogenys
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/nomascus_leucogenys/dna/Nomascus_leucogenys.Nleu1.0.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/nomascus_leucogenys/dna/Nomascus_leucogenys.Nleu1.0.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/nomascus_leucogenys/dna/Nomascus_leucogenys.Nleu1.0.69.dna.toplevel.fa.gz
FASTA
Nomascus_leucogenys.Nleu1.0.69.dna_rm.toplevel.fa
Ensembl
Nomascus leucogenys
61853
Nleu1.0
FASTA DNA sequence for Nomascus leucogenys
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/nomascus_leucogenys/dna/Nomascus_leucogenys.Nleu1.0.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/nomascus_leucogenys/dna/Nomascus_leucogenys.Nleu1.0.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/nomascus_leucogenys/dna/Nomascus_leucogenys.Nleu1.0.69.dna_rm.toplevel.fa.gz
FASTA
Nomascus_leucogenys.Nleu1.0.69.dna_sm.toplevel.fa
Ensembl
Nomascus leucogenys
61853
Nleu1.0
FASTA DNA sequence for Nomascus leucogenys
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/nomascus_leucogenys/dna/Nomascus_leucogenys.Nleu1.0.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/nomascus_leucogenys/dna/Nomascus_leucogenys.Nleu1.0.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/nomascus_leucogenys/dna/Nomascus_leucogenys.Nleu1.0.69.dna_sm.toplevel.fa.gz
FASTA
Nomascus_leucogenys.Nleu1.0.69.ncrna.fa
Ensembl
Nomascus leucogenys
61853
Nleu1.0
FASTA ncRNA sequence for Nomascus leucogenys
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/nomascus_leucogenys/ncrna/Nomascus_leucogenys.Nleu1.0.69.ncrna.fa.rz, ensembl/release-69/fasta/nomascus_leucogenys/ncrna/Nomascus_leucogenys.Nleu1.0.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/nomascus_leucogenys/ncrna/Nomascus_leucogenys.Nleu1.0.69.ncrna.fa.gz
FASTA
Nomascus_leucogenys.Nleu1.0.69.pep.all.fa
Ensembl
Nomascus leucogenys
61853
Nleu1.0
FASTA pep sequence for Nomascus leucogenys
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/nomascus_leucogenys/pep/Nomascus_leucogenys.Nleu1.0.69.pep.all.fa.rz, ensembl/release-69/fasta/nomascus_leucogenys/pep/Nomascus_leucogenys.Nleu1.0.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/nomascus_leucogenys/pep/Nomascus_leucogenys.Nleu1.0.69.pep.all.fa.gz
FASTA
Ochotona_princeps.pika.69.cdna.all.fa
Ensembl
Ochotona princeps
9978
pika
FASTA cDNA sequence for Ochotona princeps
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ochotona_princeps/cdna/Ochotona_princeps.pika.69.cdna.all.fa.rz, ensembl/release-69/fasta/ochotona_princeps/cdna/Ochotona_princeps.pika.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ochotona_princeps/cdna/Ochotona_princeps.pika.69.cdna.all.fa.gz
FASTA
Ochotona_princeps.pika.69.dna.toplevel.fa
Ensembl
Ochotona princeps
9978
pika
FASTA DNA sequence for Ochotona princeps
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ochotona_princeps/dna/Ochotona_princeps.pika.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/ochotona_princeps/dna/Ochotona_princeps.pika.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ochotona_princeps/dna/Ochotona_princeps.pika.69.dna.toplevel.fa.gz
FASTA
Ochotona_princeps.pika.69.dna_rm.toplevel.fa
Ensembl
Ochotona princeps
9978
pika
FASTA DNA sequence for Ochotona princeps
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ochotona_princeps/dna/Ochotona_princeps.pika.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/ochotona_princeps/dna/Ochotona_princeps.pika.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ochotona_princeps/dna/Ochotona_princeps.pika.69.dna_rm.toplevel.fa.gz
FASTA
Ochotona_princeps.pika.69.dna_sm.toplevel.fa
Ensembl
Ochotona princeps
9978
pika
FASTA DNA sequence for Ochotona princeps
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ochotona_princeps/dna/Ochotona_princeps.pika.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/ochotona_princeps/dna/Ochotona_princeps.pika.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ochotona_princeps/dna/Ochotona_princeps.pika.69.dna_sm.toplevel.fa.gz
FASTA
Ochotona_princeps.pika.69.ncrna.fa
Ensembl
Ochotona princeps
9978
pika
FASTA ncRNA sequence for Ochotona princeps
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ochotona_princeps/ncrna/Ochotona_princeps.pika.69.ncrna.fa.rz, ensembl/release-69/fasta/ochotona_princeps/ncrna/Ochotona_princeps.pika.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ochotona_princeps/ncrna/Ochotona_princeps.pika.69.ncrna.fa.gz
FASTA
Ochotona_princeps.pika.69.pep.all.fa
Ensembl
Ochotona princeps
9978
pika
FASTA pep sequence for Ochotona princeps
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ochotona_princeps/pep/Ochotona_princeps.pika.69.pep.all.fa.rz, ensembl/release-69/fasta/ochotona_princeps/pep/Ochotona_princeps.pika.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ochotona_princeps/pep/Ochotona_princeps.pika.69.pep.all.fa.gz
FASTA
Oreochromis_niloticus.Orenil1.0.69.cdna.all.fa
Ensembl
Oreochromis niloticus
8128
Orenil1.0
FASTA cDNA sequence for Oreochromis niloticus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/oreochromis_niloticus/cdna/Oreochromis_niloticus.Orenil1.0.69.cdna.all.fa.rz, ensembl/release-69/fasta/oreochromis_niloticus/cdna/Oreochromis_niloticus.Orenil1.0.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/oreochromis_niloticus/cdna/Oreochromis_niloticus.Orenil1.0.69.cdna.all.fa.gz
FASTA
Oreochromis_niloticus.Orenil1.0.69.dna.toplevel.fa
Ensembl
Oreochromis niloticus
8128
Orenil1.0
FASTA DNA sequence for Oreochromis niloticus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/oreochromis_niloticus/dna/Oreochromis_niloticus.Orenil1.0.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/oreochromis_niloticus/dna/Oreochromis_niloticus.Orenil1.0.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/oreochromis_niloticus/dna/Oreochromis_niloticus.Orenil1.0.69.dna.toplevel.fa.gz
FASTA
Oreochromis_niloticus.Orenil1.0.69.dna_rm.toplevel.fa
Ensembl
Oreochromis niloticus
8128
Orenil1.0
FASTA DNA sequence for Oreochromis niloticus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/oreochromis_niloticus/dna/Oreochromis_niloticus.Orenil1.0.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/oreochromis_niloticus/dna/Oreochromis_niloticus.Orenil1.0.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/oreochromis_niloticus/dna/Oreochromis_niloticus.Orenil1.0.69.dna_rm.toplevel.fa.gz
FASTA
Oreochromis_niloticus.Orenil1.0.69.dna_sm.toplevel.fa
Ensembl
Oreochromis niloticus
8128
Orenil1.0
FASTA DNA sequence for Oreochromis niloticus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/oreochromis_niloticus/dna/Oreochromis_niloticus.Orenil1.0.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/oreochromis_niloticus/dna/Oreochromis_niloticus.Orenil1.0.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/oreochromis_niloticus/dna/Oreochromis_niloticus.Orenil1.0.69.dna_sm.toplevel.fa.gz
FASTA
Oreochromis_niloticus.Orenil1.0.69.ncrna.fa
Ensembl
Oreochromis niloticus
8128
Orenil1.0
FASTA ncRNA sequence for Oreochromis niloticus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/oreochromis_niloticus/ncrna/Oreochromis_niloticus.Orenil1.0.69.ncrna.fa.rz, ensembl/release-69/fasta/oreochromis_niloticus/ncrna/Oreochromis_niloticus.Orenil1.0.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/oreochromis_niloticus/ncrna/Oreochromis_niloticus.Orenil1.0.69.ncrna.fa.gz
FASTA
Oreochromis_niloticus.Orenil1.0.69.pep.all.fa
Ensembl
Oreochromis niloticus
8128
Orenil1.0
FASTA pep sequence for Oreochromis niloticus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/oreochromis_niloticus/pep/Oreochromis_niloticus.Orenil1.0.69.pep.all.fa.rz, ensembl/release-69/fasta/oreochromis_niloticus/pep/Oreochromis_niloticus.Orenil1.0.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/oreochromis_niloticus/pep/Oreochromis_niloticus.Orenil1.0.69.pep.all.fa.gz
FASTA
Ornithorhynchus_anatinus.OANA5.69.cdna.all.fa
Ensembl
Ornithorhynchus anatinus
9258
OANA5
FASTA cDNA sequence for Ornithorhynchus anatinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ornithorhynchus_anatinus/cdna/Ornithorhynchus_anatinus.OANA5.69.cdna.all.fa.rz, ensembl/release-69/fasta/ornithorhynchus_anatinus/cdna/Ornithorhynchus_anatinus.OANA5.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ornithorhynchus_anatinus/cdna/Ornithorhynchus_anatinus.OANA5.69.cdna.all.fa.gz
FASTA
Ornithorhynchus_anatinus.OANA5.69.dna.toplevel.fa
Ensembl
Ornithorhynchus anatinus
9258
OANA5
FASTA DNA sequence for Ornithorhynchus anatinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ornithorhynchus_anatinus/dna/Ornithorhynchus_anatinus.OANA5.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/ornithorhynchus_anatinus/dna/Ornithorhynchus_anatinus.OANA5.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ornithorhynchus_anatinus/dna/Ornithorhynchus_anatinus.OANA5.69.dna.toplevel.fa.gz
FASTA
Ornithorhynchus_anatinus.OANA5.69.dna_rm.toplevel.fa
Ensembl
Ornithorhynchus anatinus
9258
OANA5
FASTA DNA sequence for Ornithorhynchus anatinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ornithorhynchus_anatinus/dna/Ornithorhynchus_anatinus.OANA5.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/ornithorhynchus_anatinus/dna/Ornithorhynchus_anatinus.OANA5.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ornithorhynchus_anatinus/dna/Ornithorhynchus_anatinus.OANA5.69.dna_rm.toplevel.fa.gz
FASTA
Ornithorhynchus_anatinus.OANA5.69.dna_sm.toplevel.fa
Ensembl
Ornithorhynchus anatinus
9258
OANA5
FASTA DNA sequence for Ornithorhynchus anatinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ornithorhynchus_anatinus/dna/Ornithorhynchus_anatinus.OANA5.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/ornithorhynchus_anatinus/dna/Ornithorhynchus_anatinus.OANA5.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ornithorhynchus_anatinus/dna/Ornithorhynchus_anatinus.OANA5.69.dna_sm.toplevel.fa.gz
FASTA
Ornithorhynchus_anatinus.OANA5.69.ncrna.fa
Ensembl
Ornithorhynchus anatinus
9258
OANA5
FASTA ncRNA sequence for Ornithorhynchus anatinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ornithorhynchus_anatinus/ncrna/Ornithorhynchus_anatinus.OANA5.69.ncrna.fa.rz, ensembl/release-69/fasta/ornithorhynchus_anatinus/ncrna/Ornithorhynchus_anatinus.OANA5.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ornithorhynchus_anatinus/ncrna/Ornithorhynchus_anatinus.OANA5.69.ncrna.fa.gz
FASTA
Ornithorhynchus_anatinus.OANA5.69.pep.all.fa
Ensembl
Ornithorhynchus anatinus
9258
OANA5
FASTA pep sequence for Ornithorhynchus anatinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/ornithorhynchus_anatinus/pep/Ornithorhynchus_anatinus.OANA5.69.pep.all.fa.rz, ensembl/release-69/fasta/ornithorhynchus_anatinus/pep/Ornithorhynchus_anatinus.OANA5.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/ornithorhynchus_anatinus/pep/Ornithorhynchus_anatinus.OANA5.69.pep.all.fa.gz
FASTA
Oryctolagus_cuniculus.oryCun2.69.cdna.all.fa
Ensembl
Oryctolagus cuniculus
9986
oryCun2
FASTA cDNA sequence for Oryctolagus cuniculus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/oryctolagus_cuniculus/cdna/Oryctolagus_cuniculus.oryCun2.69.cdna.all.fa.rz, ensembl/release-69/fasta/oryctolagus_cuniculus/cdna/Oryctolagus_cuniculus.oryCun2.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/oryctolagus_cuniculus/cdna/Oryctolagus_cuniculus.oryCun2.69.cdna.all.fa.gz
FASTA
Oryctolagus_cuniculus.oryCun2.69.dna.toplevel.fa
Ensembl
Oryctolagus cuniculus
9986
oryCun2
FASTA DNA sequence for Oryctolagus cuniculus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/oryctolagus_cuniculus/dna/Oryctolagus_cuniculus.oryCun2.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/oryctolagus_cuniculus/dna/Oryctolagus_cuniculus.oryCun2.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/oryctolagus_cuniculus/dna/Oryctolagus_cuniculus.oryCun2.69.dna.toplevel.fa.gz
FASTA
Oryctolagus_cuniculus.oryCun2.69.dna_rm.toplevel.fa
Ensembl
Oryctolagus cuniculus
9986
oryCun2
FASTA DNA sequence for Oryctolagus cuniculus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/oryctolagus_cuniculus/dna/Oryctolagus_cuniculus.oryCun2.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/oryctolagus_cuniculus/dna/Oryctolagus_cuniculus.oryCun2.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/oryctolagus_cuniculus/dna/Oryctolagus_cuniculus.oryCun2.69.dna_rm.toplevel.fa.gz
FASTA
Oryctolagus_cuniculus.oryCun2.69.dna_sm.toplevel.fa
Ensembl
Oryctolagus cuniculus
9986
oryCun2
FASTA DNA sequence for Oryctolagus cuniculus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/oryctolagus_cuniculus/dna/Oryctolagus_cuniculus.oryCun2.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/oryctolagus_cuniculus/dna/Oryctolagus_cuniculus.oryCun2.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/oryctolagus_cuniculus/dna/Oryctolagus_cuniculus.oryCun2.69.dna_sm.toplevel.fa.gz
FASTA
Oryctolagus_cuniculus.oryCun2.69.ncrna.fa
Ensembl
Oryctolagus cuniculus
9986
oryCun2
FASTA ncRNA sequence for Oryctolagus cuniculus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/oryctolagus_cuniculus/ncrna/Oryctolagus_cuniculus.oryCun2.69.ncrna.fa.rz, ensembl/release-69/fasta/oryctolagus_cuniculus/ncrna/Oryctolagus_cuniculus.oryCun2.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/oryctolagus_cuniculus/ncrna/Oryctolagus_cuniculus.oryCun2.69.ncrna.fa.gz
FASTA
Oryctolagus_cuniculus.oryCun2.69.pep.all.fa
Ensembl
Oryctolagus cuniculus
9986
oryCun2
FASTA pep sequence for Oryctolagus cuniculus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/oryctolagus_cuniculus/pep/Oryctolagus_cuniculus.oryCun2.69.pep.all.fa.rz, ensembl/release-69/fasta/oryctolagus_cuniculus/pep/Oryctolagus_cuniculus.oryCun2.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/oryctolagus_cuniculus/pep/Oryctolagus_cuniculus.oryCun2.69.pep.all.fa.gz
FASTA
Oryzias_latipes.MEDAKA1.69.cdna.all.fa
Ensembl
Oryzias latipes
8090
MEDAKA1
FASTA cDNA sequence for Oryzias latipes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/oryzias_latipes/cdna/Oryzias_latipes.MEDAKA1.69.cdna.all.fa.rz, ensembl/release-69/fasta/oryzias_latipes/cdna/Oryzias_latipes.MEDAKA1.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/oryzias_latipes/cdna/Oryzias_latipes.MEDAKA1.69.cdna.all.fa.gz
FASTA
Oryzias_latipes.MEDAKA1.69.dna.toplevel.fa
Ensembl
Oryzias latipes
8090
MEDAKA1
FASTA DNA sequence for Oryzias latipes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/oryzias_latipes/dna/Oryzias_latipes.MEDAKA1.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/oryzias_latipes/dna/Oryzias_latipes.MEDAKA1.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/oryzias_latipes/dna/Oryzias_latipes.MEDAKA1.69.dna.toplevel.fa.gz
FASTA
Oryzias_latipes.MEDAKA1.69.dna_rm.toplevel.fa
Ensembl
Oryzias latipes
8090
MEDAKA1
FASTA DNA sequence for Oryzias latipes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/oryzias_latipes/dna/Oryzias_latipes.MEDAKA1.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/oryzias_latipes/dna/Oryzias_latipes.MEDAKA1.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/oryzias_latipes/dna/Oryzias_latipes.MEDAKA1.69.dna_rm.toplevel.fa.gz
FASTA
Oryzias_latipes.MEDAKA1.69.dna_sm.toplevel.fa
Ensembl
Oryzias latipes
8090
MEDAKA1
FASTA DNA sequence for Oryzias latipes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/oryzias_latipes/dna/Oryzias_latipes.MEDAKA1.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/oryzias_latipes/dna/Oryzias_latipes.MEDAKA1.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/oryzias_latipes/dna/Oryzias_latipes.MEDAKA1.69.dna_sm.toplevel.fa.gz
FASTA
Oryzias_latipes.MEDAKA1.69.ncrna.fa
Ensembl
Oryzias latipes
8090
MEDAKA1
FASTA ncRNA sequence for Oryzias latipes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/oryzias_latipes/ncrna/Oryzias_latipes.MEDAKA1.69.ncrna.fa.rz, ensembl/release-69/fasta/oryzias_latipes/ncrna/Oryzias_latipes.MEDAKA1.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/oryzias_latipes/ncrna/Oryzias_latipes.MEDAKA1.69.ncrna.fa.gz
FASTA
Oryzias_latipes.MEDAKA1.69.pep.all.fa
Ensembl
Oryzias latipes
8090
MEDAKA1
FASTA pep sequence for Oryzias latipes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/oryzias_latipes/pep/Oryzias_latipes.MEDAKA1.69.pep.all.fa.rz, ensembl/release-69/fasta/oryzias_latipes/pep/Oryzias_latipes.MEDAKA1.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/oryzias_latipes/pep/Oryzias_latipes.MEDAKA1.69.pep.all.fa.gz
FASTA
Otolemur_garnettii.OtoGar3.69.cdna.all.fa
Ensembl
Otolemur garnettii
30611
OtoGar3
FASTA cDNA sequence for Otolemur garnettii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/otolemur_garnettii/cdna/Otolemur_garnettii.OtoGar3.69.cdna.all.fa.rz, ensembl/release-69/fasta/otolemur_garnettii/cdna/Otolemur_garnettii.OtoGar3.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/otolemur_garnettii/cdna/Otolemur_garnettii.OtoGar3.69.cdna.all.fa.gz
FASTA
Otolemur_garnettii.OtoGar3.69.dna.toplevel.fa
Ensembl
Otolemur garnettii
30611
OtoGar3
FASTA DNA sequence for Otolemur garnettii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/otolemur_garnettii/dna/Otolemur_garnettii.OtoGar3.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/otolemur_garnettii/dna/Otolemur_garnettii.OtoGar3.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/otolemur_garnettii/dna/Otolemur_garnettii.OtoGar3.69.dna.toplevel.fa.gz
FASTA
Otolemur_garnettii.OtoGar3.69.dna_rm.toplevel.fa
Ensembl
Otolemur garnettii
30611
OtoGar3
FASTA DNA sequence for Otolemur garnettii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/otolemur_garnettii/dna/Otolemur_garnettii.OtoGar3.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/otolemur_garnettii/dna/Otolemur_garnettii.OtoGar3.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/otolemur_garnettii/dna/Otolemur_garnettii.OtoGar3.69.dna_rm.toplevel.fa.gz
FASTA
Otolemur_garnettii.OtoGar3.69.dna_sm.toplevel.fa
Ensembl
Otolemur garnettii
30611
OtoGar3
FASTA DNA sequence for Otolemur garnettii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/otolemur_garnettii/dna/Otolemur_garnettii.OtoGar3.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/otolemur_garnettii/dna/Otolemur_garnettii.OtoGar3.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/otolemur_garnettii/dna/Otolemur_garnettii.OtoGar3.69.dna_sm.toplevel.fa.gz
FASTA
Otolemur_garnettii.OtoGar3.69.ncrna.fa
Ensembl
Otolemur garnettii
30611
OtoGar3
FASTA ncRNA sequence for Otolemur garnettii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/otolemur_garnettii/ncrna/Otolemur_garnettii.OtoGar3.69.ncrna.fa.rz, ensembl/release-69/fasta/otolemur_garnettii/ncrna/Otolemur_garnettii.OtoGar3.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/otolemur_garnettii/ncrna/Otolemur_garnettii.OtoGar3.69.ncrna.fa.gz
FASTA
Otolemur_garnettii.OtoGar3.69.pep.all.fa
Ensembl
Otolemur garnettii
30611
OtoGar3
FASTA pep sequence for Otolemur garnettii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/otolemur_garnettii/pep/Otolemur_garnettii.OtoGar3.69.pep.all.fa.rz, ensembl/release-69/fasta/otolemur_garnettii/pep/Otolemur_garnettii.OtoGar3.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/otolemur_garnettii/pep/Otolemur_garnettii.OtoGar3.69.pep.all.fa.gz
FASTA
Pan_troglodytes.CHIMP2.1.4.69.cdna.all.fa
Ensembl
Pan troglodytes
9598
CHIMP2.1.4
FASTA cDNA sequence for Pan troglodytes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/pan_troglodytes/cdna/Pan_troglodytes.CHIMP2.1.4.69.cdna.all.fa.rz, ensembl/release-69/fasta/pan_troglodytes/cdna/Pan_troglodytes.CHIMP2.1.4.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/pan_troglodytes/cdna/Pan_troglodytes.CHIMP2.1.4.69.cdna.all.fa.gz
FASTA
Pan_troglodytes.CHIMP2.1.4.69.dna.toplevel.fa
Ensembl
Pan troglodytes
9598
CHIMP2.1.4
FASTA DNA sequence for Pan troglodytes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/pan_troglodytes/dna/Pan_troglodytes.CHIMP2.1.4.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/pan_troglodytes/dna/Pan_troglodytes.CHIMP2.1.4.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/pan_troglodytes/dna/Pan_troglodytes.CHIMP2.1.4.69.dna.toplevel.fa.gz
FASTA
Pan_troglodytes.CHIMP2.1.4.69.dna_rm.toplevel.fa
Ensembl
Pan troglodytes
9598
CHIMP2.1.4
FASTA DNA sequence for Pan troglodytes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/pan_troglodytes/dna/Pan_troglodytes.CHIMP2.1.4.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/pan_troglodytes/dna/Pan_troglodytes.CHIMP2.1.4.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/pan_troglodytes/dna/Pan_troglodytes.CHIMP2.1.4.69.dna_rm.toplevel.fa.gz
FASTA
Pan_troglodytes.CHIMP2.1.4.69.dna_sm.toplevel.fa
Ensembl
Pan troglodytes
9598
CHIMP2.1.4
FASTA DNA sequence for Pan troglodytes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/pan_troglodytes/dna/Pan_troglodytes.CHIMP2.1.4.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/pan_troglodytes/dna/Pan_troglodytes.CHIMP2.1.4.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/pan_troglodytes/dna/Pan_troglodytes.CHIMP2.1.4.69.dna_sm.toplevel.fa.gz
FASTA
Pan_troglodytes.CHIMP2.1.4.69.ncrna.fa
Ensembl
Pan troglodytes
9598
CHIMP2.1.4
FASTA ncRNA sequence for Pan troglodytes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/pan_troglodytes/ncrna/Pan_troglodytes.CHIMP2.1.4.69.ncrna.fa.rz, ensembl/release-69/fasta/pan_troglodytes/ncrna/Pan_troglodytes.CHIMP2.1.4.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/pan_troglodytes/ncrna/Pan_troglodytes.CHIMP2.1.4.69.ncrna.fa.gz
FASTA
Pan_troglodytes.CHIMP2.1.4.69.pep.all.fa
Ensembl
Pan troglodytes
9598
CHIMP2.1.4
FASTA pep sequence for Pan troglodytes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/pan_troglodytes/pep/Pan_troglodytes.CHIMP2.1.4.69.pep.all.fa.rz, ensembl/release-69/fasta/pan_troglodytes/pep/Pan_troglodytes.CHIMP2.1.4.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/pan_troglodytes/pep/Pan_troglodytes.CHIMP2.1.4.69.pep.all.fa.gz
FASTA
Pelodiscus_sinensis.PelSin_1.0.69.cdna.all.fa
Ensembl
Pelodiscus sinensis
13735
PelSin_1.0
FASTA cDNA sequence for Pelodiscus sinensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/pelodiscus_sinensis/cdna/Pelodiscus_sinensis.PelSin_1.0.69.cdna.all.fa.rz, ensembl/release-69/fasta/pelodiscus_sinensis/cdna/Pelodiscus_sinensis.PelSin_1.0.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/pelodiscus_sinensis/cdna/Pelodiscus_sinensis.PelSin_1.0.69.cdna.all.fa.gz
FASTA
Pelodiscus_sinensis.PelSin_1.0.69.dna.toplevel.fa
Ensembl
Pelodiscus sinensis
13735
PelSin_1.0
FASTA DNA sequence for Pelodiscus sinensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/pelodiscus_sinensis/dna/Pelodiscus_sinensis.PelSin_1.0.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/pelodiscus_sinensis/dna/Pelodiscus_sinensis.PelSin_1.0.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/pelodiscus_sinensis/dna/Pelodiscus_sinensis.PelSin_1.0.69.dna.toplevel.fa.gz
FASTA
Pelodiscus_sinensis.PelSin_1.0.69.dna_rm.toplevel.fa
Ensembl
Pelodiscus sinensis
13735
PelSin_1.0
FASTA DNA sequence for Pelodiscus sinensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/pelodiscus_sinensis/dna/Pelodiscus_sinensis.PelSin_1.0.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/pelodiscus_sinensis/dna/Pelodiscus_sinensis.PelSin_1.0.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/pelodiscus_sinensis/dna/Pelodiscus_sinensis.PelSin_1.0.69.dna_rm.toplevel.fa.gz
FASTA
Pelodiscus_sinensis.PelSin_1.0.69.dna_sm.toplevel.fa
Ensembl
Pelodiscus sinensis
13735
PelSin_1.0
FASTA DNA sequence for Pelodiscus sinensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/pelodiscus_sinensis/dna/Pelodiscus_sinensis.PelSin_1.0.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/pelodiscus_sinensis/dna/Pelodiscus_sinensis.PelSin_1.0.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/pelodiscus_sinensis/dna/Pelodiscus_sinensis.PelSin_1.0.69.dna_sm.toplevel.fa.gz
FASTA
Pelodiscus_sinensis.PelSin_1.0.69.ncrna.fa
Ensembl
Pelodiscus sinensis
13735
PelSin_1.0
FASTA ncRNA sequence for Pelodiscus sinensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/pelodiscus_sinensis/ncrna/Pelodiscus_sinensis.PelSin_1.0.69.ncrna.fa.rz, ensembl/release-69/fasta/pelodiscus_sinensis/ncrna/Pelodiscus_sinensis.PelSin_1.0.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/pelodiscus_sinensis/ncrna/Pelodiscus_sinensis.PelSin_1.0.69.ncrna.fa.gz
FASTA
Pelodiscus_sinensis.PelSin_1.0.69.pep.all.fa
Ensembl
Pelodiscus sinensis
13735
PelSin_1.0
FASTA pep sequence for Pelodiscus sinensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/pelodiscus_sinensis/pep/Pelodiscus_sinensis.PelSin_1.0.69.pep.all.fa.rz, ensembl/release-69/fasta/pelodiscus_sinensis/pep/Pelodiscus_sinensis.PelSin_1.0.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/pelodiscus_sinensis/pep/Pelodiscus_sinensis.PelSin_1.0.69.pep.all.fa.gz
FASTA
Petromyzon_marinus.Pmarinus_7.0.69.cdna.all.fa
Ensembl
Petromyzon marinus
7757
Pmarinus_7.0
FASTA cDNA sequence for Petromyzon marinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/petromyzon_marinus/cdna/Petromyzon_marinus.Pmarinus_7.0.69.cdna.all.fa.rz, ensembl/release-69/fasta/petromyzon_marinus/cdna/Petromyzon_marinus.Pmarinus_7.0.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/petromyzon_marinus/cdna/Petromyzon_marinus.Pmarinus_7.0.69.cdna.all.fa.gz
FASTA
Petromyzon_marinus.Pmarinus_7.0.69.dna.toplevel.fa
Ensembl
Petromyzon marinus
7757
Pmarinus_7.0
FASTA DNA sequence for Petromyzon marinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/petromyzon_marinus/dna/Petromyzon_marinus.Pmarinus_7.0.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/petromyzon_marinus/dna/Petromyzon_marinus.Pmarinus_7.0.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/petromyzon_marinus/dna/Petromyzon_marinus.Pmarinus_7.0.69.dna.toplevel.fa.gz
FASTA
Petromyzon_marinus.Pmarinus_7.0.69.dna_rm.toplevel.fa
Ensembl
Petromyzon marinus
7757
Pmarinus_7.0
FASTA DNA sequence for Petromyzon marinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/petromyzon_marinus/dna/Petromyzon_marinus.Pmarinus_7.0.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/petromyzon_marinus/dna/Petromyzon_marinus.Pmarinus_7.0.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/petromyzon_marinus/dna/Petromyzon_marinus.Pmarinus_7.0.69.dna_rm.toplevel.fa.gz
FASTA
Petromyzon_marinus.Pmarinus_7.0.69.dna_sm.toplevel.fa
Ensembl
Petromyzon marinus
7757
Pmarinus_7.0
FASTA DNA sequence for Petromyzon marinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/petromyzon_marinus/dna/Petromyzon_marinus.Pmarinus_7.0.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/petromyzon_marinus/dna/Petromyzon_marinus.Pmarinus_7.0.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/petromyzon_marinus/dna/Petromyzon_marinus.Pmarinus_7.0.69.dna_sm.toplevel.fa.gz
FASTA
Petromyzon_marinus.Pmarinus_7.0.69.ncrna.fa
Ensembl
Petromyzon marinus
7757
Pmarinus_7.0
FASTA ncRNA sequence for Petromyzon marinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/petromyzon_marinus/ncrna/Petromyzon_marinus.Pmarinus_7.0.69.ncrna.fa.rz, ensembl/release-69/fasta/petromyzon_marinus/ncrna/Petromyzon_marinus.Pmarinus_7.0.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/petromyzon_marinus/ncrna/Petromyzon_marinus.Pmarinus_7.0.69.ncrna.fa.gz
FASTA
Petromyzon_marinus.Pmarinus_7.0.69.pep.all.fa
Ensembl
Petromyzon marinus
7757
Pmarinus_7.0
FASTA pep sequence for Petromyzon marinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/petromyzon_marinus/pep/Petromyzon_marinus.Pmarinus_7.0.69.pep.all.fa.rz, ensembl/release-69/fasta/petromyzon_marinus/pep/Petromyzon_marinus.Pmarinus_7.0.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/petromyzon_marinus/pep/Petromyzon_marinus.Pmarinus_7.0.69.pep.all.fa.gz
FASTA
Pongo_abelii.PPYG2.69.cdna.all.fa
Ensembl
Pongo abelii
9601
PPYG2
FASTA cDNA sequence for Pongo abelii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/pongo_abelii/cdna/Pongo_abelii.PPYG2.69.cdna.all.fa.rz, ensembl/release-69/fasta/pongo_abelii/cdna/Pongo_abelii.PPYG2.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/pongo_abelii/cdna/Pongo_abelii.PPYG2.69.cdna.all.fa.gz
FASTA
Pongo_abelii.PPYG2.69.dna.toplevel.fa
Ensembl
Pongo abelii
9601
PPYG2
FASTA DNA sequence for Pongo abelii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/pongo_abelii/dna/Pongo_abelii.PPYG2.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/pongo_abelii/dna/Pongo_abelii.PPYG2.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/pongo_abelii/dna/Pongo_abelii.PPYG2.69.dna.toplevel.fa.gz
FASTA
Pongo_abelii.PPYG2.69.dna_rm.toplevel.fa
Ensembl
Pongo abelii
9601
PPYG2
FASTA DNA sequence for Pongo abelii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/pongo_abelii/dna/Pongo_abelii.PPYG2.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/pongo_abelii/dna/Pongo_abelii.PPYG2.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/pongo_abelii/dna/Pongo_abelii.PPYG2.69.dna_rm.toplevel.fa.gz
FASTA
Pongo_abelii.PPYG2.69.dna_sm.toplevel.fa
Ensembl
Pongo abelii
9601
PPYG2
FASTA DNA sequence for Pongo abelii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/pongo_abelii/dna/Pongo_abelii.PPYG2.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/pongo_abelii/dna/Pongo_abelii.PPYG2.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/pongo_abelii/dna/Pongo_abelii.PPYG2.69.dna_sm.toplevel.fa.gz
FASTA
Pongo_abelii.PPYG2.69.ncrna.fa
Ensembl
Pongo abelii
9601
PPYG2
FASTA ncRNA sequence for Pongo abelii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/pongo_abelii/ncrna/Pongo_abelii.PPYG2.69.ncrna.fa.rz, ensembl/release-69/fasta/pongo_abelii/ncrna/Pongo_abelii.PPYG2.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/pongo_abelii/ncrna/Pongo_abelii.PPYG2.69.ncrna.fa.gz
FASTA
Pongo_abelii.PPYG2.69.pep.all.fa
Ensembl
Pongo abelii
9601
PPYG2
FASTA pep sequence for Pongo abelii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/pongo_abelii/pep/Pongo_abelii.PPYG2.69.pep.all.fa.rz, ensembl/release-69/fasta/pongo_abelii/pep/Pongo_abelii.PPYG2.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/pongo_abelii/pep/Pongo_abelii.PPYG2.69.pep.all.fa.gz
FASTA
Procavia_capensis.proCap1.69.cdna.all.fa
Ensembl
Procavia capensis
9813
proCap1
FASTA cDNA sequence for Procavia capensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/procavia_capensis/cdna/Procavia_capensis.proCap1.69.cdna.all.fa.rz, ensembl/release-69/fasta/procavia_capensis/cdna/Procavia_capensis.proCap1.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/procavia_capensis/cdna/Procavia_capensis.proCap1.69.cdna.all.fa.gz
FASTA
Procavia_capensis.proCap1.69.dna.toplevel.fa
Ensembl
Procavia capensis
9813
proCap1
FASTA DNA sequence for Procavia capensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/procavia_capensis/dna/Procavia_capensis.proCap1.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/procavia_capensis/dna/Procavia_capensis.proCap1.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/procavia_capensis/dna/Procavia_capensis.proCap1.69.dna.toplevel.fa.gz
FASTA
Procavia_capensis.proCap1.69.dna_rm.toplevel.fa
Ensembl
Procavia capensis
9813
proCap1
FASTA DNA sequence for Procavia capensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/procavia_capensis/dna/Procavia_capensis.proCap1.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/procavia_capensis/dna/Procavia_capensis.proCap1.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/procavia_capensis/dna/Procavia_capensis.proCap1.69.dna_rm.toplevel.fa.gz
FASTA
Procavia_capensis.proCap1.69.dna_sm.toplevel.fa
Ensembl
Procavia capensis
9813
proCap1
FASTA DNA sequence for Procavia capensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/procavia_capensis/dna/Procavia_capensis.proCap1.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/procavia_capensis/dna/Procavia_capensis.proCap1.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/procavia_capensis/dna/Procavia_capensis.proCap1.69.dna_sm.toplevel.fa.gz
FASTA
Procavia_capensis.proCap1.69.ncrna.fa
Ensembl
Procavia capensis
9813
proCap1
FASTA ncRNA sequence for Procavia capensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/procavia_capensis/ncrna/Procavia_capensis.proCap1.69.ncrna.fa.rz, ensembl/release-69/fasta/procavia_capensis/ncrna/Procavia_capensis.proCap1.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/procavia_capensis/ncrna/Procavia_capensis.proCap1.69.ncrna.fa.gz
FASTA
Procavia_capensis.proCap1.69.pep.all.fa
Ensembl
Procavia capensis
9813
proCap1
FASTA pep sequence for Procavia capensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/procavia_capensis/pep/Procavia_capensis.proCap1.69.pep.all.fa.rz, ensembl/release-69/fasta/procavia_capensis/pep/Procavia_capensis.proCap1.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/procavia_capensis/pep/Procavia_capensis.proCap1.69.pep.all.fa.gz
FASTA
Pteropus_vampyrus.pteVam1.69.cdna.all.fa
Ensembl
Pteropus vampyrus
132908
pteVam1
FASTA cDNA sequence for Pteropus vampyrus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/pteropus_vampyrus/cdna/Pteropus_vampyrus.pteVam1.69.cdna.all.fa.rz, ensembl/release-69/fasta/pteropus_vampyrus/cdna/Pteropus_vampyrus.pteVam1.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/pteropus_vampyrus/cdna/Pteropus_vampyrus.pteVam1.69.cdna.all.fa.gz
FASTA
Pteropus_vampyrus.pteVam1.69.dna.toplevel.fa
Ensembl
Pteropus vampyrus
132908
pteVam1
FASTA DNA sequence for Pteropus vampyrus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/pteropus_vampyrus/dna/Pteropus_vampyrus.pteVam1.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/pteropus_vampyrus/dna/Pteropus_vampyrus.pteVam1.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/pteropus_vampyrus/dna/Pteropus_vampyrus.pteVam1.69.dna.toplevel.fa.gz
FASTA
Pteropus_vampyrus.pteVam1.69.dna_rm.toplevel.fa
Ensembl
Pteropus vampyrus
132908
pteVam1
FASTA DNA sequence for Pteropus vampyrus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/pteropus_vampyrus/dna/Pteropus_vampyrus.pteVam1.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/pteropus_vampyrus/dna/Pteropus_vampyrus.pteVam1.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/pteropus_vampyrus/dna/Pteropus_vampyrus.pteVam1.69.dna_rm.toplevel.fa.gz
FASTA
Pteropus_vampyrus.pteVam1.69.dna_sm.toplevel.fa
Ensembl
Pteropus vampyrus
132908
pteVam1
FASTA DNA sequence for Pteropus vampyrus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/pteropus_vampyrus/dna/Pteropus_vampyrus.pteVam1.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/pteropus_vampyrus/dna/Pteropus_vampyrus.pteVam1.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/pteropus_vampyrus/dna/Pteropus_vampyrus.pteVam1.69.dna_sm.toplevel.fa.gz
FASTA
Pteropus_vampyrus.pteVam1.69.ncrna.fa
Ensembl
Pteropus vampyrus
132908
pteVam1
FASTA ncRNA sequence for Pteropus vampyrus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/pteropus_vampyrus/ncrna/Pteropus_vampyrus.pteVam1.69.ncrna.fa.rz, ensembl/release-69/fasta/pteropus_vampyrus/ncrna/Pteropus_vampyrus.pteVam1.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/pteropus_vampyrus/ncrna/Pteropus_vampyrus.pteVam1.69.ncrna.fa.gz
FASTA
Pteropus_vampyrus.pteVam1.69.pep.all.fa
Ensembl
Pteropus vampyrus
132908
pteVam1
FASTA pep sequence for Pteropus vampyrus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/pteropus_vampyrus/pep/Pteropus_vampyrus.pteVam1.69.pep.all.fa.rz, ensembl/release-69/fasta/pteropus_vampyrus/pep/Pteropus_vampyrus.pteVam1.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/pteropus_vampyrus/pep/Pteropus_vampyrus.pteVam1.69.pep.all.fa.gz
FASTA
Rattus_norvegicus.RGSC3.4.69.cdna.all.fa
Ensembl
Rattus norvegicus
10116
RGSC3.4
FASTA cDNA sequence for Rattus norvegicus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/rattus_norvegicus/cdna/Rattus_norvegicus.RGSC3.4.69.cdna.all.fa.rz, ensembl/release-69/fasta/rattus_norvegicus/cdna/Rattus_norvegicus.RGSC3.4.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/rattus_norvegicus/cdna/Rattus_norvegicus.RGSC3.4.69.cdna.all.fa.gz
FASTA
Rattus_norvegicus.RGSC3.4.69.dna.toplevel.fa
Ensembl
Rattus norvegicus
10116
RGSC3.4
FASTA DNA sequence for Rattus norvegicus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/rattus_norvegicus/dna/Rattus_norvegicus.RGSC3.4.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/rattus_norvegicus/dna/Rattus_norvegicus.RGSC3.4.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/rattus_norvegicus/dna/Rattus_norvegicus.RGSC3.4.69.dna.toplevel.fa.gz
FASTA
Rattus_norvegicus.RGSC3.4.69.dna_rm.toplevel.fa
Ensembl
Rattus norvegicus
10116
RGSC3.4
FASTA DNA sequence for Rattus norvegicus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/rattus_norvegicus/dna/Rattus_norvegicus.RGSC3.4.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/rattus_norvegicus/dna/Rattus_norvegicus.RGSC3.4.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/rattus_norvegicus/dna/Rattus_norvegicus.RGSC3.4.69.dna_rm.toplevel.fa.gz
FASTA
Rattus_norvegicus.RGSC3.4.69.dna_sm.toplevel.fa
Ensembl
Rattus norvegicus
10116
RGSC3.4
FASTA DNA sequence for Rattus norvegicus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/rattus_norvegicus/dna/Rattus_norvegicus.RGSC3.4.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/rattus_norvegicus/dna/Rattus_norvegicus.RGSC3.4.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/rattus_norvegicus/dna/Rattus_norvegicus.RGSC3.4.69.dna_sm.toplevel.fa.gz
FASTA
Rattus_norvegicus.RGSC3.4.69.ncrna.fa
Ensembl
Rattus norvegicus
10116
RGSC3.4
FASTA ncRNA sequence for Rattus norvegicus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/rattus_norvegicus/ncrna/Rattus_norvegicus.RGSC3.4.69.ncrna.fa.rz, ensembl/release-69/fasta/rattus_norvegicus/ncrna/Rattus_norvegicus.RGSC3.4.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/rattus_norvegicus/ncrna/Rattus_norvegicus.RGSC3.4.69.ncrna.fa.gz
FASTA
Rattus_norvegicus.RGSC3.4.69.pep.all.fa
Ensembl
Rattus norvegicus
10116
RGSC3.4
FASTA pep sequence for Rattus norvegicus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/rattus_norvegicus/pep/Rattus_norvegicus.RGSC3.4.69.pep.all.fa.rz, ensembl/release-69/fasta/rattus_norvegicus/pep/Rattus_norvegicus.RGSC3.4.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/rattus_norvegicus/pep/Rattus_norvegicus.RGSC3.4.69.pep.all.fa.gz
FASTA
Saccharomyces_cerevisiae.EF4.69.cdna.all.fa
Ensembl
Saccharomyces cerevisiae
4932
EF4
FASTA cDNA sequence for Saccharomyces cerevisiae
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/saccharomyces_cerevisiae/cdna/Saccharomyces_cerevisiae.EF4.69.cdna.all.fa.rz, ensembl/release-69/fasta/saccharomyces_cerevisiae/cdna/Saccharomyces_cerevisiae.EF4.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/saccharomyces_cerevisiae/cdna/Saccharomyces_cerevisiae.EF4.69.cdna.all.fa.gz
FASTA
Saccharomyces_cerevisiae.EF4.69.dna.toplevel.fa
Ensembl
Saccharomyces cerevisiae
4932
EF4
FASTA DNA sequence for Saccharomyces cerevisiae
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/saccharomyces_cerevisiae/dna/Saccharomyces_cerevisiae.EF4.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/saccharomyces_cerevisiae/dna/Saccharomyces_cerevisiae.EF4.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/saccharomyces_cerevisiae/dna/Saccharomyces_cerevisiae.EF4.69.dna.toplevel.fa.gz
FASTA
Saccharomyces_cerevisiae.EF4.69.dna_rm.toplevel.fa
Ensembl
Saccharomyces cerevisiae
4932
EF4
FASTA DNA sequence for Saccharomyces cerevisiae
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/saccharomyces_cerevisiae/dna/Saccharomyces_cerevisiae.EF4.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/saccharomyces_cerevisiae/dna/Saccharomyces_cerevisiae.EF4.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/saccharomyces_cerevisiae/dna/Saccharomyces_cerevisiae.EF4.69.dna_rm.toplevel.fa.gz
FASTA
Saccharomyces_cerevisiae.EF4.69.dna_sm.toplevel.fa
Ensembl
Saccharomyces cerevisiae
4932
EF4
FASTA DNA sequence for Saccharomyces cerevisiae
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/saccharomyces_cerevisiae/dna/Saccharomyces_cerevisiae.EF4.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/saccharomyces_cerevisiae/dna/Saccharomyces_cerevisiae.EF4.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/saccharomyces_cerevisiae/dna/Saccharomyces_cerevisiae.EF4.69.dna_sm.toplevel.fa.gz
FASTA
Saccharomyces_cerevisiae.EF4.69.ncrna.fa
Ensembl
Saccharomyces cerevisiae
4932
EF4
FASTA ncRNA sequence for Saccharomyces cerevisiae
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/saccharomyces_cerevisiae/ncrna/Saccharomyces_cerevisiae.EF4.69.ncrna.fa.rz, ensembl/release-69/fasta/saccharomyces_cerevisiae/ncrna/Saccharomyces_cerevisiae.EF4.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/saccharomyces_cerevisiae/ncrna/Saccharomyces_cerevisiae.EF4.69.ncrna.fa.gz
FASTA
Saccharomyces_cerevisiae.EF4.69.pep.all.fa
Ensembl
Saccharomyces cerevisiae
4932
EF4
FASTA pep sequence for Saccharomyces cerevisiae
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/saccharomyces_cerevisiae/pep/Saccharomyces_cerevisiae.EF4.69.pep.all.fa.rz, ensembl/release-69/fasta/saccharomyces_cerevisiae/pep/Saccharomyces_cerevisiae.EF4.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/saccharomyces_cerevisiae/pep/Saccharomyces_cerevisiae.EF4.69.pep.all.fa.gz
FASTA
Sarcophilus_harrisii.DEVIL7.0.69.cdna.all.fa
Ensembl
Sarcophilus harrisii
9305
DEVIL7.0
FASTA cDNA sequence for Sarcophilus harrisii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/sarcophilus_harrisii/cdna/Sarcophilus_harrisii.DEVIL7.0.69.cdna.all.fa.rz, ensembl/release-69/fasta/sarcophilus_harrisii/cdna/Sarcophilus_harrisii.DEVIL7.0.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/sarcophilus_harrisii/cdna/Sarcophilus_harrisii.DEVIL7.0.69.cdna.all.fa.gz
FASTA
Sarcophilus_harrisii.DEVIL7.0.69.dna.toplevel.fa
Ensembl
Sarcophilus harrisii
9305
DEVIL7.0
FASTA DNA sequence for Sarcophilus harrisii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/sarcophilus_harrisii/dna/Sarcophilus_harrisii.DEVIL7.0.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/sarcophilus_harrisii/dna/Sarcophilus_harrisii.DEVIL7.0.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/sarcophilus_harrisii/dna/Sarcophilus_harrisii.DEVIL7.0.69.dna.toplevel.fa.gz
FASTA
Sarcophilus_harrisii.DEVIL7.0.69.dna_rm.toplevel.fa
Ensembl
Sarcophilus harrisii
9305
DEVIL7.0
FASTA DNA sequence for Sarcophilus harrisii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/sarcophilus_harrisii/dna/Sarcophilus_harrisii.DEVIL7.0.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/sarcophilus_harrisii/dna/Sarcophilus_harrisii.DEVIL7.0.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/sarcophilus_harrisii/dna/Sarcophilus_harrisii.DEVIL7.0.69.dna_rm.toplevel.fa.gz
FASTA
Sarcophilus_harrisii.DEVIL7.0.69.dna_sm.toplevel.fa
Ensembl
Sarcophilus harrisii
9305
DEVIL7.0
FASTA DNA sequence for Sarcophilus harrisii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/sarcophilus_harrisii/dna/Sarcophilus_harrisii.DEVIL7.0.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/sarcophilus_harrisii/dna/Sarcophilus_harrisii.DEVIL7.0.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/sarcophilus_harrisii/dna/Sarcophilus_harrisii.DEVIL7.0.69.dna_sm.toplevel.fa.gz
FASTA
Sarcophilus_harrisii.DEVIL7.0.69.ncrna.fa
Ensembl
Sarcophilus harrisii
9305
DEVIL7.0
FASTA ncRNA sequence for Sarcophilus harrisii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/sarcophilus_harrisii/ncrna/Sarcophilus_harrisii.DEVIL7.0.69.ncrna.fa.rz, ensembl/release-69/fasta/sarcophilus_harrisii/ncrna/Sarcophilus_harrisii.DEVIL7.0.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/sarcophilus_harrisii/ncrna/Sarcophilus_harrisii.DEVIL7.0.69.ncrna.fa.gz
FASTA
Sarcophilus_harrisii.DEVIL7.0.69.pep.all.fa
Ensembl
Sarcophilus harrisii
9305
DEVIL7.0
FASTA pep sequence for Sarcophilus harrisii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/sarcophilus_harrisii/pep/Sarcophilus_harrisii.DEVIL7.0.69.pep.all.fa.rz, ensembl/release-69/fasta/sarcophilus_harrisii/pep/Sarcophilus_harrisii.DEVIL7.0.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/sarcophilus_harrisii/pep/Sarcophilus_harrisii.DEVIL7.0.69.pep.all.fa.gz
FASTA
Sorex_araneus.COMMON_SHREW1.69.cdna.all.fa
Ensembl
Sorex araneus
42254
COMMON_SHREW1
FASTA cDNA sequence for Sorex araneus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/sorex_araneus/cdna/Sorex_araneus.COMMON_SHREW1.69.cdna.all.fa.rz, ensembl/release-69/fasta/sorex_araneus/cdna/Sorex_araneus.COMMON_SHREW1.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/sorex_araneus/cdna/Sorex_araneus.COMMON_SHREW1.69.cdna.all.fa.gz
FASTA
Sorex_araneus.COMMON_SHREW1.69.dna.toplevel.fa
Ensembl
Sorex araneus
42254
COMMON_SHREW1
FASTA DNA sequence for Sorex araneus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/sorex_araneus/dna/Sorex_araneus.COMMON_SHREW1.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/sorex_araneus/dna/Sorex_araneus.COMMON_SHREW1.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/sorex_araneus/dna/Sorex_araneus.COMMON_SHREW1.69.dna.toplevel.fa.gz
FASTA
Sorex_araneus.COMMON_SHREW1.69.dna_rm.toplevel.fa
Ensembl
Sorex araneus
42254
COMMON_SHREW1
FASTA DNA sequence for Sorex araneus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/sorex_araneus/dna/Sorex_araneus.COMMON_SHREW1.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/sorex_araneus/dna/Sorex_araneus.COMMON_SHREW1.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/sorex_araneus/dna/Sorex_araneus.COMMON_SHREW1.69.dna_rm.toplevel.fa.gz
FASTA
Sorex_araneus.COMMON_SHREW1.69.dna_sm.toplevel.fa
Ensembl
Sorex araneus
42254
COMMON_SHREW1
FASTA DNA sequence for Sorex araneus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/sorex_araneus/dna/Sorex_araneus.COMMON_SHREW1.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/sorex_araneus/dna/Sorex_araneus.COMMON_SHREW1.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/sorex_araneus/dna/Sorex_araneus.COMMON_SHREW1.69.dna_sm.toplevel.fa.gz
FASTA
Sorex_araneus.COMMON_SHREW1.69.ncrna.fa
Ensembl
Sorex araneus
42254
COMMON_SHREW1
FASTA ncRNA sequence for Sorex araneus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/sorex_araneus/ncrna/Sorex_araneus.COMMON_SHREW1.69.ncrna.fa.rz, ensembl/release-69/fasta/sorex_araneus/ncrna/Sorex_araneus.COMMON_SHREW1.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/sorex_araneus/ncrna/Sorex_araneus.COMMON_SHREW1.69.ncrna.fa.gz
FASTA
Sorex_araneus.COMMON_SHREW1.69.pep.all.fa
Ensembl
Sorex araneus
42254
COMMON_SHREW1
FASTA pep sequence for Sorex araneus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/sorex_araneus/pep/Sorex_araneus.COMMON_SHREW1.69.pep.all.fa.rz, ensembl/release-69/fasta/sorex_araneus/pep/Sorex_araneus.COMMON_SHREW1.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/sorex_araneus/pep/Sorex_araneus.COMMON_SHREW1.69.pep.all.fa.gz
FASTA
Sus_scrofa.Sscrofa10.2.69.cdna.all.fa
Ensembl
Sus scrofa
9823
Sscrofa10.2
FASTA cDNA sequence for Sus scrofa
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/sus_scrofa/cdna/Sus_scrofa.Sscrofa10.2.69.cdna.all.fa.rz, ensembl/release-69/fasta/sus_scrofa/cdna/Sus_scrofa.Sscrofa10.2.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/sus_scrofa/cdna/Sus_scrofa.Sscrofa10.2.69.cdna.all.fa.gz
FASTA
Sus_scrofa.Sscrofa10.2.69.dna.toplevel.fa
Ensembl
Sus scrofa
9823
Sscrofa10.2
FASTA DNA sequence for Sus scrofa
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/sus_scrofa/dna/Sus_scrofa.Sscrofa10.2.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/sus_scrofa/dna/Sus_scrofa.Sscrofa10.2.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/sus_scrofa/dna/Sus_scrofa.Sscrofa10.2.69.dna.toplevel.fa.gz
FASTA
Sus_scrofa.Sscrofa10.2.69.dna_rm.toplevel.fa
Ensembl
Sus scrofa
9823
Sscrofa10.2
FASTA DNA sequence for Sus scrofa
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/sus_scrofa/dna/Sus_scrofa.Sscrofa10.2.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/sus_scrofa/dna/Sus_scrofa.Sscrofa10.2.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/sus_scrofa/dna/Sus_scrofa.Sscrofa10.2.69.dna_rm.toplevel.fa.gz
FASTA
Sus_scrofa.Sscrofa10.2.69.dna_sm.toplevel.fa
Ensembl
Sus scrofa
9823
Sscrofa10.2
FASTA DNA sequence for Sus scrofa
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/sus_scrofa/dna/Sus_scrofa.Sscrofa10.2.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/sus_scrofa/dna/Sus_scrofa.Sscrofa10.2.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/sus_scrofa/dna/Sus_scrofa.Sscrofa10.2.69.dna_sm.toplevel.fa.gz
FASTA
Sus_scrofa.Sscrofa10.2.69.ncrna.fa
Ensembl
Sus scrofa
9823
Sscrofa10.2
FASTA ncRNA sequence for Sus scrofa
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/sus_scrofa/ncrna/Sus_scrofa.Sscrofa10.2.69.ncrna.fa.rz, ensembl/release-69/fasta/sus_scrofa/ncrna/Sus_scrofa.Sscrofa10.2.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/sus_scrofa/ncrna/Sus_scrofa.Sscrofa10.2.69.ncrna.fa.gz
FASTA
Sus_scrofa.Sscrofa10.2.69.pep.all.fa
Ensembl
Sus scrofa
9823
Sscrofa10.2
FASTA pep sequence for Sus scrofa
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/sus_scrofa/pep/Sus_scrofa.Sscrofa10.2.69.pep.all.fa.rz, ensembl/release-69/fasta/sus_scrofa/pep/Sus_scrofa.Sscrofa10.2.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/sus_scrofa/pep/Sus_scrofa.Sscrofa10.2.69.pep.all.fa.gz
FASTA
Taeniopygia_guttata.taeGut3.2.4.69.cdna.all.fa
Ensembl
Taeniopygia guttata
59729
taeGut3.2.4
FASTA cDNA sequence for Taeniopygia guttata
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/taeniopygia_guttata/cdna/Taeniopygia_guttata.taeGut3.2.4.69.cdna.all.fa.rz, ensembl/release-69/fasta/taeniopygia_guttata/cdna/Taeniopygia_guttata.taeGut3.2.4.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/taeniopygia_guttata/cdna/Taeniopygia_guttata.taeGut3.2.4.69.cdna.all.fa.gz
FASTA
Taeniopygia_guttata.taeGut3.2.4.69.dna.toplevel.fa
Ensembl
Taeniopygia guttata
59729
taeGut3.2.4
FASTA DNA sequence for Taeniopygia guttata
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/taeniopygia_guttata/dna/Taeniopygia_guttata.taeGut3.2.4.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/taeniopygia_guttata/dna/Taeniopygia_guttata.taeGut3.2.4.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/taeniopygia_guttata/dna/Taeniopygia_guttata.taeGut3.2.4.69.dna.toplevel.fa.gz
FASTA
Taeniopygia_guttata.taeGut3.2.4.69.dna_rm.toplevel.fa
Ensembl
Taeniopygia guttata
59729
taeGut3.2.4
FASTA DNA sequence for Taeniopygia guttata
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/taeniopygia_guttata/dna/Taeniopygia_guttata.taeGut3.2.4.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/taeniopygia_guttata/dna/Taeniopygia_guttata.taeGut3.2.4.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/taeniopygia_guttata/dna/Taeniopygia_guttata.taeGut3.2.4.69.dna_rm.toplevel.fa.gz
FASTA
Taeniopygia_guttata.taeGut3.2.4.69.dna_sm.toplevel.fa
Ensembl
Taeniopygia guttata
59729
taeGut3.2.4
FASTA DNA sequence for Taeniopygia guttata
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/taeniopygia_guttata/dna/Taeniopygia_guttata.taeGut3.2.4.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/taeniopygia_guttata/dna/Taeniopygia_guttata.taeGut3.2.4.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/taeniopygia_guttata/dna/Taeniopygia_guttata.taeGut3.2.4.69.dna_sm.toplevel.fa.gz
FASTA
Taeniopygia_guttata.taeGut3.2.4.69.ncrna.fa
Ensembl
Taeniopygia guttata
59729
taeGut3.2.4
FASTA ncRNA sequence for Taeniopygia guttata
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/taeniopygia_guttata/ncrna/Taeniopygia_guttata.taeGut3.2.4.69.ncrna.fa.rz, ensembl/release-69/fasta/taeniopygia_guttata/ncrna/Taeniopygia_guttata.taeGut3.2.4.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/taeniopygia_guttata/ncrna/Taeniopygia_guttata.taeGut3.2.4.69.ncrna.fa.gz
FASTA
Taeniopygia_guttata.taeGut3.2.4.69.pep.all.fa
Ensembl
Taeniopygia guttata
59729
taeGut3.2.4
FASTA pep sequence for Taeniopygia guttata
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/taeniopygia_guttata/pep/Taeniopygia_guttata.taeGut3.2.4.69.pep.all.fa.rz, ensembl/release-69/fasta/taeniopygia_guttata/pep/Taeniopygia_guttata.taeGut3.2.4.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/taeniopygia_guttata/pep/Taeniopygia_guttata.taeGut3.2.4.69.pep.all.fa.gz
FASTA
Takifugu_rubripes.FUGU4.69.cdna.all.fa
Ensembl
Takifugu rubripes
31033
FUGU4
FASTA cDNA sequence for Takifugu rubripes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/takifugu_rubripes/cdna/Takifugu_rubripes.FUGU4.69.cdna.all.fa.rz, ensembl/release-69/fasta/takifugu_rubripes/cdna/Takifugu_rubripes.FUGU4.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/takifugu_rubripes/cdna/Takifugu_rubripes.FUGU4.69.cdna.all.fa.gz
FASTA
Takifugu_rubripes.FUGU4.69.dna.toplevel.fa
Ensembl
Takifugu rubripes
31033
FUGU4
FASTA DNA sequence for Takifugu rubripes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/takifugu_rubripes/dna/Takifugu_rubripes.FUGU4.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/takifugu_rubripes/dna/Takifugu_rubripes.FUGU4.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/takifugu_rubripes/dna/Takifugu_rubripes.FUGU4.69.dna.toplevel.fa.gz
FASTA
Takifugu_rubripes.FUGU4.69.dna_rm.toplevel.fa
Ensembl
Takifugu rubripes
31033
FUGU4
FASTA DNA sequence for Takifugu rubripes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/takifugu_rubripes/dna/Takifugu_rubripes.FUGU4.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/takifugu_rubripes/dna/Takifugu_rubripes.FUGU4.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/takifugu_rubripes/dna/Takifugu_rubripes.FUGU4.69.dna_rm.toplevel.fa.gz
FASTA
Takifugu_rubripes.FUGU4.69.dna_sm.toplevel.fa
Ensembl
Takifugu rubripes
31033
FUGU4
FASTA DNA sequence for Takifugu rubripes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/takifugu_rubripes/dna/Takifugu_rubripes.FUGU4.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/takifugu_rubripes/dna/Takifugu_rubripes.FUGU4.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/takifugu_rubripes/dna/Takifugu_rubripes.FUGU4.69.dna_sm.toplevel.fa.gz
FASTA
Takifugu_rubripes.FUGU4.69.ncrna.fa
Ensembl
Takifugu rubripes
31033
FUGU4
FASTA ncRNA sequence for Takifugu rubripes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/takifugu_rubripes/ncrna/Takifugu_rubripes.FUGU4.69.ncrna.fa.rz, ensembl/release-69/fasta/takifugu_rubripes/ncrna/Takifugu_rubripes.FUGU4.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/takifugu_rubripes/ncrna/Takifugu_rubripes.FUGU4.69.ncrna.fa.gz
FASTA
Takifugu_rubripes.FUGU4.69.pep.all.fa
Ensembl
Takifugu rubripes
31033
FUGU4
FASTA pep sequence for Takifugu rubripes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/takifugu_rubripes/pep/Takifugu_rubripes.FUGU4.69.pep.all.fa.rz, ensembl/release-69/fasta/takifugu_rubripes/pep/Takifugu_rubripes.FUGU4.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/takifugu_rubripes/pep/Takifugu_rubripes.FUGU4.69.pep.all.fa.gz
FASTA
Tarsius_syrichta.tarSyr1.69.cdna.all.fa
Ensembl
Tarsius syrichta
1868482
tarSyr1
FASTA cDNA sequence for Tarsius syrichta
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/tarsius_syrichta/cdna/Tarsius_syrichta.tarSyr1.69.cdna.all.fa.rz, ensembl/release-69/fasta/tarsius_syrichta/cdna/Tarsius_syrichta.tarSyr1.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/tarsius_syrichta/cdna/Tarsius_syrichta.tarSyr1.69.cdna.all.fa.gz
FASTA
Tarsius_syrichta.tarSyr1.69.dna.toplevel.fa
Ensembl
Tarsius syrichta
1868482
tarSyr1
FASTA DNA sequence for Tarsius syrichta
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/tarsius_syrichta/dna/Tarsius_syrichta.tarSyr1.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/tarsius_syrichta/dna/Tarsius_syrichta.tarSyr1.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/tarsius_syrichta/dna/Tarsius_syrichta.tarSyr1.69.dna.toplevel.fa.gz
FASTA
Tarsius_syrichta.tarSyr1.69.dna_rm.toplevel.fa
Ensembl
Tarsius syrichta
1868482
tarSyr1
FASTA DNA sequence for Tarsius syrichta
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/tarsius_syrichta/dna/Tarsius_syrichta.tarSyr1.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/tarsius_syrichta/dna/Tarsius_syrichta.tarSyr1.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/tarsius_syrichta/dna/Tarsius_syrichta.tarSyr1.69.dna_rm.toplevel.fa.gz
FASTA
Tarsius_syrichta.tarSyr1.69.dna_sm.toplevel.fa
Ensembl
Tarsius syrichta
1868482
tarSyr1
FASTA DNA sequence for Tarsius syrichta
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/tarsius_syrichta/dna/Tarsius_syrichta.tarSyr1.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/tarsius_syrichta/dna/Tarsius_syrichta.tarSyr1.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/tarsius_syrichta/dna/Tarsius_syrichta.tarSyr1.69.dna_sm.toplevel.fa.gz
FASTA
Tarsius_syrichta.tarSyr1.69.ncrna.fa
Ensembl
Tarsius syrichta
1868482
tarSyr1
FASTA ncRNA sequence for Tarsius syrichta
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/tarsius_syrichta/ncrna/Tarsius_syrichta.tarSyr1.69.ncrna.fa.rz, ensembl/release-69/fasta/tarsius_syrichta/ncrna/Tarsius_syrichta.tarSyr1.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/tarsius_syrichta/ncrna/Tarsius_syrichta.tarSyr1.69.ncrna.fa.gz
FASTA
Tarsius_syrichta.tarSyr1.69.pep.all.fa
Ensembl
Tarsius syrichta
1868482
tarSyr1
FASTA pep sequence for Tarsius syrichta
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/tarsius_syrichta/pep/Tarsius_syrichta.tarSyr1.69.pep.all.fa.rz, ensembl/release-69/fasta/tarsius_syrichta/pep/Tarsius_syrichta.tarSyr1.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/tarsius_syrichta/pep/Tarsius_syrichta.tarSyr1.69.pep.all.fa.gz
FASTA
Tetraodon_nigroviridis.TETRAODON8.69.cdna.all.fa
Ensembl
Tetraodon nigroviridis
99883
TETRAODON8
FASTA cDNA sequence for Tetraodon nigroviridis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/tetraodon_nigroviridis/cdna/Tetraodon_nigroviridis.TETRAODON8.69.cdna.all.fa.rz, ensembl/release-69/fasta/tetraodon_nigroviridis/cdna/Tetraodon_nigroviridis.TETRAODON8.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/tetraodon_nigroviridis/cdna/Tetraodon_nigroviridis.TETRAODON8.69.cdna.all.fa.gz
FASTA
Tetraodon_nigroviridis.TETRAODON8.69.dna.toplevel.fa
Ensembl
Tetraodon nigroviridis
99883
TETRAODON8
FASTA DNA sequence for Tetraodon nigroviridis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/tetraodon_nigroviridis/dna/Tetraodon_nigroviridis.TETRAODON8.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/tetraodon_nigroviridis/dna/Tetraodon_nigroviridis.TETRAODON8.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/tetraodon_nigroviridis/dna/Tetraodon_nigroviridis.TETRAODON8.69.dna.toplevel.fa.gz
FASTA
Tetraodon_nigroviridis.TETRAODON8.69.dna_rm.toplevel.fa
Ensembl
Tetraodon nigroviridis
99883
TETRAODON8
FASTA DNA sequence for Tetraodon nigroviridis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/tetraodon_nigroviridis/dna/Tetraodon_nigroviridis.TETRAODON8.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/tetraodon_nigroviridis/dna/Tetraodon_nigroviridis.TETRAODON8.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/tetraodon_nigroviridis/dna/Tetraodon_nigroviridis.TETRAODON8.69.dna_rm.toplevel.fa.gz
FASTA
Tetraodon_nigroviridis.TETRAODON8.69.dna_sm.toplevel.fa
Ensembl
Tetraodon nigroviridis
99883
TETRAODON8
FASTA DNA sequence for Tetraodon nigroviridis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/tetraodon_nigroviridis/dna/Tetraodon_nigroviridis.TETRAODON8.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/tetraodon_nigroviridis/dna/Tetraodon_nigroviridis.TETRAODON8.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/tetraodon_nigroviridis/dna/Tetraodon_nigroviridis.TETRAODON8.69.dna_sm.toplevel.fa.gz
FASTA
Tetraodon_nigroviridis.TETRAODON8.69.ncrna.fa
Ensembl
Tetraodon nigroviridis
99883
TETRAODON8
FASTA ncRNA sequence for Tetraodon nigroviridis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/tetraodon_nigroviridis/ncrna/Tetraodon_nigroviridis.TETRAODON8.69.ncrna.fa.rz, ensembl/release-69/fasta/tetraodon_nigroviridis/ncrna/Tetraodon_nigroviridis.TETRAODON8.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/tetraodon_nigroviridis/ncrna/Tetraodon_nigroviridis.TETRAODON8.69.ncrna.fa.gz
FASTA
Tetraodon_nigroviridis.TETRAODON8.69.pep.all.fa
Ensembl
Tetraodon nigroviridis
99883
TETRAODON8
FASTA pep sequence for Tetraodon nigroviridis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/tetraodon_nigroviridis/pep/Tetraodon_nigroviridis.TETRAODON8.69.pep.all.fa.rz, ensembl/release-69/fasta/tetraodon_nigroviridis/pep/Tetraodon_nigroviridis.TETRAODON8.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/tetraodon_nigroviridis/pep/Tetraodon_nigroviridis.TETRAODON8.69.pep.all.fa.gz
FASTA
Tupaia_belangeri.TREESHREW.69.cdna.all.fa
Ensembl
Tupaia belangeri
37347
TREESHREW
FASTA cDNA sequence for Tupaia belangeri
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/tupaia_belangeri/cdna/Tupaia_belangeri.TREESHREW.69.cdna.all.fa.rz, ensembl/release-69/fasta/tupaia_belangeri/cdna/Tupaia_belangeri.TREESHREW.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/tupaia_belangeri/cdna/Tupaia_belangeri.TREESHREW.69.cdna.all.fa.gz
FASTA
Tupaia_belangeri.TREESHREW.69.dna.toplevel.fa
Ensembl
Tupaia belangeri
37347
TREESHREW
FASTA DNA sequence for Tupaia belangeri
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/tupaia_belangeri/dna/Tupaia_belangeri.TREESHREW.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/tupaia_belangeri/dna/Tupaia_belangeri.TREESHREW.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/tupaia_belangeri/dna/Tupaia_belangeri.TREESHREW.69.dna.toplevel.fa.gz
FASTA
Tupaia_belangeri.TREESHREW.69.dna_rm.toplevel.fa
Ensembl
Tupaia belangeri
37347
TREESHREW
FASTA DNA sequence for Tupaia belangeri
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/tupaia_belangeri/dna/Tupaia_belangeri.TREESHREW.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/tupaia_belangeri/dna/Tupaia_belangeri.TREESHREW.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/tupaia_belangeri/dna/Tupaia_belangeri.TREESHREW.69.dna_rm.toplevel.fa.gz
FASTA
Tupaia_belangeri.TREESHREW.69.dna_sm.toplevel.fa
Ensembl
Tupaia belangeri
37347
TREESHREW
FASTA DNA sequence for Tupaia belangeri
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/tupaia_belangeri/dna/Tupaia_belangeri.TREESHREW.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/tupaia_belangeri/dna/Tupaia_belangeri.TREESHREW.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/tupaia_belangeri/dna/Tupaia_belangeri.TREESHREW.69.dna_sm.toplevel.fa.gz
FASTA
Tupaia_belangeri.TREESHREW.69.ncrna.fa
Ensembl
Tupaia belangeri
37347
TREESHREW
FASTA ncRNA sequence for Tupaia belangeri
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/tupaia_belangeri/ncrna/Tupaia_belangeri.TREESHREW.69.ncrna.fa.rz, ensembl/release-69/fasta/tupaia_belangeri/ncrna/Tupaia_belangeri.TREESHREW.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/tupaia_belangeri/ncrna/Tupaia_belangeri.TREESHREW.69.ncrna.fa.gz
FASTA
Tupaia_belangeri.TREESHREW.69.pep.all.fa
Ensembl
Tupaia belangeri
37347
TREESHREW
FASTA pep sequence for Tupaia belangeri
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/tupaia_belangeri/pep/Tupaia_belangeri.TREESHREW.69.pep.all.fa.rz, ensembl/release-69/fasta/tupaia_belangeri/pep/Tupaia_belangeri.TREESHREW.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/tupaia_belangeri/pep/Tupaia_belangeri.TREESHREW.69.pep.all.fa.gz
FASTA
Tursiops_truncatus.turTru1.69.cdna.all.fa
Ensembl
Tursiops truncatus
9739
turTru1
FASTA cDNA sequence for Tursiops truncatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/tursiops_truncatus/cdna/Tursiops_truncatus.turTru1.69.cdna.all.fa.rz, ensembl/release-69/fasta/tursiops_truncatus/cdna/Tursiops_truncatus.turTru1.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/tursiops_truncatus/cdna/Tursiops_truncatus.turTru1.69.cdna.all.fa.gz
FASTA
Tursiops_truncatus.turTru1.69.dna.toplevel.fa
Ensembl
Tursiops truncatus
9739
turTru1
FASTA DNA sequence for Tursiops truncatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/tursiops_truncatus/dna/Tursiops_truncatus.turTru1.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/tursiops_truncatus/dna/Tursiops_truncatus.turTru1.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/tursiops_truncatus/dna/Tursiops_truncatus.turTru1.69.dna.toplevel.fa.gz
FASTA
Tursiops_truncatus.turTru1.69.dna_rm.toplevel.fa
Ensembl
Tursiops truncatus
9739
turTru1
FASTA DNA sequence for Tursiops truncatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/tursiops_truncatus/dna/Tursiops_truncatus.turTru1.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/tursiops_truncatus/dna/Tursiops_truncatus.turTru1.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/tursiops_truncatus/dna/Tursiops_truncatus.turTru1.69.dna_rm.toplevel.fa.gz
FASTA
Tursiops_truncatus.turTru1.69.dna_sm.toplevel.fa
Ensembl
Tursiops truncatus
9739
turTru1
FASTA DNA sequence for Tursiops truncatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/tursiops_truncatus/dna/Tursiops_truncatus.turTru1.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/tursiops_truncatus/dna/Tursiops_truncatus.turTru1.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/tursiops_truncatus/dna/Tursiops_truncatus.turTru1.69.dna_sm.toplevel.fa.gz
FASTA
Tursiops_truncatus.turTru1.69.ncrna.fa
Ensembl
Tursiops truncatus
9739
turTru1
FASTA ncRNA sequence for Tursiops truncatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/tursiops_truncatus/ncrna/Tursiops_truncatus.turTru1.69.ncrna.fa.rz, ensembl/release-69/fasta/tursiops_truncatus/ncrna/Tursiops_truncatus.turTru1.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/tursiops_truncatus/ncrna/Tursiops_truncatus.turTru1.69.ncrna.fa.gz
FASTA
Tursiops_truncatus.turTru1.69.pep.all.fa
Ensembl
Tursiops truncatus
9739
turTru1
FASTA pep sequence for Tursiops truncatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/tursiops_truncatus/pep/Tursiops_truncatus.turTru1.69.pep.all.fa.rz, ensembl/release-69/fasta/tursiops_truncatus/pep/Tursiops_truncatus.turTru1.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/tursiops_truncatus/pep/Tursiops_truncatus.turTru1.69.pep.all.fa.gz
FASTA
Vicugna_pacos.vicPac1.69.cdna.all.fa
Ensembl
Vicugna pacos
30538
vicPac1
FASTA cDNA sequence for Vicugna pacos
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/vicugna_pacos/cdna/Vicugna_pacos.vicPac1.69.cdna.all.fa.rz, ensembl/release-69/fasta/vicugna_pacos/cdna/Vicugna_pacos.vicPac1.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/vicugna_pacos/cdna/Vicugna_pacos.vicPac1.69.cdna.all.fa.gz
FASTA
Vicugna_pacos.vicPac1.69.dna.toplevel.fa
Ensembl
Vicugna pacos
30538
vicPac1
FASTA DNA sequence for Vicugna pacos
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/vicugna_pacos/dna/Vicugna_pacos.vicPac1.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/vicugna_pacos/dna/Vicugna_pacos.vicPac1.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/vicugna_pacos/dna/Vicugna_pacos.vicPac1.69.dna.toplevel.fa.gz
FASTA
Vicugna_pacos.vicPac1.69.dna_rm.toplevel.fa
Ensembl
Vicugna pacos
30538
vicPac1
FASTA DNA sequence for Vicugna pacos
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/vicugna_pacos/dna/Vicugna_pacos.vicPac1.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/vicugna_pacos/dna/Vicugna_pacos.vicPac1.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/vicugna_pacos/dna/Vicugna_pacos.vicPac1.69.dna_rm.toplevel.fa.gz
FASTA
Vicugna_pacos.vicPac1.69.dna_sm.toplevel.fa
Ensembl
Vicugna pacos
30538
vicPac1
FASTA DNA sequence for Vicugna pacos
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/vicugna_pacos/dna/Vicugna_pacos.vicPac1.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/vicugna_pacos/dna/Vicugna_pacos.vicPac1.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/vicugna_pacos/dna/Vicugna_pacos.vicPac1.69.dna_sm.toplevel.fa.gz
FASTA
Vicugna_pacos.vicPac1.69.ncrna.fa
Ensembl
Vicugna pacos
30538
vicPac1
FASTA ncRNA sequence for Vicugna pacos
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/vicugna_pacos/ncrna/Vicugna_pacos.vicPac1.69.ncrna.fa.rz, ensembl/release-69/fasta/vicugna_pacos/ncrna/Vicugna_pacos.vicPac1.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/vicugna_pacos/ncrna/Vicugna_pacos.vicPac1.69.ncrna.fa.gz
FASTA
Vicugna_pacos.vicPac1.69.pep.all.fa
Ensembl
Vicugna pacos
30538
vicPac1
FASTA pep sequence for Vicugna pacos
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/vicugna_pacos/pep/Vicugna_pacos.vicPac1.69.pep.all.fa.rz, ensembl/release-69/fasta/vicugna_pacos/pep/Vicugna_pacos.vicPac1.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/vicugna_pacos/pep/Vicugna_pacos.vicPac1.69.pep.all.fa.gz
FASTA
Xenopus_tropicalis.JGI_4.2.69.cdna.all.fa
Ensembl
Xenopus tropicalis
8364
JGI_4.2
FASTA cDNA sequence for Xenopus tropicalis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/xenopus_tropicalis/cdna/Xenopus_tropicalis.JGI_4.2.69.cdna.all.fa.rz, ensembl/release-69/fasta/xenopus_tropicalis/cdna/Xenopus_tropicalis.JGI_4.2.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/xenopus_tropicalis/cdna/Xenopus_tropicalis.JGI_4.2.69.cdna.all.fa.gz
FASTA
Xenopus_tropicalis.JGI_4.2.69.dna.toplevel.fa
Ensembl
Xenopus tropicalis
8364
JGI_4.2
FASTA DNA sequence for Xenopus tropicalis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/xenopus_tropicalis/dna/Xenopus_tropicalis.JGI_4.2.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/xenopus_tropicalis/dna/Xenopus_tropicalis.JGI_4.2.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/xenopus_tropicalis/dna/Xenopus_tropicalis.JGI_4.2.69.dna.toplevel.fa.gz
FASTA
Xenopus_tropicalis.JGI_4.2.69.dna_rm.toplevel.fa
Ensembl
Xenopus tropicalis
8364
JGI_4.2
FASTA DNA sequence for Xenopus tropicalis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/xenopus_tropicalis/dna/Xenopus_tropicalis.JGI_4.2.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/xenopus_tropicalis/dna/Xenopus_tropicalis.JGI_4.2.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/xenopus_tropicalis/dna/Xenopus_tropicalis.JGI_4.2.69.dna_rm.toplevel.fa.gz
FASTA
Xenopus_tropicalis.JGI_4.2.69.dna_sm.toplevel.fa
Ensembl
Xenopus tropicalis
8364
JGI_4.2
FASTA DNA sequence for Xenopus tropicalis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/xenopus_tropicalis/dna/Xenopus_tropicalis.JGI_4.2.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/xenopus_tropicalis/dna/Xenopus_tropicalis.JGI_4.2.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/xenopus_tropicalis/dna/Xenopus_tropicalis.JGI_4.2.69.dna_sm.toplevel.fa.gz
FASTA
Xenopus_tropicalis.JGI_4.2.69.ncrna.fa
Ensembl
Xenopus tropicalis
8364
JGI_4.2
FASTA ncRNA sequence for Xenopus tropicalis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/xenopus_tropicalis/ncrna/Xenopus_tropicalis.JGI_4.2.69.ncrna.fa.rz, ensembl/release-69/fasta/xenopus_tropicalis/ncrna/Xenopus_tropicalis.JGI_4.2.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/xenopus_tropicalis/ncrna/Xenopus_tropicalis.JGI_4.2.69.ncrna.fa.gz
FASTA
Xenopus_tropicalis.JGI_4.2.69.pep.all.fa
Ensembl
Xenopus tropicalis
8364
JGI_4.2
FASTA pep sequence for Xenopus tropicalis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/xenopus_tropicalis/pep/Xenopus_tropicalis.JGI_4.2.69.pep.all.fa.rz, ensembl/release-69/fasta/xenopus_tropicalis/pep/Xenopus_tropicalis.JGI_4.2.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/xenopus_tropicalis/pep/Xenopus_tropicalis.JGI_4.2.69.pep.all.fa.gz
FASTA
Xiphophorus_maculatus.Xipmac4.4.2.69.cdna.all.fa
Ensembl
Xiphophorus maculatus
8083
Xipmac4.4.2
FASTA cDNA sequence for Xiphophorus maculatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/xiphophorus_maculatus/cdna/Xiphophorus_maculatus.Xipmac4.4.2.69.cdna.all.fa.rz, ensembl/release-69/fasta/xiphophorus_maculatus/cdna/Xiphophorus_maculatus.Xipmac4.4.2.69.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/xiphophorus_maculatus/cdna/Xiphophorus_maculatus.Xipmac4.4.2.69.cdna.all.fa.gz
FASTA
Xiphophorus_maculatus.Xipmac4.4.2.69.dna.toplevel.fa
Ensembl
Xiphophorus maculatus
8083
Xipmac4.4.2
FASTA DNA sequence for Xiphophorus maculatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/xiphophorus_maculatus/dna/Xiphophorus_maculatus.Xipmac4.4.2.69.dna.toplevel.fa.rz, ensembl/release-69/fasta/xiphophorus_maculatus/dna/Xiphophorus_maculatus.Xipmac4.4.2.69.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/xiphophorus_maculatus/dna/Xiphophorus_maculatus.Xipmac4.4.2.69.dna.toplevel.fa.gz
FASTA
Xiphophorus_maculatus.Xipmac4.4.2.69.dna_rm.toplevel.fa
Ensembl
Xiphophorus maculatus
8083
Xipmac4.4.2
FASTA DNA sequence for Xiphophorus maculatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/xiphophorus_maculatus/dna/Xiphophorus_maculatus.Xipmac4.4.2.69.dna_rm.toplevel.fa.rz, ensembl/release-69/fasta/xiphophorus_maculatus/dna/Xiphophorus_maculatus.Xipmac4.4.2.69.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/xiphophorus_maculatus/dna/Xiphophorus_maculatus.Xipmac4.4.2.69.dna_rm.toplevel.fa.gz
FASTA
Xiphophorus_maculatus.Xipmac4.4.2.69.dna_sm.toplevel.fa
Ensembl
Xiphophorus maculatus
8083
Xipmac4.4.2
FASTA DNA sequence for Xiphophorus maculatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/xiphophorus_maculatus/dna/Xiphophorus_maculatus.Xipmac4.4.2.69.dna_sm.toplevel.fa.rz, ensembl/release-69/fasta/xiphophorus_maculatus/dna/Xiphophorus_maculatus.Xipmac4.4.2.69.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/xiphophorus_maculatus/dna/Xiphophorus_maculatus.Xipmac4.4.2.69.dna_sm.toplevel.fa.gz
FASTA
Xiphophorus_maculatus.Xipmac4.4.2.69.ncrna.fa
Ensembl
Xiphophorus maculatus
8083
Xipmac4.4.2
FASTA ncRNA sequence for Xiphophorus maculatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/xiphophorus_maculatus/ncrna/Xiphophorus_maculatus.Xipmac4.4.2.69.ncrna.fa.rz, ensembl/release-69/fasta/xiphophorus_maculatus/ncrna/Xiphophorus_maculatus.Xipmac4.4.2.69.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/xiphophorus_maculatus/ncrna/Xiphophorus_maculatus.Xipmac4.4.2.69.ncrna.fa.gz
FASTA
Xiphophorus_maculatus.Xipmac4.4.2.69.pep.all.fa
Ensembl
Xiphophorus maculatus
8083
Xipmac4.4.2
FASTA pep sequence for Xiphophorus maculatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-69/fasta/xiphophorus_maculatus/pep/Xiphophorus_maculatus.Xipmac4.4.2.69.pep.all.fa.rz, ensembl/release-69/fasta/xiphophorus_maculatus/pep/Xiphophorus_maculatus.Xipmac4.4.2.69.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-69/fasta/xiphophorus_maculatus/pep/Xiphophorus_maculatus.Xipmac4.4.2.69.pep.all.fa.gz
FASTA
Ochotona_princeps.pika.70.dna.toplevel.fa
Ensembl
Ochotona princeps
9978
pika
FASTA DNA sequence for Ochotona princeps
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/ochotona_princeps/dna/Ochotona_princeps.pika.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/ochotona_princeps/dna/Ochotona_princeps.pika.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/ochotona_princeps/dna/Ochotona_princeps.pika.70.dna.toplevel.fa.gz
FASTA
Ochotona_princeps.pika.70.dna_rm.toplevel.fa
Ensembl
Ochotona princeps
9978
pika
FASTA DNA sequence for Ochotona princeps
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/ochotona_princeps/dna/Ochotona_princeps.pika.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/ochotona_princeps/dna/Ochotona_princeps.pika.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/ochotona_princeps/dna/Ochotona_princeps.pika.70.dna_rm.toplevel.fa.gz
FASTA
Ochotona_princeps.pika.70.dna_sm.toplevel.fa
Ensembl
Ochotona princeps
9978
pika
FASTA DNA sequence for Ochotona princeps
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/ochotona_princeps/dna/Ochotona_princeps.pika.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/ochotona_princeps/dna/Ochotona_princeps.pika.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/ochotona_princeps/dna/Ochotona_princeps.pika.70.dna_sm.toplevel.fa.gz
FASTA
Ochotona_princeps.pika.70.ncrna.fa
Ensembl
Ochotona princeps
9978
pika
FASTA ncRNA sequence for Ochotona princeps
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/ochotona_princeps/ncrna/Ochotona_princeps.pika.70.ncrna.fa.rz, ensembl/release-70/fasta/ochotona_princeps/ncrna/Ochotona_princeps.pika.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/ochotona_princeps/ncrna/Ochotona_princeps.pika.70.ncrna.fa.gz
FASTA
Ochotona_princeps.pika.70.pep.all.fa
Ensembl
Ochotona princeps
9978
pika
FASTA pep sequence for Ochotona princeps
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/ochotona_princeps/pep/Ochotona_princeps.pika.70.pep.all.fa.rz, ensembl/release-70/fasta/ochotona_princeps/pep/Ochotona_princeps.pika.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/ochotona_princeps/pep/Ochotona_princeps.pika.70.pep.all.fa.gz
FASTA
Oreochromis_niloticus.Orenil1.0.70.cdna.all.fa
Ensembl
Oreochromis niloticus
8128
Orenil1.0
FASTA cDNA sequence for Oreochromis niloticus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/oreochromis_niloticus/cdna/Oreochromis_niloticus.Orenil1.0.70.cdna.all.fa.rz, ensembl/release-70/fasta/oreochromis_niloticus/cdna/Oreochromis_niloticus.Orenil1.0.70.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/oreochromis_niloticus/cdna/Oreochromis_niloticus.Orenil1.0.70.cdna.all.fa.gz
FASTA
Oreochromis_niloticus.Orenil1.0.70.dna.toplevel.fa
Ensembl
Oreochromis niloticus
8128
Orenil1.0
FASTA DNA sequence for Oreochromis niloticus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/oreochromis_niloticus/dna/Oreochromis_niloticus.Orenil1.0.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/oreochromis_niloticus/dna/Oreochromis_niloticus.Orenil1.0.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/oreochromis_niloticus/dna/Oreochromis_niloticus.Orenil1.0.70.dna.toplevel.fa.gz
FASTA
Oreochromis_niloticus.Orenil1.0.70.dna_rm.toplevel.fa
Ensembl
Oreochromis niloticus
8128
Orenil1.0
FASTA DNA sequence for Oreochromis niloticus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/oreochromis_niloticus/dna/Oreochromis_niloticus.Orenil1.0.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/oreochromis_niloticus/dna/Oreochromis_niloticus.Orenil1.0.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/oreochromis_niloticus/dna/Oreochromis_niloticus.Orenil1.0.70.dna_rm.toplevel.fa.gz
FASTA
Oreochromis_niloticus.Orenil1.0.70.dna_sm.toplevel.fa
Ensembl
Oreochromis niloticus
8128
Orenil1.0
FASTA DNA sequence for Oreochromis niloticus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/oreochromis_niloticus/dna/Oreochromis_niloticus.Orenil1.0.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/oreochromis_niloticus/dna/Oreochromis_niloticus.Orenil1.0.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/oreochromis_niloticus/dna/Oreochromis_niloticus.Orenil1.0.70.dna_sm.toplevel.fa.gz
FASTA
Oreochromis_niloticus.Orenil1.0.70.ncrna.fa
Ensembl
Oreochromis niloticus
8128
Orenil1.0
FASTA ncRNA sequence for Oreochromis niloticus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/oreochromis_niloticus/ncrna/Oreochromis_niloticus.Orenil1.0.70.ncrna.fa.rz, ensembl/release-70/fasta/oreochromis_niloticus/ncrna/Oreochromis_niloticus.Orenil1.0.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/oreochromis_niloticus/ncrna/Oreochromis_niloticus.Orenil1.0.70.ncrna.fa.gz
FASTA
Oreochromis_niloticus.Orenil1.0.70.pep.all.fa
Ensembl
Oreochromis niloticus
8128
Orenil1.0
FASTA pep sequence for Oreochromis niloticus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/oreochromis_niloticus/pep/Oreochromis_niloticus.Orenil1.0.70.pep.all.fa.rz, ensembl/release-70/fasta/oreochromis_niloticus/pep/Oreochromis_niloticus.Orenil1.0.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/oreochromis_niloticus/pep/Oreochromis_niloticus.Orenil1.0.70.pep.all.fa.gz
FASTA
Ornithorhynchus_anatinus.OANA5.70.cdna.all.fa
Ensembl
Ornithorhynchus anatinus
9258
OANA5
FASTA cDNA sequence for Ornithorhynchus anatinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/ornithorhynchus_anatinus/cdna/Ornithorhynchus_anatinus.OANA5.70.cdna.all.fa.rz, ensembl/release-70/fasta/ornithorhynchus_anatinus/cdna/Ornithorhynchus_anatinus.OANA5.70.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/ornithorhynchus_anatinus/cdna/Ornithorhynchus_anatinus.OANA5.70.cdna.all.fa.gz
FASTA
Ornithorhynchus_anatinus.OANA5.70.dna.toplevel.fa
Ensembl
Ornithorhynchus anatinus
9258
OANA5
FASTA DNA sequence for Ornithorhynchus anatinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/ornithorhynchus_anatinus/dna/Ornithorhynchus_anatinus.OANA5.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/ornithorhynchus_anatinus/dna/Ornithorhynchus_anatinus.OANA5.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/ornithorhynchus_anatinus/dna/Ornithorhynchus_anatinus.OANA5.70.dna.toplevel.fa.gz
FASTA
Ornithorhynchus_anatinus.OANA5.70.dna_rm.toplevel.fa
Ensembl
Ornithorhynchus anatinus
9258
OANA5
FASTA DNA sequence for Ornithorhynchus anatinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/ornithorhynchus_anatinus/dna/Ornithorhynchus_anatinus.OANA5.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/ornithorhynchus_anatinus/dna/Ornithorhynchus_anatinus.OANA5.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/ornithorhynchus_anatinus/dna/Ornithorhynchus_anatinus.OANA5.70.dna_rm.toplevel.fa.gz
FASTA
Ornithorhynchus_anatinus.OANA5.70.dna_sm.toplevel.fa
Ensembl
Ornithorhynchus anatinus
9258
OANA5
FASTA DNA sequence for Ornithorhynchus anatinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/ornithorhynchus_anatinus/dna/Ornithorhynchus_anatinus.OANA5.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/ornithorhynchus_anatinus/dna/Ornithorhynchus_anatinus.OANA5.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/ornithorhynchus_anatinus/dna/Ornithorhynchus_anatinus.OANA5.70.dna_sm.toplevel.fa.gz
FASTA
Ornithorhynchus_anatinus.OANA5.70.ncrna.fa
Ensembl
Ornithorhynchus anatinus
9258
OANA5
FASTA ncRNA sequence for Ornithorhynchus anatinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/ornithorhynchus_anatinus/ncrna/Ornithorhynchus_anatinus.OANA5.70.ncrna.fa.rz, ensembl/release-70/fasta/ornithorhynchus_anatinus/ncrna/Ornithorhynchus_anatinus.OANA5.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/ornithorhynchus_anatinus/ncrna/Ornithorhynchus_anatinus.OANA5.70.ncrna.fa.gz
FASTA
Ornithorhynchus_anatinus.OANA5.70.pep.all.fa
Ensembl
Ornithorhynchus anatinus
9258
OANA5
FASTA pep sequence for Ornithorhynchus anatinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/ornithorhynchus_anatinus/pep/Ornithorhynchus_anatinus.OANA5.70.pep.all.fa.rz, ensembl/release-70/fasta/ornithorhynchus_anatinus/pep/Ornithorhynchus_anatinus.OANA5.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/ornithorhynchus_anatinus/pep/Ornithorhynchus_anatinus.OANA5.70.pep.all.fa.gz
FASTA
Oryctolagus_cuniculus.oryCun2.70.cdna.all.fa
Ensembl
Oryctolagus cuniculus
9986
oryCun2
FASTA cDNA sequence for Oryctolagus cuniculus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/oryctolagus_cuniculus/cdna/Oryctolagus_cuniculus.oryCun2.70.cdna.all.fa.rz, ensembl/release-70/fasta/oryctolagus_cuniculus/cdna/Oryctolagus_cuniculus.oryCun2.70.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/oryctolagus_cuniculus/cdna/Oryctolagus_cuniculus.oryCun2.70.cdna.all.fa.gz
FASTA
Oryctolagus_cuniculus.oryCun2.70.dna.toplevel.fa
Ensembl
Oryctolagus cuniculus
9986
oryCun2
FASTA DNA sequence for Oryctolagus cuniculus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/oryctolagus_cuniculus/dna/Oryctolagus_cuniculus.oryCun2.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/oryctolagus_cuniculus/dna/Oryctolagus_cuniculus.oryCun2.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/oryctolagus_cuniculus/dna/Oryctolagus_cuniculus.oryCun2.70.dna.toplevel.fa.gz
FASTA
Oryctolagus_cuniculus.oryCun2.70.dna_rm.toplevel.fa
Ensembl
Oryctolagus cuniculus
9986
oryCun2
FASTA DNA sequence for Oryctolagus cuniculus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/oryctolagus_cuniculus/dna/Oryctolagus_cuniculus.oryCun2.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/oryctolagus_cuniculus/dna/Oryctolagus_cuniculus.oryCun2.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/oryctolagus_cuniculus/dna/Oryctolagus_cuniculus.oryCun2.70.dna_rm.toplevel.fa.gz
FASTA
Oryctolagus_cuniculus.oryCun2.70.dna_sm.toplevel.fa
Ensembl
Oryctolagus cuniculus
9986
oryCun2
FASTA DNA sequence for Oryctolagus cuniculus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/oryctolagus_cuniculus/dna/Oryctolagus_cuniculus.oryCun2.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/oryctolagus_cuniculus/dna/Oryctolagus_cuniculus.oryCun2.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/oryctolagus_cuniculus/dna/Oryctolagus_cuniculus.oryCun2.70.dna_sm.toplevel.fa.gz
FASTA
Oryctolagus_cuniculus.oryCun2.70.ncrna.fa
Ensembl
Oryctolagus cuniculus
9986
oryCun2
FASTA ncRNA sequence for Oryctolagus cuniculus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/oryctolagus_cuniculus/ncrna/Oryctolagus_cuniculus.oryCun2.70.ncrna.fa.rz, ensembl/release-70/fasta/oryctolagus_cuniculus/ncrna/Oryctolagus_cuniculus.oryCun2.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/oryctolagus_cuniculus/ncrna/Oryctolagus_cuniculus.oryCun2.70.ncrna.fa.gz
FASTA
Oryctolagus_cuniculus.oryCun2.70.pep.all.fa
Ensembl
Oryctolagus cuniculus
9986
oryCun2
FASTA pep sequence for Oryctolagus cuniculus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/oryctolagus_cuniculus/pep/Oryctolagus_cuniculus.oryCun2.70.pep.all.fa.rz, ensembl/release-70/fasta/oryctolagus_cuniculus/pep/Oryctolagus_cuniculus.oryCun2.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/oryctolagus_cuniculus/pep/Oryctolagus_cuniculus.oryCun2.70.pep.all.fa.gz
FASTA
Oryzias_latipes.MEDAKA1.70.cdna.all.fa
Ensembl
Oryzias latipes
8090
MEDAKA1
FASTA cDNA sequence for Oryzias latipes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/oryzias_latipes/cdna/Oryzias_latipes.MEDAKA1.70.cdna.all.fa.rz, ensembl/release-70/fasta/oryzias_latipes/cdna/Oryzias_latipes.MEDAKA1.70.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/oryzias_latipes/cdna/Oryzias_latipes.MEDAKA1.70.cdna.all.fa.gz
FASTA
Oryzias_latipes.MEDAKA1.70.dna.toplevel.fa
Ensembl
Oryzias latipes
8090
MEDAKA1
FASTA DNA sequence for Oryzias latipes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/oryzias_latipes/dna/Oryzias_latipes.MEDAKA1.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/oryzias_latipes/dna/Oryzias_latipes.MEDAKA1.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/oryzias_latipes/dna/Oryzias_latipes.MEDAKA1.70.dna.toplevel.fa.gz
FASTA
Oryzias_latipes.MEDAKA1.70.dna_rm.toplevel.fa
Ensembl
Oryzias latipes
8090
MEDAKA1
FASTA DNA sequence for Oryzias latipes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/oryzias_latipes/dna/Oryzias_latipes.MEDAKA1.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/oryzias_latipes/dna/Oryzias_latipes.MEDAKA1.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/oryzias_latipes/dna/Oryzias_latipes.MEDAKA1.70.dna_rm.toplevel.fa.gz
FASTA
Oryzias_latipes.MEDAKA1.70.dna_sm.toplevel.fa
Ensembl
Oryzias latipes
8090
MEDAKA1
FASTA DNA sequence for Oryzias latipes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/oryzias_latipes/dna/Oryzias_latipes.MEDAKA1.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/oryzias_latipes/dna/Oryzias_latipes.MEDAKA1.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/oryzias_latipes/dna/Oryzias_latipes.MEDAKA1.70.dna_sm.toplevel.fa.gz
FASTA
Oryzias_latipes.MEDAKA1.70.ncrna.fa
Ensembl
Oryzias latipes
8090
MEDAKA1
FASTA ncRNA sequence for Oryzias latipes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/oryzias_latipes/ncrna/Oryzias_latipes.MEDAKA1.70.ncrna.fa.rz, ensembl/release-70/fasta/oryzias_latipes/ncrna/Oryzias_latipes.MEDAKA1.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/oryzias_latipes/ncrna/Oryzias_latipes.MEDAKA1.70.ncrna.fa.gz
FASTA
Oryzias_latipes.MEDAKA1.70.pep.all.fa
Ensembl
Oryzias latipes
8090
MEDAKA1
FASTA pep sequence for Oryzias latipes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/oryzias_latipes/pep/Oryzias_latipes.MEDAKA1.70.pep.all.fa.rz, ensembl/release-70/fasta/oryzias_latipes/pep/Oryzias_latipes.MEDAKA1.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/oryzias_latipes/pep/Oryzias_latipes.MEDAKA1.70.pep.all.fa.gz
FASTA
Otolemur_garnettii.OtoGar3.70.cdna.all.fa
Ensembl
Otolemur garnettii
30611
OtoGar3
FASTA cDNA sequence for Otolemur garnettii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/otolemur_garnettii/cdna/Otolemur_garnettii.OtoGar3.70.cdna.all.fa.rz, ensembl/release-70/fasta/otolemur_garnettii/cdna/Otolemur_garnettii.OtoGar3.70.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/otolemur_garnettii/cdna/Otolemur_garnettii.OtoGar3.70.cdna.all.fa.gz
FASTA
Otolemur_garnettii.OtoGar3.70.dna.toplevel.fa
Ensembl
Otolemur garnettii
30611
OtoGar3
FASTA DNA sequence for Otolemur garnettii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/otolemur_garnettii/dna/Otolemur_garnettii.OtoGar3.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/otolemur_garnettii/dna/Otolemur_garnettii.OtoGar3.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/otolemur_garnettii/dna/Otolemur_garnettii.OtoGar3.70.dna.toplevel.fa.gz
FASTA
Otolemur_garnettii.OtoGar3.70.dna_rm.toplevel.fa
Ensembl
Otolemur garnettii
30611
OtoGar3
FASTA DNA sequence for Otolemur garnettii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/otolemur_garnettii/dna/Otolemur_garnettii.OtoGar3.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/otolemur_garnettii/dna/Otolemur_garnettii.OtoGar3.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/otolemur_garnettii/dna/Otolemur_garnettii.OtoGar3.70.dna_rm.toplevel.fa.gz
FASTA
Otolemur_garnettii.OtoGar3.70.dna_sm.toplevel.fa
Ensembl
Otolemur garnettii
30611
OtoGar3
FASTA DNA sequence for Otolemur garnettii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/otolemur_garnettii/dna/Otolemur_garnettii.OtoGar3.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/otolemur_garnettii/dna/Otolemur_garnettii.OtoGar3.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/otolemur_garnettii/dna/Otolemur_garnettii.OtoGar3.70.dna_sm.toplevel.fa.gz
FASTA
Otolemur_garnettii.OtoGar3.70.ncrna.fa
Ensembl
Otolemur garnettii
30611
OtoGar3
FASTA ncRNA sequence for Otolemur garnettii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/otolemur_garnettii/ncrna/Otolemur_garnettii.OtoGar3.70.ncrna.fa.rz, ensembl/release-70/fasta/otolemur_garnettii/ncrna/Otolemur_garnettii.OtoGar3.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/otolemur_garnettii/ncrna/Otolemur_garnettii.OtoGar3.70.ncrna.fa.gz
FASTA
Otolemur_garnettii.OtoGar3.70.pep.all.fa
Ensembl
Otolemur garnettii
30611
OtoGar3
FASTA pep sequence for Otolemur garnettii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/otolemur_garnettii/pep/Otolemur_garnettii.OtoGar3.70.pep.all.fa.rz, ensembl/release-70/fasta/otolemur_garnettii/pep/Otolemur_garnettii.OtoGar3.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/otolemur_garnettii/pep/Otolemur_garnettii.OtoGar3.70.pep.all.fa.gz
FASTA
Pan_troglodytes.CHIMP2.1.4.70.cdna.all.fa
Ensembl
Pan troglodytes
9598
CHIMP2.1.4
FASTA cDNA sequence for Pan troglodytes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/pan_troglodytes/cdna/Pan_troglodytes.CHIMP2.1.4.70.cdna.all.fa.rz, ensembl/release-70/fasta/pan_troglodytes/cdna/Pan_troglodytes.CHIMP2.1.4.70.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/pan_troglodytes/cdna/Pan_troglodytes.CHIMP2.1.4.70.cdna.all.fa.gz
FASTA
Pan_troglodytes.CHIMP2.1.4.70.dna.toplevel.fa
Ensembl
Pan troglodytes
9598
CHIMP2.1.4
FASTA DNA sequence for Pan troglodytes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/pan_troglodytes/dna/Pan_troglodytes.CHIMP2.1.4.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/pan_troglodytes/dna/Pan_troglodytes.CHIMP2.1.4.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/pan_troglodytes/dna/Pan_troglodytes.CHIMP2.1.4.70.dna.toplevel.fa.gz
FASTA
Pan_troglodytes.CHIMP2.1.4.70.dna_rm.toplevel.fa
Ensembl
Pan troglodytes
9598
CHIMP2.1.4
FASTA DNA sequence for Pan troglodytes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/pan_troglodytes/dna/Pan_troglodytes.CHIMP2.1.4.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/pan_troglodytes/dna/Pan_troglodytes.CHIMP2.1.4.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/pan_troglodytes/dna/Pan_troglodytes.CHIMP2.1.4.70.dna_rm.toplevel.fa.gz
FASTA
Pan_troglodytes.CHIMP2.1.4.70.dna_sm.toplevel.fa
Ensembl
Pan troglodytes
9598
CHIMP2.1.4
FASTA DNA sequence for Pan troglodytes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/pan_troglodytes/dna/Pan_troglodytes.CHIMP2.1.4.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/pan_troglodytes/dna/Pan_troglodytes.CHIMP2.1.4.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/pan_troglodytes/dna/Pan_troglodytes.CHIMP2.1.4.70.dna_sm.toplevel.fa.gz
FASTA
Pan_troglodytes.CHIMP2.1.4.70.ncrna.fa
Ensembl
Pan troglodytes
9598
CHIMP2.1.4
FASTA ncRNA sequence for Pan troglodytes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/pan_troglodytes/ncrna/Pan_troglodytes.CHIMP2.1.4.70.ncrna.fa.rz, ensembl/release-70/fasta/pan_troglodytes/ncrna/Pan_troglodytes.CHIMP2.1.4.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/pan_troglodytes/ncrna/Pan_troglodytes.CHIMP2.1.4.70.ncrna.fa.gz
FASTA
Pan_troglodytes.CHIMP2.1.4.70.pep.all.fa
Ensembl
Pan troglodytes
9598
CHIMP2.1.4
FASTA pep sequence for Pan troglodytes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/pan_troglodytes/pep/Pan_troglodytes.CHIMP2.1.4.70.pep.all.fa.rz, ensembl/release-70/fasta/pan_troglodytes/pep/Pan_troglodytes.CHIMP2.1.4.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/pan_troglodytes/pep/Pan_troglodytes.CHIMP2.1.4.70.pep.all.fa.gz
FASTA
Pelodiscus_sinensis.PelSin_1.0.70.cdna.all.fa
Ensembl
Pelodiscus sinensis
13735
PelSin_1.0
FASTA cDNA sequence for Pelodiscus sinensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/pelodiscus_sinensis/cdna/Pelodiscus_sinensis.PelSin_1.0.70.cdna.all.fa.rz, ensembl/release-70/fasta/pelodiscus_sinensis/cdna/Pelodiscus_sinensis.PelSin_1.0.70.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/pelodiscus_sinensis/cdna/Pelodiscus_sinensis.PelSin_1.0.70.cdna.all.fa.gz
FASTA
Pelodiscus_sinensis.PelSin_1.0.70.dna.toplevel.fa
Ensembl
Pelodiscus sinensis
13735
PelSin_1.0
FASTA DNA sequence for Pelodiscus sinensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/pelodiscus_sinensis/dna/Pelodiscus_sinensis.PelSin_1.0.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/pelodiscus_sinensis/dna/Pelodiscus_sinensis.PelSin_1.0.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/pelodiscus_sinensis/dna/Pelodiscus_sinensis.PelSin_1.0.70.dna.toplevel.fa.gz
FASTA
Pelodiscus_sinensis.PelSin_1.0.70.dna_rm.toplevel.fa
Ensembl
Pelodiscus sinensis
13735
PelSin_1.0
FASTA DNA sequence for Pelodiscus sinensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/pelodiscus_sinensis/dna/Pelodiscus_sinensis.PelSin_1.0.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/pelodiscus_sinensis/dna/Pelodiscus_sinensis.PelSin_1.0.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/pelodiscus_sinensis/dna/Pelodiscus_sinensis.PelSin_1.0.70.dna_rm.toplevel.fa.gz
FASTA
Pelodiscus_sinensis.PelSin_1.0.70.dna_sm.toplevel.fa
Ensembl
Pelodiscus sinensis
13735
PelSin_1.0
FASTA DNA sequence for Pelodiscus sinensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/pelodiscus_sinensis/dna/Pelodiscus_sinensis.PelSin_1.0.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/pelodiscus_sinensis/dna/Pelodiscus_sinensis.PelSin_1.0.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/pelodiscus_sinensis/dna/Pelodiscus_sinensis.PelSin_1.0.70.dna_sm.toplevel.fa.gz
FASTA
Pelodiscus_sinensis.PelSin_1.0.70.ncrna.fa
Ensembl
Pelodiscus sinensis
13735
PelSin_1.0
FASTA ncRNA sequence for Pelodiscus sinensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/pelodiscus_sinensis/ncrna/Pelodiscus_sinensis.PelSin_1.0.70.ncrna.fa.rz, ensembl/release-70/fasta/pelodiscus_sinensis/ncrna/Pelodiscus_sinensis.PelSin_1.0.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/pelodiscus_sinensis/ncrna/Pelodiscus_sinensis.PelSin_1.0.70.ncrna.fa.gz
FASTA
Pelodiscus_sinensis.PelSin_1.0.70.pep.all.fa
Ensembl
Pelodiscus sinensis
13735
PelSin_1.0
FASTA pep sequence for Pelodiscus sinensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/pelodiscus_sinensis/pep/Pelodiscus_sinensis.PelSin_1.0.70.pep.all.fa.rz, ensembl/release-70/fasta/pelodiscus_sinensis/pep/Pelodiscus_sinensis.PelSin_1.0.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/pelodiscus_sinensis/pep/Pelodiscus_sinensis.PelSin_1.0.70.pep.all.fa.gz
FASTA
Petromyzon_marinus.Pmarinus_7.0.70.cdna.all.fa
Ensembl
Petromyzon marinus
7757
Pmarinus_7.0
FASTA cDNA sequence for Petromyzon marinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/petromyzon_marinus/cdna/Petromyzon_marinus.Pmarinus_7.0.70.cdna.all.fa.rz, ensembl/release-70/fasta/petromyzon_marinus/cdna/Petromyzon_marinus.Pmarinus_7.0.70.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/petromyzon_marinus/cdna/Petromyzon_marinus.Pmarinus_7.0.70.cdna.all.fa.gz
FASTA
Petromyzon_marinus.Pmarinus_7.0.70.dna.toplevel.fa
Ensembl
Petromyzon marinus
7757
Pmarinus_7.0
FASTA DNA sequence for Petromyzon marinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/petromyzon_marinus/dna/Petromyzon_marinus.Pmarinus_7.0.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/petromyzon_marinus/dna/Petromyzon_marinus.Pmarinus_7.0.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/petromyzon_marinus/dna/Petromyzon_marinus.Pmarinus_7.0.70.dna.toplevel.fa.gz
FASTA
Petromyzon_marinus.Pmarinus_7.0.70.dna_rm.toplevel.fa
Ensembl
Petromyzon marinus
7757
Pmarinus_7.0
FASTA DNA sequence for Petromyzon marinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/petromyzon_marinus/dna/Petromyzon_marinus.Pmarinus_7.0.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/petromyzon_marinus/dna/Petromyzon_marinus.Pmarinus_7.0.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/petromyzon_marinus/dna/Petromyzon_marinus.Pmarinus_7.0.70.dna_rm.toplevel.fa.gz
FASTA
Petromyzon_marinus.Pmarinus_7.0.70.dna_sm.toplevel.fa
Ensembl
Petromyzon marinus
7757
Pmarinus_7.0
FASTA DNA sequence for Petromyzon marinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/petromyzon_marinus/dna/Petromyzon_marinus.Pmarinus_7.0.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/petromyzon_marinus/dna/Petromyzon_marinus.Pmarinus_7.0.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/petromyzon_marinus/dna/Petromyzon_marinus.Pmarinus_7.0.70.dna_sm.toplevel.fa.gz
FASTA
Petromyzon_marinus.Pmarinus_7.0.70.ncrna.fa
Ensembl
Petromyzon marinus
7757
Pmarinus_7.0
FASTA ncRNA sequence for Petromyzon marinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/petromyzon_marinus/ncrna/Petromyzon_marinus.Pmarinus_7.0.70.ncrna.fa.rz, ensembl/release-70/fasta/petromyzon_marinus/ncrna/Petromyzon_marinus.Pmarinus_7.0.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/petromyzon_marinus/ncrna/Petromyzon_marinus.Pmarinus_7.0.70.ncrna.fa.gz
FASTA
Petromyzon_marinus.Pmarinus_7.0.70.pep.all.fa
Ensembl
Petromyzon marinus
7757
Pmarinus_7.0
FASTA pep sequence for Petromyzon marinus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/petromyzon_marinus/pep/Petromyzon_marinus.Pmarinus_7.0.70.pep.all.fa.rz, ensembl/release-70/fasta/petromyzon_marinus/pep/Petromyzon_marinus.Pmarinus_7.0.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/petromyzon_marinus/pep/Petromyzon_marinus.Pmarinus_7.0.70.pep.all.fa.gz
FASTA
Pongo_abelii.PPYG2.70.cdna.all.fa
Ensembl
Pongo abelii
9601
PPYG2
FASTA cDNA sequence for Pongo abelii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/pongo_abelii/cdna/Pongo_abelii.PPYG2.70.cdna.all.fa.rz, ensembl/release-70/fasta/pongo_abelii/cdna/Pongo_abelii.PPYG2.70.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/pongo_abelii/cdna/Pongo_abelii.PPYG2.70.cdna.all.fa.gz
FASTA
Pongo_abelii.PPYG2.70.dna.toplevel.fa
Ensembl
Pongo abelii
9601
PPYG2
FASTA DNA sequence for Pongo abelii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/pongo_abelii/dna/Pongo_abelii.PPYG2.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/pongo_abelii/dna/Pongo_abelii.PPYG2.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/pongo_abelii/dna/Pongo_abelii.PPYG2.70.dna.toplevel.fa.gz
FASTA
Pongo_abelii.PPYG2.70.dna_rm.toplevel.fa
Ensembl
Pongo abelii
9601
PPYG2
FASTA DNA sequence for Pongo abelii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/pongo_abelii/dna/Pongo_abelii.PPYG2.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/pongo_abelii/dna/Pongo_abelii.PPYG2.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/pongo_abelii/dna/Pongo_abelii.PPYG2.70.dna_rm.toplevel.fa.gz
FASTA
Pongo_abelii.PPYG2.70.dna_sm.toplevel.fa
Ensembl
Pongo abelii
9601
PPYG2
FASTA DNA sequence for Pongo abelii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/pongo_abelii/dna/Pongo_abelii.PPYG2.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/pongo_abelii/dna/Pongo_abelii.PPYG2.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/pongo_abelii/dna/Pongo_abelii.PPYG2.70.dna_sm.toplevel.fa.gz
FASTA
Pongo_abelii.PPYG2.70.ncrna.fa
Ensembl
Pongo abelii
9601
PPYG2
FASTA ncRNA sequence for Pongo abelii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/pongo_abelii/ncrna/Pongo_abelii.PPYG2.70.ncrna.fa.rz, ensembl/release-70/fasta/pongo_abelii/ncrna/Pongo_abelii.PPYG2.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/pongo_abelii/ncrna/Pongo_abelii.PPYG2.70.ncrna.fa.gz
FASTA
Pongo_abelii.PPYG2.70.pep.all.fa
Ensembl
Pongo abelii
9601
PPYG2
FASTA pep sequence for Pongo abelii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/pongo_abelii/pep/Pongo_abelii.PPYG2.70.pep.all.fa.rz, ensembl/release-70/fasta/pongo_abelii/pep/Pongo_abelii.PPYG2.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/pongo_abelii/pep/Pongo_abelii.PPYG2.70.pep.all.fa.gz
FASTA
Procavia_capensis.proCap1.70.cdna.all.fa
Ensembl
Procavia capensis
9813
proCap1
FASTA cDNA sequence for Procavia capensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/procavia_capensis/cdna/Procavia_capensis.proCap1.70.cdna.all.fa.rz, ensembl/release-70/fasta/procavia_capensis/cdna/Procavia_capensis.proCap1.70.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/procavia_capensis/cdna/Procavia_capensis.proCap1.70.cdna.all.fa.gz
FASTA
Procavia_capensis.proCap1.70.dna.toplevel.fa
Ensembl
Procavia capensis
9813
proCap1
FASTA DNA sequence for Procavia capensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/procavia_capensis/dna/Procavia_capensis.proCap1.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/procavia_capensis/dna/Procavia_capensis.proCap1.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/procavia_capensis/dna/Procavia_capensis.proCap1.70.dna.toplevel.fa.gz
FASTA
Procavia_capensis.proCap1.70.dna_rm.toplevel.fa
Ensembl
Procavia capensis
9813
proCap1
FASTA DNA sequence for Procavia capensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/procavia_capensis/dna/Procavia_capensis.proCap1.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/procavia_capensis/dna/Procavia_capensis.proCap1.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/procavia_capensis/dna/Procavia_capensis.proCap1.70.dna_rm.toplevel.fa.gz
FASTA
Procavia_capensis.proCap1.70.dna_sm.toplevel.fa
Ensembl
Procavia capensis
9813
proCap1
FASTA DNA sequence for Procavia capensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/procavia_capensis/dna/Procavia_capensis.proCap1.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/procavia_capensis/dna/Procavia_capensis.proCap1.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/procavia_capensis/dna/Procavia_capensis.proCap1.70.dna_sm.toplevel.fa.gz
FASTA
Procavia_capensis.proCap1.70.ncrna.fa
Ensembl
Procavia capensis
9813
proCap1
FASTA ncRNA sequence for Procavia capensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/procavia_capensis/ncrna/Procavia_capensis.proCap1.70.ncrna.fa.rz, ensembl/release-70/fasta/procavia_capensis/ncrna/Procavia_capensis.proCap1.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/procavia_capensis/ncrna/Procavia_capensis.proCap1.70.ncrna.fa.gz
FASTA
Procavia_capensis.proCap1.70.pep.all.fa
Ensembl
Procavia capensis
9813
proCap1
FASTA pep sequence for Procavia capensis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/procavia_capensis/pep/Procavia_capensis.proCap1.70.pep.all.fa.rz, ensembl/release-70/fasta/procavia_capensis/pep/Procavia_capensis.proCap1.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/procavia_capensis/pep/Procavia_capensis.proCap1.70.pep.all.fa.gz
FASTA
Pteropus_vampyrus.pteVam1.70.cdna.all.fa
Ensembl
Pteropus vampyrus
132908
pteVam1
FASTA cDNA sequence for Pteropus vampyrus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/pteropus_vampyrus/cdna/Pteropus_vampyrus.pteVam1.70.cdna.all.fa.rz, ensembl/release-70/fasta/pteropus_vampyrus/cdna/Pteropus_vampyrus.pteVam1.70.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/pteropus_vampyrus/cdna/Pteropus_vampyrus.pteVam1.70.cdna.all.fa.gz
FASTA
Pteropus_vampyrus.pteVam1.70.dna.toplevel.fa
Ensembl
Pteropus vampyrus
132908
pteVam1
FASTA DNA sequence for Pteropus vampyrus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/pteropus_vampyrus/dna/Pteropus_vampyrus.pteVam1.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/pteropus_vampyrus/dna/Pteropus_vampyrus.pteVam1.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/pteropus_vampyrus/dna/Pteropus_vampyrus.pteVam1.70.dna.toplevel.fa.gz
FASTA
Pteropus_vampyrus.pteVam1.70.dna_rm.toplevel.fa
Ensembl
Pteropus vampyrus
132908
pteVam1
FASTA DNA sequence for Pteropus vampyrus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/pteropus_vampyrus/dna/Pteropus_vampyrus.pteVam1.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/pteropus_vampyrus/dna/Pteropus_vampyrus.pteVam1.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/pteropus_vampyrus/dna/Pteropus_vampyrus.pteVam1.70.dna_rm.toplevel.fa.gz
FASTA
Pteropus_vampyrus.pteVam1.70.dna_sm.toplevel.fa
Ensembl
Pteropus vampyrus
132908
pteVam1
FASTA DNA sequence for Pteropus vampyrus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/pteropus_vampyrus/dna/Pteropus_vampyrus.pteVam1.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/pteropus_vampyrus/dna/Pteropus_vampyrus.pteVam1.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/pteropus_vampyrus/dna/Pteropus_vampyrus.pteVam1.70.dna_sm.toplevel.fa.gz
FASTA
Pteropus_vampyrus.pteVam1.70.ncrna.fa
Ensembl
Pteropus vampyrus
132908
pteVam1
FASTA ncRNA sequence for Pteropus vampyrus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/pteropus_vampyrus/ncrna/Pteropus_vampyrus.pteVam1.70.ncrna.fa.rz, ensembl/release-70/fasta/pteropus_vampyrus/ncrna/Pteropus_vampyrus.pteVam1.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/pteropus_vampyrus/ncrna/Pteropus_vampyrus.pteVam1.70.ncrna.fa.gz
FASTA
Pteropus_vampyrus.pteVam1.70.pep.all.fa
Ensembl
Pteropus vampyrus
132908
pteVam1
FASTA pep sequence for Pteropus vampyrus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/pteropus_vampyrus/pep/Pteropus_vampyrus.pteVam1.70.pep.all.fa.rz, ensembl/release-70/fasta/pteropus_vampyrus/pep/Pteropus_vampyrus.pteVam1.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/pteropus_vampyrus/pep/Pteropus_vampyrus.pteVam1.70.pep.all.fa.gz
FASTA
Rattus_norvegicus.Rnor_5.0.70.cdna.all.fa
Ensembl
Rattus norvegicus
10116
Rnor_5.0
FASTA cDNA sequence for Rattus norvegicus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/rattus_norvegicus/cdna/Rattus_norvegicus.Rnor_5.0.70.cdna.all.fa.rz, ensembl/release-70/fasta/rattus_norvegicus/cdna/Rattus_norvegicus.Rnor_5.0.70.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/rattus_norvegicus/cdna/Rattus_norvegicus.Rnor_5.0.70.cdna.all.fa.gz
FASTA
Rattus_norvegicus.Rnor_5.0.70.dna.toplevel.fa
Ensembl
Rattus norvegicus
10116
Rnor_5.0
FASTA DNA sequence for Rattus norvegicus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/rattus_norvegicus/dna/Rattus_norvegicus.Rnor_5.0.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/rattus_norvegicus/dna/Rattus_norvegicus.Rnor_5.0.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/rattus_norvegicus/dna/Rattus_norvegicus.Rnor_5.0.70.dna.toplevel.fa.gz
FASTA
Rattus_norvegicus.Rnor_5.0.70.dna_rm.toplevel.fa
Ensembl
Rattus norvegicus
10116
Rnor_5.0
FASTA DNA sequence for Rattus norvegicus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/rattus_norvegicus/dna/Rattus_norvegicus.Rnor_5.0.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/rattus_norvegicus/dna/Rattus_norvegicus.Rnor_5.0.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/rattus_norvegicus/dna/Rattus_norvegicus.Rnor_5.0.70.dna_rm.toplevel.fa.gz
FASTA
Rattus_norvegicus.Rnor_5.0.70.dna_sm.toplevel.fa
Ensembl
Rattus norvegicus
10116
Rnor_5.0
FASTA DNA sequence for Rattus norvegicus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/rattus_norvegicus/dna/Rattus_norvegicus.Rnor_5.0.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/rattus_norvegicus/dna/Rattus_norvegicus.Rnor_5.0.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/rattus_norvegicus/dna/Rattus_norvegicus.Rnor_5.0.70.dna_sm.toplevel.fa.gz
FASTA
Rattus_norvegicus.Rnor_5.0.70.ncrna.fa
Ensembl
Rattus norvegicus
10116
Rnor_5.0
FASTA ncRNA sequence for Rattus norvegicus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/rattus_norvegicus/ncrna/Rattus_norvegicus.Rnor_5.0.70.ncrna.fa.rz, ensembl/release-70/fasta/rattus_norvegicus/ncrna/Rattus_norvegicus.Rnor_5.0.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/rattus_norvegicus/ncrna/Rattus_norvegicus.Rnor_5.0.70.ncrna.fa.gz
FASTA
Rattus_norvegicus.Rnor_5.0.70.pep.all.fa
Ensembl
Rattus norvegicus
10116
Rnor_5.0
FASTA pep sequence for Rattus norvegicus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/rattus_norvegicus/pep/Rattus_norvegicus.Rnor_5.0.70.pep.all.fa.rz, ensembl/release-70/fasta/rattus_norvegicus/pep/Rattus_norvegicus.Rnor_5.0.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/rattus_norvegicus/pep/Rattus_norvegicus.Rnor_5.0.70.pep.all.fa.gz
FASTA
Saccharomyces_cerevisiae.EF4.70.cdna.all.fa
Ensembl
Saccharomyces cerevisiae
4932
EF4
FASTA cDNA sequence for Saccharomyces cerevisiae
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/saccharomyces_cerevisiae/cdna/Saccharomyces_cerevisiae.EF4.70.cdna.all.fa.rz, ensembl/release-70/fasta/saccharomyces_cerevisiae/cdna/Saccharomyces_cerevisiae.EF4.70.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/saccharomyces_cerevisiae/cdna/Saccharomyces_cerevisiae.EF4.70.cdna.all.fa.gz
FASTA
Saccharomyces_cerevisiae.EF4.70.dna.toplevel.fa
Ensembl
Saccharomyces cerevisiae
4932
EF4
FASTA DNA sequence for Saccharomyces cerevisiae
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/saccharomyces_cerevisiae/dna/Saccharomyces_cerevisiae.EF4.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/saccharomyces_cerevisiae/dna/Saccharomyces_cerevisiae.EF4.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/saccharomyces_cerevisiae/dna/Saccharomyces_cerevisiae.EF4.70.dna.toplevel.fa.gz
FASTA
Saccharomyces_cerevisiae.EF4.70.dna_rm.toplevel.fa
Ensembl
Saccharomyces cerevisiae
4932
EF4
FASTA DNA sequence for Saccharomyces cerevisiae
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/saccharomyces_cerevisiae/dna/Saccharomyces_cerevisiae.EF4.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/saccharomyces_cerevisiae/dna/Saccharomyces_cerevisiae.EF4.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/saccharomyces_cerevisiae/dna/Saccharomyces_cerevisiae.EF4.70.dna_rm.toplevel.fa.gz
FASTA
Saccharomyces_cerevisiae.EF4.70.dna_sm.toplevel.fa
Ensembl
Saccharomyces cerevisiae
4932
EF4
FASTA DNA sequence for Saccharomyces cerevisiae
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/saccharomyces_cerevisiae/dna/Saccharomyces_cerevisiae.EF4.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/saccharomyces_cerevisiae/dna/Saccharomyces_cerevisiae.EF4.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/saccharomyces_cerevisiae/dna/Saccharomyces_cerevisiae.EF4.70.dna_sm.toplevel.fa.gz
FASTA
Saccharomyces_cerevisiae.EF4.70.ncrna.fa
Ensembl
Saccharomyces cerevisiae
4932
EF4
FASTA ncRNA sequence for Saccharomyces cerevisiae
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/saccharomyces_cerevisiae/ncrna/Saccharomyces_cerevisiae.EF4.70.ncrna.fa.rz, ensembl/release-70/fasta/saccharomyces_cerevisiae/ncrna/Saccharomyces_cerevisiae.EF4.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/saccharomyces_cerevisiae/ncrna/Saccharomyces_cerevisiae.EF4.70.ncrna.fa.gz
FASTA
Saccharomyces_cerevisiae.EF4.70.pep.all.fa
Ensembl
Saccharomyces cerevisiae
4932
EF4
FASTA pep sequence for Saccharomyces cerevisiae
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/saccharomyces_cerevisiae/pep/Saccharomyces_cerevisiae.EF4.70.pep.all.fa.rz, ensembl/release-70/fasta/saccharomyces_cerevisiae/pep/Saccharomyces_cerevisiae.EF4.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/saccharomyces_cerevisiae/pep/Saccharomyces_cerevisiae.EF4.70.pep.all.fa.gz
FASTA
Sarcophilus_harrisii.DEVIL7.0.70.cdna.all.fa
Ensembl
Sarcophilus harrisii
9305
DEVIL7.0
FASTA cDNA sequence for Sarcophilus harrisii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/sarcophilus_harrisii/cdna/Sarcophilus_harrisii.DEVIL7.0.70.cdna.all.fa.rz, ensembl/release-70/fasta/sarcophilus_harrisii/cdna/Sarcophilus_harrisii.DEVIL7.0.70.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/sarcophilus_harrisii/cdna/Sarcophilus_harrisii.DEVIL7.0.70.cdna.all.fa.gz
FASTA
Sarcophilus_harrisii.DEVIL7.0.70.dna.toplevel.fa
Ensembl
Sarcophilus harrisii
9305
DEVIL7.0
FASTA DNA sequence for Sarcophilus harrisii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/sarcophilus_harrisii/dna/Sarcophilus_harrisii.DEVIL7.0.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/sarcophilus_harrisii/dna/Sarcophilus_harrisii.DEVIL7.0.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/sarcophilus_harrisii/dna/Sarcophilus_harrisii.DEVIL7.0.70.dna.toplevel.fa.gz
FASTA
Sarcophilus_harrisii.DEVIL7.0.70.dna_rm.toplevel.fa
Ensembl
Sarcophilus harrisii
9305
DEVIL7.0
FASTA DNA sequence for Sarcophilus harrisii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/sarcophilus_harrisii/dna/Sarcophilus_harrisii.DEVIL7.0.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/sarcophilus_harrisii/dna/Sarcophilus_harrisii.DEVIL7.0.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/sarcophilus_harrisii/dna/Sarcophilus_harrisii.DEVIL7.0.70.dna_rm.toplevel.fa.gz
FASTA
Sarcophilus_harrisii.DEVIL7.0.70.dna_sm.toplevel.fa
Ensembl
Sarcophilus harrisii
9305
DEVIL7.0
FASTA DNA sequence for Sarcophilus harrisii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/sarcophilus_harrisii/dna/Sarcophilus_harrisii.DEVIL7.0.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/sarcophilus_harrisii/dna/Sarcophilus_harrisii.DEVIL7.0.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/sarcophilus_harrisii/dna/Sarcophilus_harrisii.DEVIL7.0.70.dna_sm.toplevel.fa.gz
FASTA
Sarcophilus_harrisii.DEVIL7.0.70.ncrna.fa
Ensembl
Sarcophilus harrisii
9305
DEVIL7.0
FASTA ncRNA sequence for Sarcophilus harrisii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/sarcophilus_harrisii/ncrna/Sarcophilus_harrisii.DEVIL7.0.70.ncrna.fa.rz, ensembl/release-70/fasta/sarcophilus_harrisii/ncrna/Sarcophilus_harrisii.DEVIL7.0.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/sarcophilus_harrisii/ncrna/Sarcophilus_harrisii.DEVIL7.0.70.ncrna.fa.gz
FASTA
Sarcophilus_harrisii.DEVIL7.0.70.pep.all.fa
Ensembl
Sarcophilus harrisii
9305
DEVIL7.0
FASTA pep sequence for Sarcophilus harrisii
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/sarcophilus_harrisii/pep/Sarcophilus_harrisii.DEVIL7.0.70.pep.all.fa.rz, ensembl/release-70/fasta/sarcophilus_harrisii/pep/Sarcophilus_harrisii.DEVIL7.0.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/sarcophilus_harrisii/pep/Sarcophilus_harrisii.DEVIL7.0.70.pep.all.fa.gz
FASTA
Sorex_araneus.COMMON_SHREW1.70.cdna.all.fa
Ensembl
Sorex araneus
42254
COMMON_SHREW1
FASTA cDNA sequence for Sorex araneus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/sorex_araneus/cdna/Sorex_araneus.COMMON_SHREW1.70.cdna.all.fa.rz, ensembl/release-70/fasta/sorex_araneus/cdna/Sorex_araneus.COMMON_SHREW1.70.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/sorex_araneus/cdna/Sorex_araneus.COMMON_SHREW1.70.cdna.all.fa.gz
FASTA
Sorex_araneus.COMMON_SHREW1.70.dna.toplevel.fa
Ensembl
Sorex araneus
42254
COMMON_SHREW1
FASTA DNA sequence for Sorex araneus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/sorex_araneus/dna/Sorex_araneus.COMMON_SHREW1.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/sorex_araneus/dna/Sorex_araneus.COMMON_SHREW1.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/sorex_araneus/dna/Sorex_araneus.COMMON_SHREW1.70.dna.toplevel.fa.gz
FASTA
Sorex_araneus.COMMON_SHREW1.70.dna_rm.toplevel.fa
Ensembl
Sorex araneus
42254
COMMON_SHREW1
FASTA DNA sequence for Sorex araneus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/sorex_araneus/dna/Sorex_araneus.COMMON_SHREW1.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/sorex_araneus/dna/Sorex_araneus.COMMON_SHREW1.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/sorex_araneus/dna/Sorex_araneus.COMMON_SHREW1.70.dna_rm.toplevel.fa.gz
FASTA
Sorex_araneus.COMMON_SHREW1.70.dna_sm.toplevel.fa
Ensembl
Sorex araneus
42254
COMMON_SHREW1
FASTA DNA sequence for Sorex araneus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/sorex_araneus/dna/Sorex_araneus.COMMON_SHREW1.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/sorex_araneus/dna/Sorex_araneus.COMMON_SHREW1.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/sorex_araneus/dna/Sorex_araneus.COMMON_SHREW1.70.dna_sm.toplevel.fa.gz
FASTA
Sorex_araneus.COMMON_SHREW1.70.ncrna.fa
Ensembl
Sorex araneus
42254
COMMON_SHREW1
FASTA ncRNA sequence for Sorex araneus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/sorex_araneus/ncrna/Sorex_araneus.COMMON_SHREW1.70.ncrna.fa.rz, ensembl/release-70/fasta/sorex_araneus/ncrna/Sorex_araneus.COMMON_SHREW1.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/sorex_araneus/ncrna/Sorex_araneus.COMMON_SHREW1.70.ncrna.fa.gz
FASTA
Sorex_araneus.COMMON_SHREW1.70.pep.all.fa
Ensembl
Sorex araneus
42254
COMMON_SHREW1
FASTA pep sequence for Sorex araneus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/sorex_araneus/pep/Sorex_araneus.COMMON_SHREW1.70.pep.all.fa.rz, ensembl/release-70/fasta/sorex_araneus/pep/Sorex_araneus.COMMON_SHREW1.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/sorex_araneus/pep/Sorex_araneus.COMMON_SHREW1.70.pep.all.fa.gz
FASTA
Sus_scrofa.Sscrofa10.2.70.cdna.all.fa
Ensembl
Sus scrofa
9823
Sscrofa10.2
FASTA cDNA sequence for Sus scrofa
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/sus_scrofa/cdna/Sus_scrofa.Sscrofa10.2.70.cdna.all.fa.rz, ensembl/release-70/fasta/sus_scrofa/cdna/Sus_scrofa.Sscrofa10.2.70.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/sus_scrofa/cdna/Sus_scrofa.Sscrofa10.2.70.cdna.all.fa.gz
FASTA
Sus_scrofa.Sscrofa10.2.70.dna.toplevel.fa
Ensembl
Sus scrofa
9823
Sscrofa10.2
FASTA DNA sequence for Sus scrofa
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/sus_scrofa/dna/Sus_scrofa.Sscrofa10.2.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/sus_scrofa/dna/Sus_scrofa.Sscrofa10.2.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/sus_scrofa/dna/Sus_scrofa.Sscrofa10.2.70.dna.toplevel.fa.gz
FASTA
Sus_scrofa.Sscrofa10.2.70.dna_rm.toplevel.fa
Ensembl
Sus scrofa
9823
Sscrofa10.2
FASTA DNA sequence for Sus scrofa
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/sus_scrofa/dna/Sus_scrofa.Sscrofa10.2.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/sus_scrofa/dna/Sus_scrofa.Sscrofa10.2.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/sus_scrofa/dna/Sus_scrofa.Sscrofa10.2.70.dna_rm.toplevel.fa.gz
FASTA
Sus_scrofa.Sscrofa10.2.70.dna_sm.toplevel.fa
Ensembl
Sus scrofa
9823
Sscrofa10.2
FASTA DNA sequence for Sus scrofa
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/sus_scrofa/dna/Sus_scrofa.Sscrofa10.2.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/sus_scrofa/dna/Sus_scrofa.Sscrofa10.2.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/sus_scrofa/dna/Sus_scrofa.Sscrofa10.2.70.dna_sm.toplevel.fa.gz
FASTA
Sus_scrofa.Sscrofa10.2.70.ncrna.fa
Ensembl
Sus scrofa
9823
Sscrofa10.2
FASTA ncRNA sequence for Sus scrofa
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/sus_scrofa/ncrna/Sus_scrofa.Sscrofa10.2.70.ncrna.fa.rz, ensembl/release-70/fasta/sus_scrofa/ncrna/Sus_scrofa.Sscrofa10.2.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/sus_scrofa/ncrna/Sus_scrofa.Sscrofa10.2.70.ncrna.fa.gz
FASTA
Sus_scrofa.Sscrofa10.2.70.pep.all.fa
Ensembl
Sus scrofa
9823
Sscrofa10.2
FASTA pep sequence for Sus scrofa
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/sus_scrofa/pep/Sus_scrofa.Sscrofa10.2.70.pep.all.fa.rz, ensembl/release-70/fasta/sus_scrofa/pep/Sus_scrofa.Sscrofa10.2.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/sus_scrofa/pep/Sus_scrofa.Sscrofa10.2.70.pep.all.fa.gz
FASTA
Taeniopygia_guttata.taeGut3.2.4.70.cdna.all.fa
Ensembl
Taeniopygia guttata
59729
taeGut3.2.4
FASTA cDNA sequence for Taeniopygia guttata
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/taeniopygia_guttata/cdna/Taeniopygia_guttata.taeGut3.2.4.70.cdna.all.fa.rz, ensembl/release-70/fasta/taeniopygia_guttata/cdna/Taeniopygia_guttata.taeGut3.2.4.70.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/taeniopygia_guttata/cdna/Taeniopygia_guttata.taeGut3.2.4.70.cdna.all.fa.gz
FASTA
Taeniopygia_guttata.taeGut3.2.4.70.dna.toplevel.fa
Ensembl
Taeniopygia guttata
59729
taeGut3.2.4
FASTA DNA sequence for Taeniopygia guttata
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/taeniopygia_guttata/dna/Taeniopygia_guttata.taeGut3.2.4.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/taeniopygia_guttata/dna/Taeniopygia_guttata.taeGut3.2.4.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/taeniopygia_guttata/dna/Taeniopygia_guttata.taeGut3.2.4.70.dna.toplevel.fa.gz
FASTA
Taeniopygia_guttata.taeGut3.2.4.70.dna_rm.toplevel.fa
Ensembl
Taeniopygia guttata
59729
taeGut3.2.4
FASTA DNA sequence for Taeniopygia guttata
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/taeniopygia_guttata/dna/Taeniopygia_guttata.taeGut3.2.4.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/taeniopygia_guttata/dna/Taeniopygia_guttata.taeGut3.2.4.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/taeniopygia_guttata/dna/Taeniopygia_guttata.taeGut3.2.4.70.dna_rm.toplevel.fa.gz
FASTA
Taeniopygia_guttata.taeGut3.2.4.70.dna_sm.toplevel.fa
Ensembl
Taeniopygia guttata
59729
taeGut3.2.4
FASTA DNA sequence for Taeniopygia guttata
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/taeniopygia_guttata/dna/Taeniopygia_guttata.taeGut3.2.4.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/taeniopygia_guttata/dna/Taeniopygia_guttata.taeGut3.2.4.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/taeniopygia_guttata/dna/Taeniopygia_guttata.taeGut3.2.4.70.dna_sm.toplevel.fa.gz
FASTA
Taeniopygia_guttata.taeGut3.2.4.70.ncrna.fa
Ensembl
Taeniopygia guttata
59729
taeGut3.2.4
FASTA ncRNA sequence for Taeniopygia guttata
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/taeniopygia_guttata/ncrna/Taeniopygia_guttata.taeGut3.2.4.70.ncrna.fa.rz, ensembl/release-70/fasta/taeniopygia_guttata/ncrna/Taeniopygia_guttata.taeGut3.2.4.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/taeniopygia_guttata/ncrna/Taeniopygia_guttata.taeGut3.2.4.70.ncrna.fa.gz
FASTA
Taeniopygia_guttata.taeGut3.2.4.70.pep.all.fa
Ensembl
Taeniopygia guttata
59729
taeGut3.2.4
FASTA pep sequence for Taeniopygia guttata
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/taeniopygia_guttata/pep/Taeniopygia_guttata.taeGut3.2.4.70.pep.all.fa.rz, ensembl/release-70/fasta/taeniopygia_guttata/pep/Taeniopygia_guttata.taeGut3.2.4.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/taeniopygia_guttata/pep/Taeniopygia_guttata.taeGut3.2.4.70.pep.all.fa.gz
FASTA
Takifugu_rubripes.FUGU4.70.cdna.all.fa
Ensembl
Takifugu rubripes
31033
FUGU4
FASTA cDNA sequence for Takifugu rubripes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/takifugu_rubripes/cdna/Takifugu_rubripes.FUGU4.70.cdna.all.fa.rz, ensembl/release-70/fasta/takifugu_rubripes/cdna/Takifugu_rubripes.FUGU4.70.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/takifugu_rubripes/cdna/Takifugu_rubripes.FUGU4.70.cdna.all.fa.gz
FASTA
Takifugu_rubripes.FUGU4.70.dna.toplevel.fa
Ensembl
Takifugu rubripes
31033
FUGU4
FASTA DNA sequence for Takifugu rubripes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/takifugu_rubripes/dna/Takifugu_rubripes.FUGU4.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/takifugu_rubripes/dna/Takifugu_rubripes.FUGU4.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/takifugu_rubripes/dna/Takifugu_rubripes.FUGU4.70.dna.toplevel.fa.gz
FASTA
Takifugu_rubripes.FUGU4.70.dna_rm.toplevel.fa
Ensembl
Takifugu rubripes
31033
FUGU4
FASTA DNA sequence for Takifugu rubripes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/takifugu_rubripes/dna/Takifugu_rubripes.FUGU4.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/takifugu_rubripes/dna/Takifugu_rubripes.FUGU4.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/takifugu_rubripes/dna/Takifugu_rubripes.FUGU4.70.dna_rm.toplevel.fa.gz
FASTA
Takifugu_rubripes.FUGU4.70.dna_sm.toplevel.fa
Ensembl
Takifugu rubripes
31033
FUGU4
FASTA DNA sequence for Takifugu rubripes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/takifugu_rubripes/dna/Takifugu_rubripes.FUGU4.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/takifugu_rubripes/dna/Takifugu_rubripes.FUGU4.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/takifugu_rubripes/dna/Takifugu_rubripes.FUGU4.70.dna_sm.toplevel.fa.gz
FASTA
Takifugu_rubripes.FUGU4.70.ncrna.fa
Ensembl
Takifugu rubripes
31033
FUGU4
FASTA ncRNA sequence for Takifugu rubripes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/takifugu_rubripes/ncrna/Takifugu_rubripes.FUGU4.70.ncrna.fa.rz, ensembl/release-70/fasta/takifugu_rubripes/ncrna/Takifugu_rubripes.FUGU4.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/takifugu_rubripes/ncrna/Takifugu_rubripes.FUGU4.70.ncrna.fa.gz
FASTA
Takifugu_rubripes.FUGU4.70.pep.all.fa
Ensembl
Takifugu rubripes
31033
FUGU4
FASTA pep sequence for Takifugu rubripes
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/takifugu_rubripes/pep/Takifugu_rubripes.FUGU4.70.pep.all.fa.rz, ensembl/release-70/fasta/takifugu_rubripes/pep/Takifugu_rubripes.FUGU4.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/takifugu_rubripes/pep/Takifugu_rubripes.FUGU4.70.pep.all.fa.gz
FASTA
Tarsius_syrichta.tarSyr1.70.cdna.all.fa
Ensembl
Tarsius syrichta
1868482
tarSyr1
FASTA cDNA sequence for Tarsius syrichta
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/tarsius_syrichta/cdna/Tarsius_syrichta.tarSyr1.70.cdna.all.fa.rz, ensembl/release-70/fasta/tarsius_syrichta/cdna/Tarsius_syrichta.tarSyr1.70.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/tarsius_syrichta/cdna/Tarsius_syrichta.tarSyr1.70.cdna.all.fa.gz
FASTA
Tarsius_syrichta.tarSyr1.70.dna.toplevel.fa
Ensembl
Tarsius syrichta
1868482
tarSyr1
FASTA DNA sequence for Tarsius syrichta
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/tarsius_syrichta/dna/Tarsius_syrichta.tarSyr1.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/tarsius_syrichta/dna/Tarsius_syrichta.tarSyr1.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/tarsius_syrichta/dna/Tarsius_syrichta.tarSyr1.70.dna.toplevel.fa.gz
FASTA
Tarsius_syrichta.tarSyr1.70.dna_rm.toplevel.fa
Ensembl
Tarsius syrichta
1868482
tarSyr1
FASTA DNA sequence for Tarsius syrichta
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/tarsius_syrichta/dna/Tarsius_syrichta.tarSyr1.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/tarsius_syrichta/dna/Tarsius_syrichta.tarSyr1.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/tarsius_syrichta/dna/Tarsius_syrichta.tarSyr1.70.dna_rm.toplevel.fa.gz
FASTA
Tarsius_syrichta.tarSyr1.70.dna_sm.toplevel.fa
Ensembl
Tarsius syrichta
1868482
tarSyr1
FASTA DNA sequence for Tarsius syrichta
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/tarsius_syrichta/dna/Tarsius_syrichta.tarSyr1.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/tarsius_syrichta/dna/Tarsius_syrichta.tarSyr1.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/tarsius_syrichta/dna/Tarsius_syrichta.tarSyr1.70.dna_sm.toplevel.fa.gz
FASTA
Tarsius_syrichta.tarSyr1.70.ncrna.fa
Ensembl
Tarsius syrichta
1868482
tarSyr1
FASTA ncRNA sequence for Tarsius syrichta
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/tarsius_syrichta/ncrna/Tarsius_syrichta.tarSyr1.70.ncrna.fa.rz, ensembl/release-70/fasta/tarsius_syrichta/ncrna/Tarsius_syrichta.tarSyr1.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/tarsius_syrichta/ncrna/Tarsius_syrichta.tarSyr1.70.ncrna.fa.gz
FASTA
Tarsius_syrichta.tarSyr1.70.pep.all.fa
Ensembl
Tarsius syrichta
1868482
tarSyr1
FASTA pep sequence for Tarsius syrichta
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/tarsius_syrichta/pep/Tarsius_syrichta.tarSyr1.70.pep.all.fa.rz, ensembl/release-70/fasta/tarsius_syrichta/pep/Tarsius_syrichta.tarSyr1.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/tarsius_syrichta/pep/Tarsius_syrichta.tarSyr1.70.pep.all.fa.gz
FASTA
Tetraodon_nigroviridis.TETRAODON8.70.cdna.all.fa
Ensembl
Tetraodon nigroviridis
99883
TETRAODON8
FASTA cDNA sequence for Tetraodon nigroviridis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/tetraodon_nigroviridis/cdna/Tetraodon_nigroviridis.TETRAODON8.70.cdna.all.fa.rz, ensembl/release-70/fasta/tetraodon_nigroviridis/cdna/Tetraodon_nigroviridis.TETRAODON8.70.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/tetraodon_nigroviridis/cdna/Tetraodon_nigroviridis.TETRAODON8.70.cdna.all.fa.gz
FASTA
Tetraodon_nigroviridis.TETRAODON8.70.dna.toplevel.fa
Ensembl
Tetraodon nigroviridis
99883
TETRAODON8
FASTA DNA sequence for Tetraodon nigroviridis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/tetraodon_nigroviridis/dna/Tetraodon_nigroviridis.TETRAODON8.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/tetraodon_nigroviridis/dna/Tetraodon_nigroviridis.TETRAODON8.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/tetraodon_nigroviridis/dna/Tetraodon_nigroviridis.TETRAODON8.70.dna.toplevel.fa.gz
FASTA
Tetraodon_nigroviridis.TETRAODON8.70.dna_rm.toplevel.fa
Ensembl
Tetraodon nigroviridis
99883
TETRAODON8
FASTA DNA sequence for Tetraodon nigroviridis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/tetraodon_nigroviridis/dna/Tetraodon_nigroviridis.TETRAODON8.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/tetraodon_nigroviridis/dna/Tetraodon_nigroviridis.TETRAODON8.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/tetraodon_nigroviridis/dna/Tetraodon_nigroviridis.TETRAODON8.70.dna_rm.toplevel.fa.gz
FASTA
Tetraodon_nigroviridis.TETRAODON8.70.dna_sm.toplevel.fa
Ensembl
Tetraodon nigroviridis
99883
TETRAODON8
FASTA DNA sequence for Tetraodon nigroviridis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/tetraodon_nigroviridis/dna/Tetraodon_nigroviridis.TETRAODON8.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/tetraodon_nigroviridis/dna/Tetraodon_nigroviridis.TETRAODON8.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/tetraodon_nigroviridis/dna/Tetraodon_nigroviridis.TETRAODON8.70.dna_sm.toplevel.fa.gz
FASTA
Tetraodon_nigroviridis.TETRAODON8.70.ncrna.fa
Ensembl
Tetraodon nigroviridis
99883
TETRAODON8
FASTA ncRNA sequence for Tetraodon nigroviridis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/tetraodon_nigroviridis/ncrna/Tetraodon_nigroviridis.TETRAODON8.70.ncrna.fa.rz, ensembl/release-70/fasta/tetraodon_nigroviridis/ncrna/Tetraodon_nigroviridis.TETRAODON8.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/tetraodon_nigroviridis/ncrna/Tetraodon_nigroviridis.TETRAODON8.70.ncrna.fa.gz
FASTA
Tetraodon_nigroviridis.TETRAODON8.70.pep.all.fa
Ensembl
Tetraodon nigroviridis
99883
TETRAODON8
FASTA pep sequence for Tetraodon nigroviridis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/tetraodon_nigroviridis/pep/Tetraodon_nigroviridis.TETRAODON8.70.pep.all.fa.rz, ensembl/release-70/fasta/tetraodon_nigroviridis/pep/Tetraodon_nigroviridis.TETRAODON8.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/tetraodon_nigroviridis/pep/Tetraodon_nigroviridis.TETRAODON8.70.pep.all.fa.gz
FASTA
Tupaia_belangeri.TREESHREW.70.cdna.all.fa
Ensembl
Tupaia belangeri
37347
TREESHREW
FASTA cDNA sequence for Tupaia belangeri
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/tupaia_belangeri/cdna/Tupaia_belangeri.TREESHREW.70.cdna.all.fa.rz, ensembl/release-70/fasta/tupaia_belangeri/cdna/Tupaia_belangeri.TREESHREW.70.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/tupaia_belangeri/cdna/Tupaia_belangeri.TREESHREW.70.cdna.all.fa.gz
FASTA
Tupaia_belangeri.TREESHREW.70.dna.toplevel.fa
Ensembl
Tupaia belangeri
37347
TREESHREW
FASTA DNA sequence for Tupaia belangeri
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/tupaia_belangeri/dna/Tupaia_belangeri.TREESHREW.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/tupaia_belangeri/dna/Tupaia_belangeri.TREESHREW.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/tupaia_belangeri/dna/Tupaia_belangeri.TREESHREW.70.dna.toplevel.fa.gz
FASTA
Tupaia_belangeri.TREESHREW.70.dna_rm.toplevel.fa
Ensembl
Tupaia belangeri
37347
TREESHREW
FASTA DNA sequence for Tupaia belangeri
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/tupaia_belangeri/dna/Tupaia_belangeri.TREESHREW.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/tupaia_belangeri/dna/Tupaia_belangeri.TREESHREW.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/tupaia_belangeri/dna/Tupaia_belangeri.TREESHREW.70.dna_rm.toplevel.fa.gz
FASTA
Tupaia_belangeri.TREESHREW.70.dna_sm.toplevel.fa
Ensembl
Tupaia belangeri
37347
TREESHREW
FASTA DNA sequence for Tupaia belangeri
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/tupaia_belangeri/dna/Tupaia_belangeri.TREESHREW.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/tupaia_belangeri/dna/Tupaia_belangeri.TREESHREW.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/tupaia_belangeri/dna/Tupaia_belangeri.TREESHREW.70.dna_sm.toplevel.fa.gz
FASTA
Tupaia_belangeri.TREESHREW.70.ncrna.fa
Ensembl
Tupaia belangeri
37347
TREESHREW
FASTA ncRNA sequence for Tupaia belangeri
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/tupaia_belangeri/ncrna/Tupaia_belangeri.TREESHREW.70.ncrna.fa.rz, ensembl/release-70/fasta/tupaia_belangeri/ncrna/Tupaia_belangeri.TREESHREW.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/tupaia_belangeri/ncrna/Tupaia_belangeri.TREESHREW.70.ncrna.fa.gz
FASTA
Tupaia_belangeri.TREESHREW.70.pep.all.fa
Ensembl
Tupaia belangeri
37347
TREESHREW
FASTA pep sequence for Tupaia belangeri
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/tupaia_belangeri/pep/Tupaia_belangeri.TREESHREW.70.pep.all.fa.rz, ensembl/release-70/fasta/tupaia_belangeri/pep/Tupaia_belangeri.TREESHREW.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/tupaia_belangeri/pep/Tupaia_belangeri.TREESHREW.70.pep.all.fa.gz
FASTA
Tursiops_truncatus.turTru1.70.cdna.all.fa
Ensembl
Tursiops truncatus
9739
turTru1
FASTA cDNA sequence for Tursiops truncatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/tursiops_truncatus/cdna/Tursiops_truncatus.turTru1.70.cdna.all.fa.rz, ensembl/release-70/fasta/tursiops_truncatus/cdna/Tursiops_truncatus.turTru1.70.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/tursiops_truncatus/cdna/Tursiops_truncatus.turTru1.70.cdna.all.fa.gz
FASTA
Tursiops_truncatus.turTru1.70.dna.toplevel.fa
Ensembl
Tursiops truncatus
9739
turTru1
FASTA DNA sequence for Tursiops truncatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/tursiops_truncatus/dna/Tursiops_truncatus.turTru1.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/tursiops_truncatus/dna/Tursiops_truncatus.turTru1.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/tursiops_truncatus/dna/Tursiops_truncatus.turTru1.70.dna.toplevel.fa.gz
FASTA
Tursiops_truncatus.turTru1.70.dna_rm.toplevel.fa
Ensembl
Tursiops truncatus
9739
turTru1
FASTA DNA sequence for Tursiops truncatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/tursiops_truncatus/dna/Tursiops_truncatus.turTru1.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/tursiops_truncatus/dna/Tursiops_truncatus.turTru1.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/tursiops_truncatus/dna/Tursiops_truncatus.turTru1.70.dna_rm.toplevel.fa.gz
FASTA
Tursiops_truncatus.turTru1.70.dna_sm.toplevel.fa
Ensembl
Tursiops truncatus
9739
turTru1
FASTA DNA sequence for Tursiops truncatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/tursiops_truncatus/dna/Tursiops_truncatus.turTru1.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/tursiops_truncatus/dna/Tursiops_truncatus.turTru1.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/tursiops_truncatus/dna/Tursiops_truncatus.turTru1.70.dna_sm.toplevel.fa.gz
FASTA
Tursiops_truncatus.turTru1.70.ncrna.fa
Ensembl
Tursiops truncatus
9739
turTru1
FASTA ncRNA sequence for Tursiops truncatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/tursiops_truncatus/ncrna/Tursiops_truncatus.turTru1.70.ncrna.fa.rz, ensembl/release-70/fasta/tursiops_truncatus/ncrna/Tursiops_truncatus.turTru1.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/tursiops_truncatus/ncrna/Tursiops_truncatus.turTru1.70.ncrna.fa.gz
FASTA
Tursiops_truncatus.turTru1.70.pep.all.fa
Ensembl
Tursiops truncatus
9739
turTru1
FASTA pep sequence for Tursiops truncatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/tursiops_truncatus/pep/Tursiops_truncatus.turTru1.70.pep.all.fa.rz, ensembl/release-70/fasta/tursiops_truncatus/pep/Tursiops_truncatus.turTru1.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/tursiops_truncatus/pep/Tursiops_truncatus.turTru1.70.pep.all.fa.gz
FASTA
Vicugna_pacos.vicPac1.70.cdna.all.fa
Ensembl
Vicugna pacos
30538
vicPac1
FASTA cDNA sequence for Vicugna pacos
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/vicugna_pacos/cdna/Vicugna_pacos.vicPac1.70.cdna.all.fa.rz, ensembl/release-70/fasta/vicugna_pacos/cdna/Vicugna_pacos.vicPac1.70.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/vicugna_pacos/cdna/Vicugna_pacos.vicPac1.70.cdna.all.fa.gz
FASTA
Vicugna_pacos.vicPac1.70.dna.toplevel.fa
Ensembl
Vicugna pacos
30538
vicPac1
FASTA DNA sequence for Vicugna pacos
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/vicugna_pacos/dna/Vicugna_pacos.vicPac1.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/vicugna_pacos/dna/Vicugna_pacos.vicPac1.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/vicugna_pacos/dna/Vicugna_pacos.vicPac1.70.dna.toplevel.fa.gz
FASTA
Vicugna_pacos.vicPac1.70.dna_rm.toplevel.fa
Ensembl
Vicugna pacos
30538
vicPac1
FASTA DNA sequence for Vicugna pacos
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/vicugna_pacos/dna/Vicugna_pacos.vicPac1.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/vicugna_pacos/dna/Vicugna_pacos.vicPac1.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/vicugna_pacos/dna/Vicugna_pacos.vicPac1.70.dna_rm.toplevel.fa.gz
FASTA
Vicugna_pacos.vicPac1.70.dna_sm.toplevel.fa
Ensembl
Vicugna pacos
30538
vicPac1
FASTA DNA sequence for Vicugna pacos
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/vicugna_pacos/dna/Vicugna_pacos.vicPac1.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/vicugna_pacos/dna/Vicugna_pacos.vicPac1.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/vicugna_pacos/dna/Vicugna_pacos.vicPac1.70.dna_sm.toplevel.fa.gz
FASTA
Vicugna_pacos.vicPac1.70.ncrna.fa
Ensembl
Vicugna pacos
30538
vicPac1
FASTA ncRNA sequence for Vicugna pacos
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/vicugna_pacos/ncrna/Vicugna_pacos.vicPac1.70.ncrna.fa.rz, ensembl/release-70/fasta/vicugna_pacos/ncrna/Vicugna_pacos.vicPac1.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/vicugna_pacos/ncrna/Vicugna_pacos.vicPac1.70.ncrna.fa.gz
FASTA
Vicugna_pacos.vicPac1.70.pep.all.fa
Ensembl
Vicugna pacos
30538
vicPac1
FASTA pep sequence for Vicugna pacos
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/vicugna_pacos/pep/Vicugna_pacos.vicPac1.70.pep.all.fa.rz, ensembl/release-70/fasta/vicugna_pacos/pep/Vicugna_pacos.vicPac1.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/vicugna_pacos/pep/Vicugna_pacos.vicPac1.70.pep.all.fa.gz
FASTA
Xenopus_tropicalis.JGI_4.2.70.cdna.all.fa
Ensembl
Xenopus tropicalis
8364
JGI_4.2
FASTA cDNA sequence for Xenopus tropicalis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/xenopus_tropicalis/cdna/Xenopus_tropicalis.JGI_4.2.70.cdna.all.fa.rz, ensembl/release-70/fasta/xenopus_tropicalis/cdna/Xenopus_tropicalis.JGI_4.2.70.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/xenopus_tropicalis/cdna/Xenopus_tropicalis.JGI_4.2.70.cdna.all.fa.gz
FASTA
Xenopus_tropicalis.JGI_4.2.70.dna.toplevel.fa
Ensembl
Xenopus tropicalis
8364
JGI_4.2
FASTA DNA sequence for Xenopus tropicalis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/xenopus_tropicalis/dna/Xenopus_tropicalis.JGI_4.2.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/xenopus_tropicalis/dna/Xenopus_tropicalis.JGI_4.2.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/xenopus_tropicalis/dna/Xenopus_tropicalis.JGI_4.2.70.dna.toplevel.fa.gz
FASTA
Xenopus_tropicalis.JGI_4.2.70.dna_rm.toplevel.fa
Ensembl
Xenopus tropicalis
8364
JGI_4.2
FASTA DNA sequence for Xenopus tropicalis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/xenopus_tropicalis/dna/Xenopus_tropicalis.JGI_4.2.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/xenopus_tropicalis/dna/Xenopus_tropicalis.JGI_4.2.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/xenopus_tropicalis/dna/Xenopus_tropicalis.JGI_4.2.70.dna_rm.toplevel.fa.gz
FASTA
Xenopus_tropicalis.JGI_4.2.70.dna_sm.toplevel.fa
Ensembl
Xenopus tropicalis
8364
JGI_4.2
FASTA DNA sequence for Xenopus tropicalis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/xenopus_tropicalis/dna/Xenopus_tropicalis.JGI_4.2.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/xenopus_tropicalis/dna/Xenopus_tropicalis.JGI_4.2.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/xenopus_tropicalis/dna/Xenopus_tropicalis.JGI_4.2.70.dna_sm.toplevel.fa.gz
FASTA
Xenopus_tropicalis.JGI_4.2.70.ncrna.fa
Ensembl
Xenopus tropicalis
8364
JGI_4.2
FASTA ncRNA sequence for Xenopus tropicalis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/xenopus_tropicalis/ncrna/Xenopus_tropicalis.JGI_4.2.70.ncrna.fa.rz, ensembl/release-70/fasta/xenopus_tropicalis/ncrna/Xenopus_tropicalis.JGI_4.2.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/xenopus_tropicalis/ncrna/Xenopus_tropicalis.JGI_4.2.70.ncrna.fa.gz
FASTA
Xenopus_tropicalis.JGI_4.2.70.pep.all.fa
Ensembl
Xenopus tropicalis
8364
JGI_4.2
FASTA pep sequence for Xenopus tropicalis
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/xenopus_tropicalis/pep/Xenopus_tropicalis.JGI_4.2.70.pep.all.fa.rz, ensembl/release-70/fasta/xenopus_tropicalis/pep/Xenopus_tropicalis.JGI_4.2.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/xenopus_tropicalis/pep/Xenopus_tropicalis.JGI_4.2.70.pep.all.fa.gz
FASTA
Xiphophorus_maculatus.Xipmac4.4.2.70.cdna.all.fa
Ensembl
Xiphophorus maculatus
8083
Xipmac4.4.2
FASTA cDNA sequence for Xiphophorus maculatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/xiphophorus_maculatus/cdna/Xiphophorus_maculatus.Xipmac4.4.2.70.cdna.all.fa.rz, ensembl/release-70/fasta/xiphophorus_maculatus/cdna/Xiphophorus_maculatus.Xipmac4.4.2.70.cdna.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/xiphophorus_maculatus/cdna/Xiphophorus_maculatus.Xipmac4.4.2.70.cdna.all.fa.gz
FASTA
Xiphophorus_maculatus.Xipmac4.4.2.70.dna.toplevel.fa
Ensembl
Xiphophorus maculatus
8083
Xipmac4.4.2
FASTA DNA sequence for Xiphophorus maculatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/xiphophorus_maculatus/dna/Xiphophorus_maculatus.Xipmac4.4.2.70.dna.toplevel.fa.rz, ensembl/release-70/fasta/xiphophorus_maculatus/dna/Xiphophorus_maculatus.Xipmac4.4.2.70.dna.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/xiphophorus_maculatus/dna/Xiphophorus_maculatus.Xipmac4.4.2.70.dna.toplevel.fa.gz
FASTA
Xiphophorus_maculatus.Xipmac4.4.2.70.dna_rm.toplevel.fa
Ensembl
Xiphophorus maculatus
8083
Xipmac4.4.2
FASTA DNA sequence for Xiphophorus maculatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/xiphophorus_maculatus/dna/Xiphophorus_maculatus.Xipmac4.4.2.70.dna_rm.toplevel.fa.rz, ensembl/release-70/fasta/xiphophorus_maculatus/dna/Xiphophorus_maculatus.Xipmac4.4.2.70.dna_rm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/xiphophorus_maculatus/dna/Xiphophorus_maculatus.Xipmac4.4.2.70.dna_rm.toplevel.fa.gz
FASTA
Xiphophorus_maculatus.Xipmac4.4.2.70.dna_sm.toplevel.fa
Ensembl
Xiphophorus maculatus
8083
Xipmac4.4.2
FASTA DNA sequence for Xiphophorus maculatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/xiphophorus_maculatus/dna/Xiphophorus_maculatus.Xipmac4.4.2.70.dna_sm.toplevel.fa.rz, ensembl/release-70/fasta/xiphophorus_maculatus/dna/Xiphophorus_maculatus.Xipmac4.4.2.70.dna_sm.toplevel.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/xiphophorus_maculatus/dna/Xiphophorus_maculatus.Xipmac4.4.2.70.dna_sm.toplevel.fa.gz
FASTA
Xiphophorus_maculatus.Xipmac4.4.2.70.ncrna.fa
Ensembl
Xiphophorus maculatus
8083
Xipmac4.4.2
FASTA ncRNA sequence for Xiphophorus maculatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/xiphophorus_maculatus/ncrna/Xiphophorus_maculatus.Xipmac4.4.2.70.ncrna.fa.rz, ensembl/release-70/fasta/xiphophorus_maculatus/ncrna/Xiphophorus_maculatus.Xipmac4.4.2.70.ncrna.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/xiphophorus_maculatus/ncrna/Xiphophorus_maculatus.Xipmac4.4.2.70.ncrna.fa.gz
FASTA
Xiphophorus_maculatus.Xipmac4.4.2.70.pep.all.fa
Ensembl
Xiphophorus maculatus
8083
Xipmac4.4.2
FASTA pep sequence for Xiphophorus maculatus
1
Martin Morgan <mtmorgan@fhcrc.org>
2013-03-19
EnsemblFastaImportPreparer
c("FASTA", "ensembl", "sequence")
FaFile
ensembl/release-70/fasta/xiphophorus_maculatus/pep/Xiphophorus_maculatus.Xipmac4.4.2.70.pep.all.fa.rz, ensembl/release-70/fasta/xiphophorus_maculatus/pep/Xiphophorus_maculatus.Xipmac4.4.2.70.pep.all.fa.rz.fai
ftp://ftp.ensembl.org/pub/release-70/fasta/xiphophorus_maculatus/pep/Xiphophorus_maculatus.Xipmac4.4.2.70.pep.all.fa.gz
FASTA
Chromosome Band
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Chromosome Band'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cytoBand", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/cytoBand_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/cytoBand
UCSC track
STS Markers
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'STS Markers'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("stsMap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/stsMap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/stsMap
UCSC track
FISH Clones
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'FISH Clones'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("fishClones", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/fishClones_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/fishClones
UCSC track
Recomb Rate
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Recomb Rate'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("recombRate", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/recombRate_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/recombRate
UCSC track
ENCODE Pilot
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'ENCODE Pilot'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeRegions", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/encodeRegions_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/encodeRegions
UCSC track
Map Contigs
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Map Contigs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ctgPos", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/ctgPos_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/ctgPos
UCSC track
Assembly
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/gold
UCSC track
GRC Map Contigs
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'GRC Map Contigs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ctgPos2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/ctgPos2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/ctgPos2
UCSC track
Publications
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Publications'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("pubs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/pubs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/pubs
UCSC track
BAC End Pairs
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'BAC End Pairs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("bacEndPairs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/bacEndPairs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/bacEndPairs
UCSC track
Fosmid End Pairs
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Fosmid End Pairs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("fosEndPairs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/fosEndPairs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/fosEndPairs
UCSC track
Hg18 Diff
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Hg18 Diff'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("hg19ContigDiff", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/hg19ContigDiff_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/hg19ContigDiff
UCSC track
GRC Incident
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'GRC Incident'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("grcIncidentDb", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/grcIncidentDb_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/grcIncidentDb
UCSC track
Hi Seq Depth
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Hi Seq Depth'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("hiSeqDepth", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/hiSeqDepth_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/hiSeqDepth
UCSC track
Wiki Track
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Wiki Track'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wikiTrack", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/wikiTrack_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/wikiTrack
UCSC track
GAD View
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'GAD View'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gad", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/gad_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/gad
UCSC track
COSMIC
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'COSMIC'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cosmic", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/cosmic_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/cosmic
UCSC track
GWAS Catalog
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'GWAS Catalog'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gwasCatalog", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/gwasCatalog_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/gwasCatalog
UCSC track
ISCA
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'ISCA'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("iscaComposite", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/iscaComposite_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/iscaComposite
UCSC track
Coriell CNVs
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Coriell CNVs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("coriellDelDup", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/coriellDelDup_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/coriellDelDup
UCSC track
RGD Human QTL
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'RGD Human QTL'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rgdQtl", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/rgdQtl_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/rgdQtl
UCSC track
RGD Rat QTL
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'RGD Rat QTL'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rgdRatQtl", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/rgdRatQtl_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/rgdRatQtl
UCSC track
MGI Mouse QTL
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'MGI Mouse QTL'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("jaxQtlMapped", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/jaxQtlMapped_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/jaxQtlMapped
UCSC track
GeneReviews
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'GeneReviews'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("geneReviews", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/geneReviews_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/geneReviews
UCSC track
UCSC Genes
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'UCSC Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("knownGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/knownGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/knownGene
UCSC track
Old UCSC Genes
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Old UCSC Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("knownGeneOld5", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/knownGeneOld5_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/knownGeneOld5
UCSC track
Alt Events
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Alt Events'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("knownAlt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/knownAlt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/knownAlt
UCSC track
CCDS
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'CCDS'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ccdsGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/ccdsGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/ccdsGene
UCSC track
RefSeq Genes
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/refGene
UCSC track
Other RefSeq
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/xenoRefGene
UCSC track
MGC Genes
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'MGC Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mgcFullMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/mgcFullMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/mgcFullMrna
UCSC track
ORFeome Clones
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'ORFeome Clones'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("orfeomeMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/orfeomeMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/orfeomeMrna
UCSC track
Vega Genes
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Vega Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("vegaGeneComposite", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/vegaGeneComposite_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/vegaGeneComposite
UCSC track
Pfam in UCSC Gene
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Pfam in UCSC Gene'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ucscGenePfam", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/ucscGenePfam_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/ucscGenePfam
UCSC track
Ensembl Genes
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/ensGene
UCSC track
AceView Genes
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'AceView Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("acembly", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/acembly_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/acembly
UCSC track
SIB Genes
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'SIB Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("sibGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/sibGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/sibGene
UCSC track
N-SCAN
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'N-SCAN'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nscanGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/nscanGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/nscanGene
UCSC track
SGP Genes
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'SGP Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("sgpGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/sgpGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/sgpGene
UCSC track
Geneid Genes
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Geneid Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("geneid", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/geneid_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/geneid
UCSC track
Genscan Genes
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/genscan
UCSC track
Exoniphy
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Exoniphy'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("exoniphy", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/exoniphy_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/exoniphy
UCSC track
Yale Pseudo60
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Yale Pseudo60'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("pseudoYale60", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/pseudoYale60_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/pseudoYale60
UCSC track
tRNA Genes
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'tRNA Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/tRNAs
UCSC track
H-Inv 7.0
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'H-Inv 7.0'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("hinv70Composite", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/hinv70Composite_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/hinv70Composite
UCSC track
EvoFold
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'EvoFold'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("evofold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/evofold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/evofold
UCSC track
sno/miRNA
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'sno/miRNA'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgRna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/wgRna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/wgRna
UCSC track
IKMC Genes Mapped
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'IKMC Genes Mapped'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("hgIkmc", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/hgIkmc_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/hgIkmc
UCSC track
Human mRNAs
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Human mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/mrna
UCSC track
Spliced ESTs
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/intronEst
UCSC track
Human ESTs
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Human ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/est
UCSC track
Other mRNAs
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/xenoMrna
UCSC track
H-Inv
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'H-Inv'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("HInvGeneMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/HInvGeneMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/HInvGeneMrna
UCSC track
UniGene
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'UniGene'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("uniGene_3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/uniGene_3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/uniGene_3
UCSC track
Gene Bounds
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Gene Bounds'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rnaCluster", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/rnaCluster_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/rnaCluster
UCSC track
SIB Alt-Splicing
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'SIB Alt-Splicing'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("sibTxGraph", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/sibTxGraph_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/sibTxGraph
UCSC track
Poly(A)
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Poly(A)'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("polyA", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/polyA_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/polyA
UCSC track
CGAP SAGE
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'CGAP SAGE'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cgapSage", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/cgapSage_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/cgapSage
UCSC track
Human RNA Editing
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Human RNA Editing'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("darned", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/darned_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/darned
UCSC track
Affy Exon Array
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Affy Exon Array'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyExonArray", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/affyExonArray_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/affyExonArray
UCSC track
Affy GNF1H
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Affy GNF1H'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyGnf1h", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/affyGnf1h_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/affyGnf1h
UCSC track
Affy RNA Loc
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Affy RNA Loc'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeAffyRnaChip", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/wgEncodeAffyRnaChip_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/wgEncodeAffyRnaChip
UCSC track
Affy U133
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Affy U133'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyU133", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/affyU133_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/affyU133
UCSC track
Affy U133Plus2
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Affy U133Plus2'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyU133Plus2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/affyU133Plus2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/affyU133Plus2
UCSC track
Affy U95
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Affy U95'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyU95", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/affyU95_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/affyU95
UCSC track
Allen Brain
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Allen Brain'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("allenBrainAli", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/allenBrainAli_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/allenBrainAli
UCSC track
Burge RNA-seq
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Burge RNA-seq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("burgeRnaSeqGemMapperAlign", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/burgeRnaSeqGemMapperAlign_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/burgeRnaSeqGemMapperAlign
UCSC track
CSHL Small RNA-seq
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'CSHL Small RNA-seq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeCshlShortRnaSeq", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/wgEncodeCshlShortRnaSeq_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/wgEncodeCshlShortRnaSeq
UCSC track
GIS RNA PET
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'GIS RNA PET'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeGisRnaPet", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/wgEncodeGisRnaPet_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/wgEncodeGisRnaPet
UCSC track
GNF Atlas 2
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'GNF Atlas 2'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gnfAtlas2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/gnfAtlas2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/gnfAtlas2
UCSC track
Illumina WG-6
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Illumina WG-6'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("illuminaProbes", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/illuminaProbes_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/illuminaProbes
UCSC track
qPCR Primers
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'qPCR Primers'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("qPcrPrimers", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/qPcrPrimers_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/qPcrPrimers
UCSC track
RIKEN CAGE Loc
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'RIKEN CAGE Loc'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeRikenCage", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/wgEncodeRikenCage_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/wgEncodeRikenCage
UCSC track
CD34 DnaseI
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'CD34 DnaseI'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("eioJcviNAS", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/eioJcviNAS_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/eioJcviNAS
UCSC track
CpG Islands
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/cpgIslandExt
UCSC track
ORegAnno
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'ORegAnno'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("oreganno", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/oreganno_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/oreganno
UCSC track
SUNY SwitchGear
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'SUNY SwitchGear'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeSunySwitchgear", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/wgEncodeSunySwitchgear_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/wgEncodeSunySwitchgear
UCSC track
SwitchGear TSS
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'SwitchGear TSS'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("switchDbTss", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/switchDbTss_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/switchDbTss
UCSC track
TFBS Conserved
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'TFBS Conserved'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tfbsConsSites", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/tfbsConsSites_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/tfbsConsSites
UCSC track
TS miRNA sites
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'TS miRNA sites'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("targetScanS", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/targetScanS_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/targetScanS
UCSC track
UMMS Brain Hist
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'UMMS Brain Hist'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("uMassBrainHistone", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/uMassBrainHistone_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/uMassBrainHistone
UCSC track
Vista Enhancers
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Vista Enhancers'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("vistaEnhancers", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/vistaEnhancers_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/vistaEnhancers
UCSC track
Cons Indels MmCf
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Cons Indels MmCf'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("consIndelsHgMmCanFam", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/consIndelsHgMmCanFam_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/consIndelsHgMmCanFam
UCSC track
GERP
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'GERP'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("allHg19RS_BW", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/allHg19RS_BW_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/allHg19RS_BW
UCSC track
Evo Cpg
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Evo Cpg'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("evoCpg", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/evoCpg_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/evoCpg
UCSC track
Primate Chain/Net
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Primate Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("primateChainNet", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/primateChainNet_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/primateChainNet
UCSC track
Placental Chain/Net
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Placental Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("placentalChainNet", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/placentalChainNet_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/placentalChainNet
UCSC track
Vertebrate Chain/Net
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Vertebrate Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("vertebrateChainNet", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/vertebrateChainNet_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/vertebrateChainNet
UCSC track
H-C Coding Diffs
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'H-C Coding Diffs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ntHumChimpCodingDiff", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/ntHumChimpCodingDiff_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/ntHumChimpCodingDiff
UCSC track
5% Lowest S
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track '5% Lowest S'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ntSssTop5p", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/ntSssTop5p_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/ntSssTop5p
UCSC track
S SNPs
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'S SNPs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ntSssSnps", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/ntSssSnps_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/ntSssSnps
UCSC track
Neandertal Seq
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Neandertal Seq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ntSeqReads", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/ntSeqReads_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/ntSeqReads
UCSC track
Modern Derived
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Modern Derived'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("dhcHumDerDenAnc", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/dhcHumDerDenAnc_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/dhcHumDerDenAnc
UCSC track
Common SNPs(137)
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Common SNPs(137)'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("snp137Common", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/snp137Common_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/snp137Common
UCSC track
Flagged SNPs(137)
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Flagged SNPs(137)'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("snp137Flagged", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/snp137Flagged_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/snp137Flagged
UCSC track
Mult. SNPs(137)
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Mult. SNPs(137)'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("snp137Mult", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/snp137Mult_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/snp137Mult
UCSC track
Common SNPs(135)
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Common SNPs(135)'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("snp135Common", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/snp135Common_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/snp135Common
UCSC track
Flagged SNPs(135)
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Flagged SNPs(135)'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("snp135Flagged", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/snp135Flagged_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/snp135Flagged
UCSC track
Mult. SNPs(135)
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Mult. SNPs(135)'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("snp135Mult", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/snp135Mult_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/snp135Mult
UCSC track
Common SNPs(132)
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Common SNPs(132)'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("snp132Common", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/snp132Common_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/snp132Common
UCSC track
Flagged SNPs(132)
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Flagged SNPs(132)'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("snp132Flagged", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/snp132Flagged_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/snp132Flagged
UCSC track
Mult. SNPs(132)
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Mult. SNPs(132)'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("snp132Mult", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/snp132Mult_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/snp132Mult
UCSC track
SNPs (131)
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'SNPs (131)'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("snp131", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/snp131_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/snp131
UCSC track
1000G Ph1 Accsbl
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track '1000G Ph1 Accsbl'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tgpPhase1Accessibility", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/tgpPhase1Accessibility_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/tgpPhase1Accessibility
UCSC track
HAIB Genotype
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'HAIB Genotype'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeHaibGenotype", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/wgEncodeHaibGenotype_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/wgEncodeHaibGenotype
UCSC track
SNP/CNV Arrays
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'SNP/CNV Arrays'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genotypeArrays", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/genotypeArrays_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/genotypeArrays
UCSC track
HGDP Allele Freq
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'HGDP Allele Freq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("hgdpGeo", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/hgdpGeo_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/hgdpGeo
UCSC track
HapMap SNPs
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'HapMap SNPs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("hapmapSnps", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/hapmapSnps_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/hapmapSnps
UCSC track
DGV Struct Var
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'DGV Struct Var'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("dgv", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/dgv_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/dgv
UCSC track
Segmental Dups
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Segmental Dups'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genomicSuperDups", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/genomicSuperDups_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/genomicSuperDups
UCSC track
RepeatMasker
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/rmsk
UCSC track
Interrupted Rpts
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/nestedRepeats
UCSC track
Simple Repeats
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/simpleRepeat
UCSC track
Microsatellite
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Microsatellite'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("microsat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/microsat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/microsat
UCSC track
Self Chain
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Self Chain'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainSelf", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/chainSelf_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/chainSelf
UCSC track
Genome Variants
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Genome Variants'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("pgSnp", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/pgSnp_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/pgSnp
UCSC track
NumtS Sequence
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'NumtS Sequence'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("numtSeq", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/numtSeq_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/numtSeq
UCSC track
Chromosome Band
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Chromosome Band'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cytoBand", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/cytoBand_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/cytoBand
UCSC track
STS Markers
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'STS Markers'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("stsMap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/stsMap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/stsMap
UCSC track
FISH Clones
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'FISH Clones'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("fishClones", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/fishClones_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/fishClones
UCSC track
Recomb Rate
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Recomb Rate'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("recombRate", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/recombRate_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/recombRate
UCSC track
Map Contigs
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Map Contigs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ctgPos", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/ctgPos_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/ctgPos
UCSC track
Assembly
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/gold
UCSC track
Gap
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/gap
UCSC track
Coverage
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Coverage'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("clonePos", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/clonePos_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/clonePos
UCSC track
BAC End Pairs
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'BAC End Pairs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("bacEndPairs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/bacEndPairs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/bacEndPairs
UCSC track
Fosmid End Pairs
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Fosmid End Pairs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("fosEndPairs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/fosEndPairs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/fosEndPairs
UCSC track
Hg19 Diff
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Hg19 Diff'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("hg18ContigDiff", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/hg18ContigDiff_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/hg18ContigDiff
UCSC track
Hi Seq Depth
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Hi Seq Depth'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("hiSeqDepth", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/hiSeqDepth_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/hiSeqDepth
UCSC track
Wiki Track
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Wiki Track'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wikiTrack", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/wikiTrack_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/wikiTrack
UCSC track
GAD View
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'GAD View'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gad", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/gad_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/gad
UCSC track
R-DMR
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'R-DMR'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rdmr", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/rdmr_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/rdmr
UCSC track
GWAS Catalog
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'GWAS Catalog'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gwasCatalog", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/gwasCatalog_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/gwasCatalog
UCSC track
ISCA
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'ISCA'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("iscaComposite", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/iscaComposite_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/iscaComposite
UCSC track
RGD Human QTL
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'RGD Human QTL'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rgdQtl", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/rgdQtl_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/rgdQtl
UCSC track
RGD Rat QTL
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'RGD Rat QTL'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rgdRatQtl", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/rgdRatQtl_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/rgdRatQtl
UCSC track
MGI Mouse QTL
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'MGI Mouse QTL'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("jaxQtlMapped", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/jaxQtlMapped_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/jaxQtlMapped
UCSC track
GeneReviews
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'GeneReviews'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("geneReviews", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/geneReviews_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/geneReviews
UCSC track
UCSC Genes
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'UCSC Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("knownGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/knownGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/knownGene
UCSC track
Old UCSC Genes
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Old UCSC Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("knownGeneOld3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/knownGeneOld3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/knownGeneOld3
UCSC track
Alt Events
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Alt Events'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("knownAlt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/knownAlt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/knownAlt
UCSC track
Gencode Genes
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Gencode Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeSangerGencode", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/wgEncodeSangerGencode_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/wgEncodeSangerGencode
UCSC track
CCDS
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'CCDS'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ccdsGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/ccdsGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/ccdsGene
UCSC track
RefSeq Genes
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/refGene
UCSC track
Other RefSeq
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/xenoRefGene
UCSC track
MGC Genes
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'MGC Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mgcFullMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/mgcFullMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/mgcFullMrna
UCSC track
ORFeome Clones
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'ORFeome Clones'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("orfeomeMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/orfeomeMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/orfeomeMrna
UCSC track
Vega Genes
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Vega Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("vegaGeneComposite", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/vegaGeneComposite_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/vegaGeneComposite
UCSC track
Ensembl Genes
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/ensGene
UCSC track
AceView Genes
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'AceView Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("acembly", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/acembly_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/acembly
UCSC track
SIB Genes
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'SIB Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("sibGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/sibGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/sibGene
UCSC track
N-SCAN
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'N-SCAN'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/nscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/nscan
UCSC track
CONTRAST
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'CONTRAST'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("contrastGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/contrastGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/contrastGene
UCSC track
SGP Genes
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'SGP Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("sgpGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/sgpGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/sgpGene
UCSC track
Geneid Genes
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Geneid Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("geneid", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/geneid_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/geneid
UCSC track
Genscan Genes
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/genscan
UCSC track
Exoniphy
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Exoniphy'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("exoniphy", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/exoniphy_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/exoniphy
UCSC track
Augustus
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Augustus'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("augustus", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/augustus_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/augustus
UCSC track
RNA Genes
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'RNA Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rnaGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/rnaGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/rnaGene
UCSC track
tRNA Genes
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'tRNA Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/tRNAs
UCSC track
ACEScan
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'ACEScan'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("acescan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/acescan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/acescan
UCSC track
EvoFold
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'EvoFold'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("evofold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/evofold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/evofold
UCSC track
EvoFold v.2
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'EvoFold v.2'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("evofoldV2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/evofoldV2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/evofoldV2
UCSC track
sno/miRNA
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'sno/miRNA'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgRna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/wgRna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/wgRna
UCSC track
Pos Sel Genes
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Pos Sel Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mammalPsg", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/mammalPsg_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/mammalPsg
UCSC track
Human mRNAs
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Human mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/mrna
UCSC track
Spliced ESTs
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/intronEst
UCSC track
Human ESTs
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Human ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/est
UCSC track
Other mRNAs
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/xenoMrna
UCSC track
H-Inv
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'H-Inv'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("HInvGeneMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/HInvGeneMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/HInvGeneMrna
UCSC track
UniGene
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'UniGene'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("uniGene_3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/uniGene_3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/uniGene_3
UCSC track
Gene Bounds
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Gene Bounds'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rnaCluster", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/rnaCluster_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/rnaCluster
UCSC track
SIB Alt-Splicing
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'SIB Alt-Splicing'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("sibTxGraph", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/sibTxGraph_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/sibTxGraph
UCSC track
Poly(A)
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Poly(A)'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("polyA", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/polyA_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/polyA
UCSC track
CGAP SAGE
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'CGAP SAGE'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cgapSage", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/cgapSage_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/cgapSage
UCSC track
Human RNA Editing
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Human RNA Editing'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("darned", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/darned_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/darned
UCSC track
Affy GNF1H
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Affy GNF1H'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyGnf1h", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/affyGnf1h_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/affyGnf1h
UCSC track
Affy U133
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Affy U133'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyU133", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/affyU133_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/affyU133
UCSC track
Affy U133Plus2
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Affy U133Plus2'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyU133Plus2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/affyU133Plus2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/affyU133Plus2
UCSC track
Affy U95
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Affy U95'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyU95", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/affyU95_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/affyU95
UCSC track
Allen Brain
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Allen Brain'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("allenBrainAli", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/allenBrainAli_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/allenBrainAli
UCSC track
Bertone Yale TAR
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Bertone Yale TAR'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("yaleBertoneTars", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/yaleBertoneTars_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/yaleBertoneTars
UCSC track
CSHL Sm RNA-seq
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'CSHL Sm RNA-seq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeCshlShortRnaSeq", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/wgEncodeCshlShortRnaSeq_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/wgEncodeCshlShortRnaSeq
UCSC track
Duke Affy Exon
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Duke Affy Exon'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeDukeAffyExonArray", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/wgEncodeDukeAffyExonArray_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/wgEncodeDukeAffyExonArray
UCSC track
GIS PET RNA
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'GIS PET RNA'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeGisRnaPet", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/wgEncodeGisRnaPet_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/wgEncodeGisRnaPet
UCSC track
GNF Atlas 2
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'GNF Atlas 2'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gnfAtlas2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/gnfAtlas2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/gnfAtlas2
UCSC track
GNF Ratio
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'GNF Ratio'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyRatio", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/affyRatio_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/affyRatio
UCSC track
Illumina WG-6
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Illumina WG-6'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("illuminaProbes", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/illuminaProbes_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/illuminaProbes
UCSC track
RIKEN CAGE Loc
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'RIKEN CAGE Loc'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeRikenCage", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/wgEncodeRikenCage_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/wgEncodeRikenCage
UCSC track
UW Affy Exon
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'UW Affy Exon'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeUwAffyExonArray", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/wgEncodeUwAffyExonArray_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/wgEncodeUwAffyExonArray
UCSC track
Broad ChromHMM
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Broad ChromHMM'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeBroadHmm", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/wgEncodeBroadHmm_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/wgEncodeBroadHmm
UCSC track
Broad Histone
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Broad Histone'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeBroadChipSeq", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/wgEncodeBroadChipSeq_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/wgEncodeBroadChipSeq
UCSC track
CpG Islands
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/cpgIslandExt
UCSC track
EIO/JCVI NAS
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'EIO/JCVI NAS'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("eioJcviNAS", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/eioJcviNAS_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/eioJcviNAS
UCSC track
Eponine TSS
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Eponine TSS'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("eponine", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/eponine_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/eponine
UCSC track
FirstEF
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'FirstEF'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("firstEF", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/firstEF_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/firstEF
UCSC track
GIS ChIP-PET
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'GIS ChIP-PET'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeGisChipPetAll", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/wgEncodeGisChipPetAll_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/wgEncodeGisChipPetAll
UCSC track
HAIB Methyl-seq
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'HAIB Methyl-seq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeHudsonalphaMethylSeq", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/wgEncodeHudsonalphaMethylSeq_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/wgEncodeHudsonalphaMethylSeq
UCSC track
HAIB Methyl27
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'HAIB Methyl27'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeHudsonalphaMethyl27", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/wgEncodeHudsonalphaMethyl27_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/wgEncodeHudsonalphaMethyl27
UCSC track
NHGRI Bi-Pro
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'NHGRI Bi-Pro'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeNhgriBip", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/wgEncodeNhgriBip_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/wgEncodeNhgriBip
UCSC track
Open Chromatin
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Open Chromatin'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeChromatinMap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/wgEncodeChromatinMap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/wgEncodeChromatinMap
UCSC track
ORegAnno
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'ORegAnno'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("oreganno", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/oreganno_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/oreganno
UCSC track
SUNY RBP
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'SUNY RBP'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeSunyalbanyRnaGeneChip", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/wgEncodeSunyalbanyRnaGeneChip_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/wgEncodeSunyalbanyRnaGeneChip
UCSC track
SwitchGear TSS
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'SwitchGear TSS'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("switchDbTss", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/switchDbTss_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/switchDbTss
UCSC track
TFBS Conserved
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'TFBS Conserved'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tfbsConsSites", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/tfbsConsSites_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/tfbsConsSites
UCSC track
TS miRNA sites
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'TS miRNA sites'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("targetScanS", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/targetScanS_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/targetScanS
UCSC track
UW DNase DGF
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'UW DNase DGF'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeUwDGF", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/wgEncodeUwDGF_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/wgEncodeUwDGF
UCSC track
UW DNaseI HS
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'UW DNaseI HS'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeUwDnaseSeq", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/wgEncodeUwDnaseSeq_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/wgEncodeUwDnaseSeq
UCSC track
UW Histone
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'UW Histone'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeUwChIPSeq", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/wgEncodeUwChIPSeq_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/wgEncodeUwChIPSeq
UCSC track
Vista Enhancers
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Vista Enhancers'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("vistaEnhancers", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/vistaEnhancers_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/vistaEnhancers
UCSC track
Yale TFBS
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Yale TFBS'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeYaleChIPseq", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/wgEncodeYaleChIPseq_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/wgEncodeYaleChIPseq
UCSC track
FOX2 CLIP-seq
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'FOX2 CLIP-seq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("fox2ClipSeqComp", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/fox2ClipSeqComp_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/fox2ClipSeqComp
UCSC track
28-Way Most Cons
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track '28-Way Most Cons'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mostConserved28way", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/mostConserved28way_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/mostConserved28way
UCSC track
17-Way Most Cons
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track '17-Way Most Cons'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("phastConsElements17way", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/phastConsElements17way_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/phastConsElements17way
UCSC track
Cons Indels MmCf
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Cons Indels MmCf'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("consIndelsHgMmCanFam", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/consIndelsHgMmCanFam_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/consIndelsHgMmCanFam
UCSC track
Evo Cpg
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Evo Cpg'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("evoCpg", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/evoCpg_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/evoCpg
UCSC track
Tetraodon Ecores
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Tetraodon Ecores'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ecoresTetNig1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/ecoresTetNig1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/ecoresTetNig1
UCSC track
Chimp Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Chimp Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetPanTro2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetPanTro2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetPanTro2
UCSC track
Orangutan Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Orangutan Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetPonAbe2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetPonAbe2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetPonAbe2
UCSC track
Rhesus Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Rhesus Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetRheMac2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetRheMac2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetRheMac2
UCSC track
Marmoset Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Marmoset Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCalJac1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetCalJac1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetCalJac1
UCSC track
Guinea pig Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Guinea pig Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCavPor3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetCavPor3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetCavPor3
UCSC track
Rat Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Rat Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetRn4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetRn4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetRn4
UCSC track
Mouse Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetMm9
UCSC track
Dog Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Dog Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCanFam2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetCanFam2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetCanFam2
UCSC track
Cat Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Cat Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetFelCat3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetFelCat3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetFelCat3
UCSC track
Horse Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Horse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetEquCab1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetEquCab1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetEquCab1
UCSC track
bosTau4 Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'bosTau4 Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetBosTau4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetBosTau4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetBosTau4
UCSC track
Tenrec Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Tenrec Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetEchTel1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetEchTel1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetEchTel1
UCSC track
Opossum Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Opossum Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMonDom4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetMonDom4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetMonDom4
UCSC track
Platypus Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Platypus Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetOrnAna1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetOrnAna1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetOrnAna1
UCSC track
Lizard Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Lizard Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetAnoCar1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetAnoCar1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetAnoCar1
UCSC track
Zebra finch Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Zebra finch Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetTaeGut1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetTaeGut1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetTaeGut1
UCSC track
Chicken Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Chicken Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetGalGal3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetGalGal3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetGalGal3
UCSC track
xenTro2 Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'xenTro2 Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetXenTro2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetXenTro2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetXenTro2
UCSC track
Zebrafish Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Zebrafish Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetDanRer5", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetDanRer5_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetDanRer5
UCSC track
Medaka Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Medaka Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetOryLat2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetOryLat2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetOryLat2
UCSC track
Stickleback Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Stickleback Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetGasAcu1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetGasAcu1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetGasAcu1
UCSC track
Fugu Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Fugu Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetFr2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetFr2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetFr2
UCSC track
Tetraodon Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Tetraodon Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetTetNig1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetTetNig1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetTetNig1
UCSC track
Lamprey Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Lamprey Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetPetMar1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetPetMar1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetPetMar1
UCSC track
Lancelet Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Lancelet Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetBraFlo1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetBraFlo1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetBraFlo1
UCSC track
S. purpuratus Chain/Net
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'S. purpuratus Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetStrPur2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainNetStrPur2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainNetStrPur2
UCSC track
H-C Coding Diffs
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'H-C Coding Diffs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ntHumChimpCodingDiff", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/ntHumChimpCodingDiff_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/ntHumChimpCodingDiff
UCSC track
5% Lowest S
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track '5% Lowest S'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ntSssTop5p", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/ntSssTop5p_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/ntSssTop5p
UCSC track
S SNPs
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'S SNPs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ntSssSnps", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/ntSssSnps_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/ntSssSnps
UCSC track
Neandertal Seq
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Neandertal Seq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ntSeqReads", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/ntSeqReads_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/ntSeqReads
UCSC track
SNPs (130)
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'SNPs (130)'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("snp130", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/snp130_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/snp130
UCSC track
SNPs (129)
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'SNPs (129)'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("snp129", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/snp129_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/snp129
UCSC track
SNPs (128)
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'SNPs (128)'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("snp128", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/snp128_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/snp128
UCSC track
SNPs (126)
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'SNPs (126)'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("snp126", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/snp126_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/snp126
UCSC track
Agilent Array
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Agilent Array'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genotypeArrays", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/genotypeArrays_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/genotypeArrays
UCSC track
Common Cell CNV
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Common Cell CNV'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeHudsonalphaCnv", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/wgEncodeHudsonalphaCnv_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/wgEncodeHudsonalphaCnv
UCSC track
HGDP Allele Freq
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'HGDP Allele Freq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("hgdpGeo", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/hgdpGeo_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/hgdpGeo
UCSC track
HapMap SNPs
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'HapMap SNPs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("hapmapSnps", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/hapmapSnps_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/hapmapSnps
UCSC track
Tajima's D SNPs
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Tajima's D SNPs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tajdSnp", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/tajdSnp_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/tajdSnp
UCSC track
DGV Struct Var
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'DGV Struct Var'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("dgv", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/dgv_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/dgv
UCSC track
HGSV Discordant
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'HGSV Discordant'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("kiddEichlerDisc", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/kiddEichlerDisc_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/kiddEichlerDisc
UCSC track
Segmental Dups
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Segmental Dups'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genomicSuperDups", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/genomicSuperDups_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/genomicSuperDups
UCSC track
Structural Var
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Structural Var'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cnp", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/cnp_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/cnp
UCSC track
Exapted Repeats
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Exapted Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("exaptedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/exaptedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/exaptedRepeats
UCSC track
RepeatMasker
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/rmsk
UCSC track
RepMask 3.2.7
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'RepMask 3.2.7'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmskRM327", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/rmskRM327_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/rmskRM327
UCSC track
Interrupted Rpts
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/nestedRepeats
UCSC track
Intr Rpts 3.2.7
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Intr Rpts 3.2.7'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeatsRM327", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/nestedRepeatsRM327_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/nestedRepeatsRM327
UCSC track
Simple Repeats
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/simpleRepeat
UCSC track
Microsatellite
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Microsatellite'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("microsat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/microsat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/microsat
UCSC track
Self Chain
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Self Chain'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainSelf", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/chainSelf_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/chainSelf
UCSC track
Genome Variants
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Genome Variants'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("pgSnp", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/pgSnp_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/pgSnp
UCSC track
NumtS Sequence
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'NumtS Sequence'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("numtSeq", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/numtSeq_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/numtSeq
UCSC track
ENCODE Regions
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'ENCODE Regions'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeRegions", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/encodeRegions_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/encodeRegions
UCSC track
Pseudogenes
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Pseudogenes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodePseudogene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/encodePseudogene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/encodePseudogene
UCSC track
Known+Pred RNA
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Known+Pred RNA'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeRna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/encodeRna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/encodeRna
UCSC track
Vienna RNAz
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Vienna RNAz'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeUViennaRnaz", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/encodeUViennaRnaz_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/encodeUViennaRnaz
UCSC track
BU First Exon
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'BU First Exon'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeBuFirstExon", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/encodeBuFirstExon_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/encodeBuFirstExon
UCSC track
Riken CAGE
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Riken CAGE'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeRikenCage", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/encodeRikenCage_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/encodeRikenCage
UCSC track
Stanf Promoter
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Stanf Promoter'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeStanfordPromoters", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/encodeStanfordPromoters_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/encodeStanfordPromoters
UCSC track
Stanf RTPCR
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Stanf RTPCR'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeStanfordRtPcr", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/encodeStanfordRtPcr_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/encodeStanfordRtPcr
UCSC track
36-Way TBA
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track '36-Way TBA'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeMsaTbaDec07", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/encodeMsaTbaDec07_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/encodeMsaTbaDec07
UCSC track
NHGRI DIPs
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'NHGRI DIPs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeIndels", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/encodeIndels_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/encodeIndels
UCSC track
Chromosome Band
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Chromosome Band'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cytoBand", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/cytoBand_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/cytoBand
UCSC track
STS Markers
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'STS Markers'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("stsMap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/stsMap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/stsMap
UCSC track
FISH Clones
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'FISH Clones'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("fishClones", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/fishClones_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/fishClones
UCSC track
Recomb Rate
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Recomb Rate'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("recombRate", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/recombRate_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/recombRate
UCSC track
Map Contigs
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Map Contigs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ctgPos", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/ctgPos_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/ctgPos
UCSC track
Assembly
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/gold
UCSC track
Gap
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/gap
UCSC track
Coverage
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Coverage'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("clonePos", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/clonePos_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/clonePos
UCSC track
BAC End Pairs
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'BAC End Pairs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("bacEndPairs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/bacEndPairs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/bacEndPairs
UCSC track
Fosmid End Pairs
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Fosmid End Pairs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("fosEndPairs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/fosEndPairs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/fosEndPairs
UCSC track
WSSD Duplication
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'WSSD Duplication'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("celeraDupPositive", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/celeraDupPositive_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/celeraDupPositive
UCSC track
RGD QTL
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'RGD QTL'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rgdQtl", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/rgdQtl_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/rgdQtl
UCSC track
Known Genes
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Known Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("knownGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/knownGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/knownGene
UCSC track
CCDS
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'CCDS'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ccdsGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/ccdsGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/ccdsGene
UCSC track
RefSeq Genes
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/refGene
UCSC track
Other RefSeq
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/xenoRefGene
UCSC track
MGC Genes
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'MGC Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mgcFullMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/mgcFullMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/mgcFullMrna
UCSC track
ORFeome Clones
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'ORFeome Clones'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("orfeomeMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/orfeomeMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/orfeomeMrna
UCSC track
Vega Pseudogenes
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Vega Pseudogenes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("vegaPseudoGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/vegaPseudoGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/vegaPseudoGene
UCSC track
Ensembl Genes
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/ensGene
UCSC track
AceView Genes
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'AceView Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("acembly", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/acembly_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/acembly
UCSC track
ECgene Genes
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'ECgene Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ECgene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/ECgene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/ECgene
UCSC track
N-SCAN
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'N-SCAN'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/nscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/nscan
UCSC track
SGP Genes
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'SGP Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("sgpGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/sgpGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/sgpGene
UCSC track
Geneid Genes
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Geneid Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("geneid", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/geneid_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/geneid
UCSC track
Genscan Genes
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/genscan
UCSC track
Exoniphy
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Exoniphy'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("exoniphy", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/exoniphy_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/exoniphy
UCSC track
Augustus
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Augustus'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("augustus", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/augustus_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/augustus
UCSC track
Yale Pseudo
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Yale Pseudo'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("pseudoYale", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/pseudoYale_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/pseudoYale
UCSC track
ACEScan
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'ACEScan'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("acescan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/acescan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/acescan
UCSC track
EvoFold
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'EvoFold'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("evofold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/evofold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/evofold
UCSC track
sno/miRNA
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'sno/miRNA'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgRna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/wgRna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/wgRna
UCSC track
ExonWalk
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'ExonWalk'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("exonWalk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/exonWalk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/exonWalk
UCSC track
Human mRNAs
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Human mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/mrna
UCSC track
Spliced ESTs
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/intronEst
UCSC track
Human ESTs
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Human ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/est
UCSC track
Other mRNAs
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/xenoMrna
UCSC track
H-Inv
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'H-Inv'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("HInvGeneMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/HInvGeneMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/HInvGeneMrna
UCSC track
TIGR Gene Index
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'TIGR Gene Index'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tigrGeneIndex", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/tigrGeneIndex_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/tigrGeneIndex
UCSC track
UniGene
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'UniGene'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("uniGene_2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/uniGene_2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/uniGene_2
UCSC track
Gene Bounds
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Gene Bounds'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rnaCluster", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/rnaCluster_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/rnaCluster
UCSC track
Alt-Splicing
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Alt-Splicing'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("altGraphX", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/altGraphX_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/altGraphX
UCSC track
Affy GNF1H
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Affy GNF1H'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyGnf1h", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/affyGnf1h_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/affyGnf1h
UCSC track
Affy HuEx 1.0
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Affy HuEx 1.0'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyHuEx1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/affyHuEx1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/affyHuEx1
UCSC track
Affy Txn Phase2
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Affy Txn Phase2'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyTxnPhase2b", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/affyTxnPhase2b_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/affyTxnPhase2b
UCSC track
Affy U133
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Affy U133'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyU133", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/affyU133_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/affyU133
UCSC track
Affy U133Plus2
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Affy U133Plus2'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyU133Plus2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/affyU133Plus2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/affyU133Plus2
UCSC track
Affy U95
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Affy U95'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyU95", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/affyU95_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/affyU95
UCSC track
Allen Brain
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Allen Brain'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("allenBrainAli", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/allenBrainAli_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/allenBrainAli
UCSC track
Bertone Yale TAR
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Bertone Yale TAR'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("yaleBertoneTars", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/yaleBertoneTars_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/yaleBertoneTars
UCSC track
GNF Atlas 2
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'GNF Atlas 2'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gnfAtlas2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/gnfAtlas2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/gnfAtlas2
UCSC track
GNF Ratio
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'GNF Ratio'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyRatio", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/affyRatio_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/affyRatio
UCSC track
CpG Islands
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/cpgIslandExt
UCSC track
Eponine TSS
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Eponine TSS'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("eponine", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/eponine_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/eponine
UCSC track
FirstEF
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'FirstEF'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("firstEF", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/firstEF_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/firstEF
UCSC track
PicTar miRNA
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'PicTar miRNA'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("picTar", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/picTar_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/picTar
UCSC track
SGMO/EIO CD34 HS
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'SGMO/EIO CD34 HS'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("sangamoDnaseHs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/sangamoDnaseHs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/sangamoDnaseHs
UCSC track
SwitchGear TSS
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'SwitchGear TSS'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("switchDbTss", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/switchDbTss_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/switchDbTss
UCSC track
T-ScanS miRNA
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'T-ScanS miRNA'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("targetScanS", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/targetScanS_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/targetScanS
UCSC track
TFBS Conserved
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'TFBS Conserved'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tfbsConsSites", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/tfbsConsSites_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/tfbsConsSites
UCSC track
Vista Enhancers
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Vista Enhancers'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("vistaEnhancers", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/vistaEnhancers_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/vistaEnhancers
UCSC track
FOX2 CLIP-seq
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'FOX2 CLIP-seq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("fox2ClipSeqComp", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/fox2ClipSeqComp_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/fox2ClipSeqComp
UCSC track
Most Conserved
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Most Conserved'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("phastConsElements17way", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/phastConsElements17way_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/phastConsElements17way
UCSC track
Cons Indels MmCf
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Cons Indels MmCf'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("consIndelsHgMmCanFam", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/consIndelsHgMmCanFam_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/consIndelsHgMmCanFam
UCSC track
Fugu Blat
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Fugu Blat'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("blatFr1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/blatFr1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/blatFr1
UCSC track
Tetraodon Ecores
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Tetraodon Ecores'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ecoresTetNig1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/ecoresTetNig1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/ecoresTetNig1
UCSC track
Chimp Chain/Net
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Chimp Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetPanTro1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/chainNetPanTro1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/chainNetPanTro1
UCSC track
Cow Synteny
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Cow Synteny'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("syntenyCow", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/syntenyCow_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/syntenyCow
UCSC track
Cow BAC Ends
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Cow BAC Ends'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("bacendsCow", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/bacendsCow_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/bacendsCow
UCSC track
Rhesus Chain/Net
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Rhesus Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetRheMac2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/chainNetRheMac2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/chainNetRheMac2
UCSC track
Rat Chain/Net
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Rat Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetRn4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/chainNetRn4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/chainNetRn4
UCSC track
Mouse Chain/Net
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm7", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/chainNetMm7_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/chainNetMm7
UCSC track
Dog Chain/Net
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Dog Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCanFam2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/chainNetCanFam2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/chainNetCanFam2
UCSC track
Cow Chain/Net
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Cow Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetBosTau2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/chainNetBosTau2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/chainNetBosTau2
UCSC track
Opossum Chain/Net
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Opossum Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMonDom1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/chainNetMonDom1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/chainNetMonDom1
UCSC track
Chicken Chain/Net
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Chicken Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetGalGal2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/chainNetGalGal2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/chainNetGalGal2
UCSC track
X. tropicalis Chain/Net
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'X. tropicalis Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetXenTro1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/chainNetXenTro1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/chainNetXenTro1
UCSC track
Zebrafish Chain/Net
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Zebrafish Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetDanRer3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/chainNetDanRer3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/chainNetDanRer3
UCSC track
Fugu Chain/Net
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Fugu Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetFr1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/chainNetFr1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/chainNetFr1
UCSC track
Tetraodon Chain/Net
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Tetraodon Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetTetNig1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/chainNetTetNig1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/chainNetTetNig1
UCSC track
SNPs
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'SNPs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("snp125", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/snp125_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/snp125
UCSC track
SNP Arrays
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'SNP Arrays'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("snpArray", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/snpArray_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/snpArray
UCSC track
HapMap SNPs
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'HapMap SNPs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("hapmapSnps", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/hapmapSnps_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/hapmapSnps
UCSC track
HapMap LD
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'HapMap LD'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("hapmapLd", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/hapmapLd_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/hapmapLd
UCSC track
Tajima's D SNPs
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Tajima's D SNPs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tajdSnp", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/tajdSnp_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/tajdSnp
UCSC track
DGV Struct Var
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'DGV Struct Var'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("dgv", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/dgv_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/dgv
UCSC track
HGSV Validated
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'HGSV Validated'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("kiddEichlerValid", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/kiddEichlerValid_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/kiddEichlerValid
UCSC track
HGSV Discordant
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'HGSV Discordant'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("kiddEichlerDisc", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/kiddEichlerDisc_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/kiddEichlerDisc
UCSC track
SNP Recomb Hots
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'SNP Recomb Hots'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("snpRecombHotspot", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/snpRecombHotspot_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/snpRecombHotspot
UCSC track
Segmental Dups
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Segmental Dups'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genomicSuperDups", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/genomicSuperDups_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/genomicSuperDups
UCSC track
Structural Var
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Structural Var'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cnp", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/cnp_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/cnp
UCSC track
RepeatMasker
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/rmsk
UCSC track
Simple Repeats
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/simpleRepeat
UCSC track
Microsatellite
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Microsatellite'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("microsat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/microsat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/microsat
UCSC track
RIPs
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'RIPs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("retroposons", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/retroposons_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/retroposons
UCSC track
ENCODE Regions
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'ENCODE Regions'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeRegions", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeRegions_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeRegions
UCSC track
Pseudogenes
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Pseudogenes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodePseudogene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodePseudogene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodePseudogene
UCSC track
GIS-PET RNA
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'GIS-PET RNA'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeGisRnaPet", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeGisRnaPet_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeGisRnaPet
UCSC track
Known+Pred RNA
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Known+Pred RNA'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeRna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeRna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeRna
UCSC track
UCSC EvoFold
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'UCSC EvoFold'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeEvoFold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeEvoFold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeEvoFold
UCSC track
Vienna RNAz
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Vienna RNAz'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeUViennaRnaz", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeUViennaRnaz_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeUViennaRnaz
UCSC track
Affy Transfrags
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Affy Transfrags'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeAffyRnaTransfrags", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeAffyRnaTransfrags_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeAffyRnaTransfrags
UCSC track
BU First Exon
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'BU First Exon'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeBuFirstExon", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeBuFirstExon_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeBuFirstExon
UCSC track
Riken CAGE
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Riken CAGE'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeRikenCage", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeRikenCage_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeRikenCage
UCSC track
Stanf Promoter
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Stanf Promoter'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeStanfordPromoters", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeStanfordPromoters_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeStanfordPromoters
UCSC track
Stanf RTPCR
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Stanf RTPCR'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeStanfordRtPcr", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeStanfordRtPcr_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeStanfordRtPcr
UCSC track
Yale TAR
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Yale TAR'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeYaleAffyRNATars", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeYaleAffyRNATars_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeYaleAffyRNATars
UCSC track
GIS ChIP-PET
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'GIS ChIP-PET'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeGisChipPetAll", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeGisChipPetAll_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeGisChipPetAll
UCSC track
UCD Ng ChIP Hits
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'UCD Ng ChIP Hits'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeUcDavisChipHits", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeUcDavisChipHits_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeUcDavisChipHits
UCSC track
Yale STAT1 Sites
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Yale STAT1 Sites'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeYaleChIPSTAT1Sites", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeYaleChIPSTAT1Sites_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeYaleChIPSTAT1Sites
UCSC track
Yale ChIP Sites
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Yale ChIP Sites'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeYaleChipSites", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeYaleChipSites_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeYaleChipSites
UCSC track
Yale ChIP RFBR
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Yale ChIP RFBR'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeYaleChipRfbr", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeYaleChipRfbr_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeYaleChipRfbr
UCSC track
Consens Elements
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Consens Elements'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeMsaElements", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeMsaElements_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeMsaElements
UCSC track
TBA Alignment
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'TBA Alignment'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeTbaAlign", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeTbaAlign_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeTbaAlign
UCSC track
TBA Elements
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'TBA Elements'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeTbaElements", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeTbaElements_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeTbaElements
UCSC track
MLAGAN Alignment
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'MLAGAN Alignment'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeMlaganAlign", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeMlaganAlign_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeMlaganAlign
UCSC track
MLAGAN Elements
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'MLAGAN Elements'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeMlaganElements", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeMlaganElements_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeMlaganElements
UCSC track
MAVID Alignment
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'MAVID Alignment'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeMavidAlign", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeMavidAlign_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeMavidAlign
UCSC track
MAVID Elements
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'MAVID Elements'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeMavidElements", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeMavidElements_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeMavidElements
UCSC track
DLESS
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'DLESS'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeDless", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeDless_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeDless
UCSC track
NHGRI DIPs
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'NHGRI DIPs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeIndels", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeIndels_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeIndels
UCSC track
SNP Recomb Hots
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'SNP Recomb Hots'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeRecombHotspot", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeRecombHotspot_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeRecombHotspot
UCSC track
Sanger Assoc
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'Sanger Assoc'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeSangerGenoExprAssociation", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeSangerGenoExprAssociation_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeSangerGenoExprAssociation
UCSC track
HapMap SNPs
UCSC
Homo sapiens
9606
hg17
GRanges object from UCSC track 'HapMap SNPs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeHapMapAlleleFreq", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg17/database/encodeHapMapAlleleFreq_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg17/database/encodeHapMapAlleleFreq
UCSC track
Chromosome Band
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Chromosome Band'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cytoBand", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/cytoBand_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/cytoBand
UCSC track
STS Markers
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'STS Markers'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("stsMap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/stsMap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/stsMap
UCSC track
FISH Clones
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'FISH Clones'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("fishClones", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/fishClones_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/fishClones
UCSC track
Recomb Rate
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Recomb Rate'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("recombRate", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/recombRate_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/recombRate
UCSC track
Map Contigs
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Map Contigs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ctgPos", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/ctgPos_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/ctgPos
UCSC track
Assembly
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/gold
UCSC track
Gap
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/gap
UCSC track
Coverage
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Coverage'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("clonePos", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/clonePos_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/clonePos
UCSC track
BAC End Pairs
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'BAC End Pairs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("bacEndPairs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/bacEndPairs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/bacEndPairs
UCSC track
Fosmid End Pairs
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Fosmid End Pairs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("fosEndPairs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/fosEndPairs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/fosEndPairs
UCSC track
WSSD Coverage
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'WSSD Coverage'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("celeraCoverage", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/celeraCoverage_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/celeraCoverage
UCSC track
WSSD Duplication
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'WSSD Duplication'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("celeraDupPositive", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/celeraDupPositive_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/celeraDupPositive
UCSC track
WSSD Overlay
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'WSSD Overlay'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("celeraOverlay", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/celeraOverlay_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/celeraOverlay
UCSC track
Known Genes
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Known Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("knownGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/knownGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/knownGene
UCSC track
Known Genes II
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Known Genes II'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("hg17Kg", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/hg17Kg_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/hg17Kg
UCSC track
RefSeq Genes
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/refGene
UCSC track
Other RefSeq
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/xenoRefGene
UCSC track
MGC Genes
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'MGC Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mgcFullMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/mgcFullMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/mgcFullMrna
UCSC track
Ensembl Genes
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/ensGene
UCSC track
Ensembl EST Genes
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Ensembl EST Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensEstGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/ensEstGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/ensEstGene
UCSC track
Acembly Genes
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Acembly Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("acembly", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/acembly_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/acembly
UCSC track
ECgene Genes
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'ECgene Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ECgene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/ECgene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/ECgene
UCSC track
Twinscan
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Twinscan'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("twinscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/twinscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/twinscan
UCSC track
SGP Genes
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'SGP Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("sgpGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/sgpGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/sgpGene
UCSC track
Fgenesh++ Genes
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Fgenesh++ Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("softberryGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/softberryGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/softberryGene
UCSC track
Geneid Genes
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Geneid Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("geneid", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/geneid_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/geneid
UCSC track
Genscan Genes
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/genscan
UCSC track
Exoniphy
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Exoniphy'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("exoniphy", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/exoniphy_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/exoniphy
UCSC track
RNA Genes
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'RNA Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rnaGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/rnaGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/rnaGene
UCSC track
Yale Pseudo
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Yale Pseudo'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("pseudoYale", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/pseudoYale_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/pseudoYale
UCSC track
EvoFold
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'EvoFold'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("evofold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/evofold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/evofold
UCSC track
miRNA
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'miRNA'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("miRNA", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/miRNA_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/miRNA
UCSC track
Human mRNAs
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Human mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/mrna
UCSC track
Spliced ESTs
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/intronEst
UCSC track
Human ESTs
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Human ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/est
UCSC track
Other mRNAs
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/xenoMrna
UCSC track
H-Inv
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'H-Inv'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("HInvGeneMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/HInvGeneMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/HInvGeneMrna
UCSC track
TIGR Gene Index
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'TIGR Gene Index'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tigrGeneIndex", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/tigrGeneIndex_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/tigrGeneIndex
UCSC track
UniGene
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'UniGene'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("uniGene_2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/uniGene_2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/uniGene_2
UCSC track
Gene Bounds
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Gene Bounds'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rnaCluster", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/rnaCluster_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/rnaCluster
UCSC track
Alt-Splicing
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Alt-Splicing'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("altGraphX", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/altGraphX_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/altGraphX
UCSC track
Affy GNF1H
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Affy GNF1H'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyGnf1h", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/affyGnf1h_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/affyGnf1h
UCSC track
Affy HuEx 1.0
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Affy HuEx 1.0'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyHuEx1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/affyHuEx1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/affyHuEx1
UCSC track
Affy U133
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Affy U133'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyU133", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/affyU133_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/affyU133
UCSC track
Affy U95
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Affy U95'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyU95", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/affyU95_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/affyU95
UCSC track
GNF Atlas 2
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'GNF Atlas 2'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gnfAtlas2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/gnfAtlas2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/gnfAtlas2
UCSC track
GNF Ratio
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'GNF Ratio'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyRatio", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/affyRatio_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/affyRatio
UCSC track
CpG Islands
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIsland", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/cpgIsland_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/cpgIsland
UCSC track
FirstEF
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'FirstEF'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("firstEF", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/firstEF_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/firstEF
UCSC track
NHGRI DNaseI-HS
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'NHGRI DNaseI-HS'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nhgriDnaseHs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/nhgriDnaseHs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/nhgriDnaseHs
UCSC track
TFBS Conserved
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'TFBS Conserved'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tfbsCons", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/tfbsCons_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/tfbsCons
UCSC track
Fugu Blat
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Fugu Blat'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("blatFr1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/blatFr1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/blatFr1
UCSC track
Fugu Ecores
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Fugu Ecores'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ecoresFr1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/ecoresFr1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/ecoresFr1
UCSC track
Tetraodon Ecores
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Tetraodon Ecores'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ecoresTetraodon", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/ecoresTetraodon_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/ecoresTetraodon
UCSC track
Chimp Recip Chain
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Chimp Recip Chain'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rBestChainPanTro1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/rBestChainPanTro1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/rBestChainPanTro1
UCSC track
Chimp Recip Net
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Chimp Recip Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rBestNetPanTro1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/rBestNetPanTro1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/rBestNetPanTro1
UCSC track
Chimp Deletions
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Chimp Deletions'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chimpDels", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/chimpDels_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/chimpDels
UCSC track
Chimp Diff
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Chimp Diff'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chimpSimpleDiff", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/chimpSimpleDiff_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/chimpSimpleDiff
UCSC track
Rat Chain/Net
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Rat Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetRn3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/chainNetRn3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/chainNetRn3
UCSC track
Mouse Chain/Net
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm6", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/chainNetMm6_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/chainNetMm6
UCSC track
Chicken Chain/Net
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Chicken Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetGalGal2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/chainNetGalGal2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/chainNetGalGal2
UCSC track
Fugu Chain/Net
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Fugu Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetFr1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/chainNetFr1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/chainNetFr1
UCSC track
HapMap LD
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'HapMap LD'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("hapmapLd", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/hapmapLd_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/hapmapLd
UCSC track
Tajima's D SNPs
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Tajima's D SNPs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tajdSnp", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/tajdSnp_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/tajdSnp
UCSC track
SNP Recomb Hots
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'SNP Recomb Hots'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("snpRecombHotspot", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/snpRecombHotspot_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/snpRecombHotspot
UCSC track
Segmental Dups
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Segmental Dups'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genomicSuperDups", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/genomicSuperDups_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/genomicSuperDups
UCSC track
Structural Var
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Structural Var'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cnp", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/cnp_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/cnp
UCSC track
RepeatMasker
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/rmsk
UCSC track
Microsatellites
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Microsatellites'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("vntr", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/vntr_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/vntr
UCSC track
Simple Repeats
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/simpleRepeat
UCSC track
Self Chain
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Self Chain'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainSelf", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/chainSelf_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/chainSelf
UCSC track
ENCODE Regions
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'ENCODE Regions'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeRegions", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/encodeRegions_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/encodeRegions
UCSC track
Gencode Genes
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Gencode Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeGencodeGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/encodeGencodeGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/encodeGencodeGene
UCSC track
Gencode Introns
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Gencode Introns'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeGencodeIntron", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/encodeGencodeIntron_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/encodeGencodeIntron
UCSC track
GIS-PET RNA
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'GIS-PET RNA'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeGisRnaPet", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/encodeGisRnaPet_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/encodeGisRnaPet
UCSC track
Known+Pred RNA
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Known+Pred RNA'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeRna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/encodeRna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/encodeRna
UCSC track
TBA23 EvoFold
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'TBA23 EvoFold'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encode_tba23EvoFold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/encode_tba23EvoFold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/encode_tba23EvoFold
UCSC track
Affy Transfrags
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Affy Transfrags'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeAffyRnaTransfrags", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/encodeAffyRnaTransfrags_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/encodeAffyRnaTransfrags
UCSC track
Riken CAGE
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Riken CAGE'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeRikenCage", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/encodeRikenCage_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/encodeRikenCage
UCSC track
Yale RNA
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Yale RNA'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeYaleAffyRNATransMap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/encodeYaleAffyRNATransMap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/encodeYaleAffyRNATransMap
UCSC track
Yale TAR
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Yale TAR'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeYaleAffyRNATars", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/encodeYaleAffyRNATars_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/encodeYaleAffyRNATars
UCSC track
Affy 25bp Probes
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Affy 25bp Probes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeAffyEncode25bpProbes", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/encodeAffyEncode25bpProbes_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/encodeAffyEncode25bpProbes
UCSC track
Affy Sites
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Affy Sites'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeAffyChIpHl60Sites", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/encodeAffyChIpHl60Sites_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/encodeAffyChIpHl60Sites
UCSC track
GIS p53 5FU HCT116
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'GIS p53 5FU HCT116'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeGisChipPet", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/encodeGisChipPet_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/encodeGisChipPet
UCSC track
Consens Elements
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Consens Elements'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeAllElements", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/encodeAllElements_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/encodeAllElements
UCSC track
TBA Alignment
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'TBA Alignment'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeTbaAlign", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/encodeTbaAlign_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/encodeTbaAlign
UCSC track
TBA Elements
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'TBA Elements'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeTbaElements", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/encodeTbaElements_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/encodeTbaElements
UCSC track
MLAGAN Alignment
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'MLAGAN Alignment'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeMlaganAlign", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/encodeMlaganAlign_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/encodeMlaganAlign
UCSC track
MLAGAN Elements
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'MLAGAN Elements'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeMlaganElements", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/encodeMlaganElements_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/encodeMlaganElements
UCSC track
Reseq Regions
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Reseq Regions'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeReseqRegions", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/encodeReseqRegions_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/encodeReseqRegions
UCSC track
NHGRI DIPs
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'NHGRI DIPs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeIndels", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/encodeIndels_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/encodeIndels
UCSC track
SNP Recomb Hots
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'SNP Recomb Hots'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeRecombHotspot", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/encodeRecombHotspot_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/encodeRecombHotspot
UCSC track
HapMap SNPs
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'HapMap SNPs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeHapMapAlleleFreq", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/encodeHapMapAlleleFreq_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/encodeHapMapAlleleFreq
UCSC track
Gencode Unann
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Gencode Unann'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeGencodeRegions", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/encodeGencodeRegions_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/encodeGencodeRegions
UCSC track
Consens Unann TF
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Consens Unann TF'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeWorkshopSelections", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/encodeWorkshopSelections_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/encodeWorkshopSelections
UCSC track
Unann Transfrags
UCSC
Homo sapiens
9606
hg16
GRanges object from UCSC track 'Unann Transfrags'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("encodeNoncodingTransFrags", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg16/database/encodeNoncodingTransFrags_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg16/database/encodeNoncodingTransFrags
UCSC track
Assembly
UCSC
Vicugna pacos
30538
vicPac1
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/vicPac1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/vicPac1/database/gold
UCSC track
Gap
UCSC
Vicugna pacos
30538
vicPac1
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/vicPac1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/vicPac1/database/gap
UCSC track
Ensembl Assembly
UCSC
Vicugna pacos
30538
vicPac1
GRanges object from UCSC track 'Ensembl Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensemblGeneScaffold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/vicPac1/database/ensemblGeneScaffold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/vicPac1/database/ensemblGeneScaffold
UCSC track
Other RefSeq
UCSC
Vicugna pacos
30538
vicPac1
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/vicPac1/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/vicPac1/database/xenoRefGene
UCSC track
Ensembl Genes
UCSC
Vicugna pacos
30538
vicPac1
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/vicPac1/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/vicPac1/database/ensGene
UCSC track
Genscan Genes
UCSC
Vicugna pacos
30538
vicPac1
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/vicPac1/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/vicPac1/database/genscan
UCSC track
Spliced ESTs
UCSC
Vicugna pacos
30538
vicPac1
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/vicPac1/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/vicPac1/database/intronEst
UCSC track
Alpaca ESTs
UCSC
Vicugna pacos
30538
vicPac1
GRanges object from UCSC track 'Alpaca ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/vicPac1/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/vicPac1/database/est
UCSC track
CpG Islands
UCSC
Vicugna pacos
30538
vicPac1
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/vicPac1/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/vicPac1/database/cpgIslandExt
UCSC track
Mouse Chain/Net
UCSC
Vicugna pacos
30538
vicPac1
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm10", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/vicPac1/database/chainNetMm10_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/vicPac1/database/chainNetMm10
UCSC track
RepeatMasker
UCSC
Vicugna pacos
30538
vicPac1
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/vicPac1/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/vicPac1/database/rmsk
UCSC track
Interrupted Rpts
UCSC
Vicugna pacos
30538
vicPac1
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/vicPac1/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/vicPac1/database/nestedRepeats
UCSC track
WM + SDust
UCSC
Vicugna pacos
30538
vicPac1
GRanges object from UCSC track 'WM + SDust'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("windowmaskerSdust", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/vicPac1/database/windowmaskerSdust_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/vicPac1/database/windowmaskerSdust
UCSC track
Simple Repeats
UCSC
Vicugna pacos
30538
vicPac1
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/vicPac1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/vicPac1/database/simpleRepeat
UCSC track
Assembly
UCSC
Dasypus novemcinctus
9361
dasNov3
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dasNov3/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dasNov3/database/gold
UCSC track
Gap
UCSC
Dasypus novemcinctus
9361
dasNov3
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dasNov3/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dasNov3/database/gap
UCSC track
Other RefSeq
UCSC
Dasypus novemcinctus
9361
dasNov3
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dasNov3/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dasNov3/database/xenoRefGene
UCSC track
Genscan Genes
UCSC
Dasypus novemcinctus
9361
dasNov3
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dasNov3/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dasNov3/database/genscan
UCSC track
Armadillo mRNAs
UCSC
Dasypus novemcinctus
9361
dasNov3
GRanges object from UCSC track 'Armadillo mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dasNov3/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dasNov3/database/mrna
UCSC track
Other mRNAs
UCSC
Dasypus novemcinctus
9361
dasNov3
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dasNov3/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dasNov3/database/xenoMrna
UCSC track
CpG Islands
UCSC
Dasypus novemcinctus
9361
dasNov3
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dasNov3/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dasNov3/database/cpgIslandExt
UCSC track
Mouse Chain/Net
UCSC
Dasypus novemcinctus
9361
dasNov3
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm10", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dasNov3/database/chainNetMm10_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dasNov3/database/chainNetMm10
UCSC track
RepeatMasker
UCSC
Dasypus novemcinctus
9361
dasNov3
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dasNov3/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dasNov3/database/rmsk
UCSC track
Interrupted Rpts
UCSC
Dasypus novemcinctus
9361
dasNov3
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dasNov3/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dasNov3/database/nestedRepeats
UCSC track
WM + SDust
UCSC
Dasypus novemcinctus
9361
dasNov3
GRanges object from UCSC track 'WM + SDust'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("windowmaskerSdust", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dasNov3/database/windowmaskerSdust_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dasNov3/database/windowmaskerSdust
UCSC track
Simple Repeats
UCSC
Dasypus novemcinctus
9361
dasNov3
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dasNov3/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dasNov3/database/simpleRepeat
UCSC track
Assembly
UCSC
Otolemur garnettii
30611
otoGar3
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/otoGar3/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/otoGar3/database/gold
UCSC track
Gap
UCSC
Otolemur garnettii
30611
otoGar3
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/otoGar3/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/otoGar3/database/gap
UCSC track
Other RefSeq
UCSC
Otolemur garnettii
30611
otoGar3
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/otoGar3/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/otoGar3/database/xenoRefGene
UCSC track
Ensembl Genes
UCSC
Otolemur garnettii
30611
otoGar3
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/otoGar3/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/otoGar3/database/ensGene
UCSC track
Genscan Genes
UCSC
Otolemur garnettii
30611
otoGar3
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/otoGar3/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/otoGar3/database/genscan
UCSC track
Bushbaby mRNAs
UCSC
Otolemur garnettii
30611
otoGar3
GRanges object from UCSC track 'Bushbaby mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/otoGar3/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/otoGar3/database/mrna
UCSC track
Other mRNAs
UCSC
Otolemur garnettii
30611
otoGar3
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/otoGar3/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/otoGar3/database/xenoMrna
UCSC track
CpG Islands
UCSC
Otolemur garnettii
30611
otoGar3
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/otoGar3/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/otoGar3/database/cpgIslandExt
UCSC track
Mouse Chain/Net
UCSC
Otolemur garnettii
30611
otoGar3
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm10", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/otoGar3/database/chainNetMm10_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/otoGar3/database/chainNetMm10
UCSC track
RepeatMasker
UCSC
Otolemur garnettii
30611
otoGar3
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/otoGar3/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/otoGar3/database/rmsk
UCSC track
Interrupted Rpts
UCSC
Otolemur garnettii
30611
otoGar3
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/otoGar3/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/otoGar3/database/nestedRepeats
UCSC track
Simple Repeats
UCSC
Otolemur garnettii
30611
otoGar3
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/otoGar3/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/otoGar3/database/simpleRepeat
UCSC track
Assembly
UCSC
Papio hamadryas
9557
papHam1
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papHam1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papHam1/database/gold
UCSC track
Gap
UCSC
Papio hamadryas
9557
papHam1
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papHam1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papHam1/database/gap
UCSC track
Other RefSeq
UCSC
Papio hamadryas
9557
papHam1
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papHam1/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papHam1/database/xenoRefGene
UCSC track
Genscan Genes
UCSC
Papio hamadryas
9557
papHam1
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papHam1/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papHam1/database/genscan
UCSC track
Baboon mRNAs
UCSC
Papio hamadryas
9557
papHam1
GRanges object from UCSC track 'Baboon mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papHam1/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papHam1/database/mrna
UCSC track
Other mRNAs
UCSC
Papio hamadryas
9557
papHam1
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papHam1/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papHam1/database/xenoMrna
UCSC track
CpG Islands
UCSC
Papio hamadryas
9557
papHam1
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papHam1/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papHam1/database/cpgIslandExt
UCSC track
Gorilla Chain/Net
UCSC
Papio hamadryas
9557
papHam1
GRanges object from UCSC track 'Gorilla Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetGorGor3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papHam1/database/chainNetGorGor3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papHam1/database/chainNetGorGor3
UCSC track
Marmoset Chain/Net
UCSC
Papio hamadryas
9557
papHam1
GRanges object from UCSC track 'Marmoset Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCalJac3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papHam1/database/chainNetCalJac3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papHam1/database/chainNetCalJac3
UCSC track
Mouse Chain/Net
UCSC
Papio hamadryas
9557
papHam1
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm10", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papHam1/database/chainNetMm10_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papHam1/database/chainNetMm10
UCSC track
RepeatMasker
UCSC
Papio hamadryas
9557
papHam1
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papHam1/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papHam1/database/rmsk
UCSC track
Interrupted Rpts
UCSC
Papio hamadryas
9557
papHam1
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papHam1/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papHam1/database/nestedRepeats
UCSC track
WM + SDust
UCSC
Papio hamadryas
9557
papHam1
GRanges object from UCSC track 'WM + SDust'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("windowmaskerSdust", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papHam1/database/windowmaskerSdust_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papHam1/database/windowmaskerSdust
UCSC track
Simple Repeats
UCSC
Papio hamadryas
9557
papHam1
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papHam1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papHam1/database/simpleRepeat
UCSC track
Assembly
UCSC
Papio anubis
9555
papAnu2
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papAnu2/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papAnu2/database/gold
UCSC track
Gap
UCSC
Papio anubis
9555
papAnu2
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papAnu2/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papAnu2/database/gap
UCSC track
RefSeq Genes
UCSC
Papio anubis
9555
papAnu2
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papAnu2/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papAnu2/database/refGene
UCSC track
Other RefSeq
UCSC
Papio anubis
9555
papAnu2
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papAnu2/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papAnu2/database/xenoRefGene
UCSC track
Genscan Genes
UCSC
Papio anubis
9555
papAnu2
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papAnu2/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papAnu2/database/genscan
UCSC track
Baboon mRNAs
UCSC
Papio anubis
9555
papAnu2
GRanges object from UCSC track 'Baboon mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papAnu2/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papAnu2/database/mrna
UCSC track
Spliced ESTs
UCSC
Papio anubis
9555
papAnu2
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papAnu2/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papAnu2/database/intronEst
UCSC track
Baboon ESTs
UCSC
Papio anubis
9555
papAnu2
GRanges object from UCSC track 'Baboon ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papAnu2/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papAnu2/database/est
UCSC track
Other mRNAs
UCSC
Papio anubis
9555
papAnu2
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papAnu2/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papAnu2/database/xenoMrna
UCSC track
CpG Islands
UCSC
Papio anubis
9555
papAnu2
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papAnu2/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papAnu2/database/cpgIslandExt
UCSC track
RepeatMasker
UCSC
Papio anubis
9555
papAnu2
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papAnu2/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papAnu2/database/rmsk
UCSC track
Interrupted Rpts
UCSC
Papio anubis
9555
papAnu2
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papAnu2/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papAnu2/database/nestedRepeats
UCSC track
WM + SDust
UCSC
Papio anubis
9555
papAnu2
GRanges object from UCSC track 'WM + SDust'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("windowmaskerSdust", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papAnu2/database/windowmaskerSdust_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papAnu2/database/windowmaskerSdust
UCSC track
Simple Repeats
UCSC
Papio anubis
9555
papAnu2
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/papAnu2/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/papAnu2/database/simpleRepeat
UCSC track
Assembly
UCSC
Felis catus
9685
felCat5
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat5/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat5/database/gold
UCSC track
Gap
UCSC
Felis catus
9685
felCat5
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat5/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat5/database/gap
UCSC track
RefSeq Genes
UCSC
Felis catus
9685
felCat5
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat5/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat5/database/refGene
UCSC track
Other RefSeq
UCSC
Felis catus
9685
felCat5
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat5/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat5/database/xenoRefGene
UCSC track
Genscan Genes
UCSC
Felis catus
9685
felCat5
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat5/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat5/database/genscan
UCSC track
Cat mRNAs
UCSC
Felis catus
9685
felCat5
GRanges object from UCSC track 'Cat mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat5/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat5/database/mrna
UCSC track
Spliced ESTs
UCSC
Felis catus
9685
felCat5
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat5/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat5/database/intronEst
UCSC track
Cat ESTs
UCSC
Felis catus
9685
felCat5
GRanges object from UCSC track 'Cat ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat5/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat5/database/est
UCSC track
Other mRNAs
UCSC
Felis catus
9685
felCat5
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat5/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat5/database/xenoMrna
UCSC track
CpG Islands
UCSC
Felis catus
9685
felCat5
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat5/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat5/database/cpgIslandExt
UCSC track
Mouse Chain/Net
UCSC
Felis catus
9685
felCat5
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm10", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat5/database/chainNetMm10_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat5/database/chainNetMm10
UCSC track
RepeatMasker
UCSC
Felis catus
9685
felCat5
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat5/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat5/database/rmsk
UCSC track
Interrupted Rpts
UCSC
Felis catus
9685
felCat5
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat5/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat5/database/nestedRepeats
UCSC track
WM + SDust
UCSC
Felis catus
9685
felCat5
GRanges object from UCSC track 'WM + SDust'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("windowmaskerSdust", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat5/database/windowmaskerSdust_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat5/database/windowmaskerSdust
UCSC track
Simple Repeats
UCSC
Felis catus
9685
felCat5
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat5/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat5/database/simpleRepeat
UCSC track
Assembly
UCSC
Felis catus
9685
felCat4
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat4/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat4/database/gold
UCSC track
Scaffolds
UCSC
Felis catus
9685
felCat4
GRanges object from UCSC track 'Scaffolds'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ctgPos2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat4/database/ctgPos2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat4/database/ctgPos2
UCSC track
Gap
UCSC
Felis catus
9685
felCat4
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat4/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat4/database/gap
UCSC track
RefSeq Genes
UCSC
Felis catus
9685
felCat4
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat4/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat4/database/refGene
UCSC track
Other RefSeq
UCSC
Felis catus
9685
felCat4
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat4/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat4/database/xenoRefGene
UCSC track
N-SCAN
UCSC
Felis catus
9685
felCat4
GRanges object from UCSC track 'N-SCAN'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nscanGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat4/database/nscanGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat4/database/nscanGene
UCSC track
tRNA Genes
UCSC
Felis catus
9685
felCat4
GRanges object from UCSC track 'tRNA Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat4/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat4/database/tRNAs
UCSC track
Human Proteins
UCSC
Felis catus
9685
felCat4
GRanges object from UCSC track 'Human Proteins'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("blastHg18KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat4/database/blastHg18KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat4/database/blastHg18KG
UCSC track
Cat mRNAs
UCSC
Felis catus
9685
felCat4
GRanges object from UCSC track 'Cat mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat4/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat4/database/mrna
UCSC track
Spliced ESTs
UCSC
Felis catus
9685
felCat4
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat4/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat4/database/intronEst
UCSC track
Cat ESTs
UCSC
Felis catus
9685
felCat4
GRanges object from UCSC track 'Cat ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat4/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat4/database/est
UCSC track
Other mRNAs
UCSC
Felis catus
9685
felCat4
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat4/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat4/database/xenoMrna
UCSC track
CpG Islands
UCSC
Felis catus
9685
felCat4
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat4/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat4/database/cpgIslandExt
UCSC track
Panda Chain/Net
UCSC
Felis catus
9685
felCat4
GRanges object from UCSC track 'Panda Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetAilMel1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat4/database/chainNetAilMel1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat4/database/chainNetAilMel1
UCSC track
Dog Chain/Net
UCSC
Felis catus
9685
felCat4
GRanges object from UCSC track 'Dog Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCanFam2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat4/database/chainNetCanFam2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat4/database/chainNetCanFam2
UCSC track
Mouse Chain/Net
UCSC
Felis catus
9685
felCat4
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat4/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat4/database/chainNetMm9
UCSC track
Human Chain/Net
UCSC
Felis catus
9685
felCat4
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg19", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat4/database/chainNetHg19_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat4/database/chainNetHg19
UCSC track
Opossum Chain/Net
UCSC
Felis catus
9685
felCat4
GRanges object from UCSC track 'Opossum Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMonDom5", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat4/database/chainNetMonDom5_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat4/database/chainNetMonDom5
UCSC track
RepeatMasker
UCSC
Felis catus
9685
felCat4
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat4/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat4/database/rmsk
UCSC track
Interrupted Rpts
UCSC
Felis catus
9685
felCat4
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat4/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat4/database/nestedRepeats
UCSC track
Simple Repeats
UCSC
Felis catus
9685
felCat4
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat4/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat4/database/simpleRepeat
UCSC track
Assembly
UCSC
Felis catus
9685
felCat3
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat3/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat3/database/gold
UCSC track
Gap
UCSC
Felis catus
9685
felCat3
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat3/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat3/database/gap
UCSC track
Ensembl Assembly
UCSC
Felis catus
9685
felCat3
GRanges object from UCSC track 'Ensembl Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensemblGeneScaffold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat3/database/ensemblGeneScaffold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat3/database/ensemblGeneScaffold
UCSC track
RefSeq Genes
UCSC
Felis catus
9685
felCat3
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat3/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat3/database/refGene
UCSC track
Other RefSeq
UCSC
Felis catus
9685
felCat3
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat3/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat3/database/xenoRefGene
UCSC track
Ensembl Genes
UCSC
Felis catus
9685
felCat3
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat3/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat3/database/ensGene
UCSC track
N-SCAN
UCSC
Felis catus
9685
felCat3
GRanges object from UCSC track 'N-SCAN'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nscanGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat3/database/nscanGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat3/database/nscanGene
UCSC track
SGP Genes
UCSC
Felis catus
9685
felCat3
GRanges object from UCSC track 'SGP Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("sgpGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat3/database/sgpGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat3/database/sgpGene
UCSC track
Geneid Genes
UCSC
Felis catus
9685
felCat3
GRanges object from UCSC track 'Geneid Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("geneid", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat3/database/geneid_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat3/database/geneid
UCSC track
Genscan Genes
UCSC
Felis catus
9685
felCat3
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat3/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat3/database/genscan
UCSC track
tRNA Genes
UCSC
Felis catus
9685
felCat3
GRanges object from UCSC track 'tRNA Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat3/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat3/database/tRNAs
UCSC track
Human Proteins
UCSC
Felis catus
9685
felCat3
GRanges object from UCSC track 'Human Proteins'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("blastHg18KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat3/database/blastHg18KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat3/database/blastHg18KG
UCSC track
Cat mRNAs
UCSC
Felis catus
9685
felCat3
GRanges object from UCSC track 'Cat mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat3/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat3/database/mrna
UCSC track
Spliced ESTs
UCSC
Felis catus
9685
felCat3
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat3/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat3/database/intronEst
UCSC track
Cat ESTs
UCSC
Felis catus
9685
felCat3
GRanges object from UCSC track 'Cat ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat3/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat3/database/est
UCSC track
Other mRNAs
UCSC
Felis catus
9685
felCat3
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat3/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat3/database/xenoMrna
UCSC track
CpG Islands
UCSC
Felis catus
9685
felCat3
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat3/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat3/database/cpgIslandExt
UCSC track
Most Conserved
UCSC
Felis catus
9685
felCat3
GRanges object from UCSC track 'Most Conserved'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("phastConsElements4way", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat3/database/phastConsElements4way_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat3/database/phastConsElements4way
UCSC track
Dog Chain/Net
UCSC
Felis catus
9685
felCat3
GRanges object from UCSC track 'Dog Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCanFam2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat3/database/chainNetCanFam2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat3/database/chainNetCanFam2
UCSC track
Mouse Chain/Net
UCSC
Felis catus
9685
felCat3
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm8", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat3/database/chainNetMm8_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat3/database/chainNetMm8
UCSC track
Human Chain/Net
UCSC
Felis catus
9685
felCat3
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg19", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat3/database/chainNetHg19_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat3/database/chainNetHg19
UCSC track
RepeatMasker
UCSC
Felis catus
9685
felCat3
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat3/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat3/database/rmsk
UCSC track
Simple Repeats
UCSC
Felis catus
9685
felCat3
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat3/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat3/database/simpleRepeat
UCSC track
Microsatellite
UCSC
Felis catus
9685
felCat3
GRanges object from UCSC track 'Microsatellite'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("microsat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/felCat3/database/microsat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/felCat3/database/microsat
UCSC track
Assembly
UCSC
Pan troglodytes
9598
panTro4
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro4/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro4/database/gold
UCSC track
Gap
UCSC
Pan troglodytes
9598
panTro4
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro4/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro4/database/gap
UCSC track
RefSeq Genes
UCSC
Pan troglodytes
9598
panTro4
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro4/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro4/database/refGene
UCSC track
Other RefSeq
UCSC
Pan troglodytes
9598
panTro4
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro4/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro4/database/xenoRefGene
UCSC track
Ensembl Genes
UCSC
Pan troglodytes
9598
panTro4
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro4/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro4/database/ensGene
UCSC track
Genscan Genes
UCSC
Pan troglodytes
9598
panTro4
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro4/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro4/database/genscan
UCSC track
Chimp mRNAs
UCSC
Pan troglodytes
9598
panTro4
GRanges object from UCSC track 'Chimp mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro4/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro4/database/mrna
UCSC track
Spliced ESTs
UCSC
Pan troglodytes
9598
panTro4
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro4/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro4/database/intronEst
UCSC track
Chimp ESTs
UCSC
Pan troglodytes
9598
panTro4
GRanges object from UCSC track 'Chimp ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro4/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro4/database/est
UCSC track
Other mRNAs
UCSC
Pan troglodytes
9598
panTro4
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro4/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro4/database/xenoMrna
UCSC track
CpG Islands
UCSC
Pan troglodytes
9598
panTro4
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro4/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro4/database/cpgIslandExt
UCSC track
Rhesus Chain/Net
UCSC
Pan troglodytes
9598
panTro4
GRanges object from UCSC track 'Rhesus Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetRheMac3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro4/database/chainNetRheMac3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro4/database/chainNetRheMac3
UCSC track
Mouse Chain/Net
UCSC
Pan troglodytes
9598
panTro4
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm10", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro4/database/chainNetMm10_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro4/database/chainNetMm10
UCSC track
RepeatMasker
UCSC
Pan troglodytes
9598
panTro4
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro4/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro4/database/rmsk
UCSC track
Interrupted Rpts
UCSC
Pan troglodytes
9598
panTro4
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro4/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro4/database/nestedRepeats
UCSC track
WM + SDust
UCSC
Pan troglodytes
9598
panTro4
GRanges object from UCSC track 'WM + SDust'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("windowmaskerSdust", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro4/database/windowmaskerSdust_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro4/database/windowmaskerSdust
UCSC track
Simple Repeats
UCSC
Pan troglodytes
9598
panTro4
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro4/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro4/database/simpleRepeat
UCSC track
Assembly
UCSC
Pan troglodytes
9598
panTro3
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro3/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro3/database/gold
UCSC track
Scaffolds
UCSC
Pan troglodytes
9598
panTro3
GRanges object from UCSC track 'Scaffolds'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ctgPos2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro3/database/ctgPos2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro3/database/ctgPos2
UCSC track
Gap
UCSC
Pan troglodytes
9598
panTro3
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro3/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro3/database/gap
UCSC track
RefSeq Genes
UCSC
Pan troglodytes
9598
panTro3
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro3/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro3/database/refGene
UCSC track
Other RefSeq
UCSC
Pan troglodytes
9598
panTro3
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro3/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro3/database/xenoRefGene
UCSC track
N-SCAN
UCSC
Pan troglodytes
9598
panTro3
GRanges object from UCSC track 'N-SCAN'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nscanGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro3/database/nscanGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro3/database/nscanGene
UCSC track
tRNA Genes
UCSC
Pan troglodytes
9598
panTro3
GRanges object from UCSC track 'tRNA Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro3/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro3/database/tRNAs
UCSC track
Chimp mRNAs
UCSC
Pan troglodytes
9598
panTro3
GRanges object from UCSC track 'Chimp mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro3/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro3/database/mrna
UCSC track
Spliced ESTs
UCSC
Pan troglodytes
9598
panTro3
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro3/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro3/database/intronEst
UCSC track
Chimp ESTs
UCSC
Pan troglodytes
9598
panTro3
GRanges object from UCSC track 'Chimp ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro3/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro3/database/est
UCSC track
CpG Islands
UCSC
Pan troglodytes
9598
panTro3
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro3/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro3/database/cpgIslandExt
UCSC track
Zebrafish Chain/Net
UCSC
Pan troglodytes
9598
panTro3
GRanges object from UCSC track 'Zebrafish Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetDanRer7", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro3/database/chainNetDanRer7_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro3/database/chainNetDanRer7
UCSC track
Chicken Chain/Net
UCSC
Pan troglodytes
9598
panTro3
GRanges object from UCSC track 'Chicken Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetGalGal3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro3/database/chainNetGalGal3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro3/database/chainNetGalGal3
UCSC track
Human Chain/Net
UCSC
Pan troglodytes
9598
panTro3
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg19", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro3/database/chainNetHg19_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro3/database/chainNetHg19
UCSC track
Mouse Chain/Net
UCSC
Pan troglodytes
9598
panTro3
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro3/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro3/database/chainNetMm9
UCSC track
RepeatMasker
UCSC
Pan troglodytes
9598
panTro3
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro3/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro3/database/rmsk
UCSC track
Interrupted Rpts
UCSC
Pan troglodytes
9598
panTro3
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro3/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro3/database/nestedRepeats
UCSC track
Simple Repeats
UCSC
Pan troglodytes
9598
panTro3
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro3/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro3/database/simpleRepeat
UCSC track
Assembly
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/gold
UCSC track
Gap
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/gap
UCSC track
RefSeq Genes
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/refGene
UCSC track
Other RefSeq
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/xenoRefGene
UCSC track
Ensembl Genes
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/ensGene
UCSC track
N-SCAN
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'N-SCAN'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nscanGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/nscanGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/nscanGene
UCSC track
Genscan Genes
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/genscan
UCSC track
tRNA Genes
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'tRNA Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/tRNAs
UCSC track
Chimp mRNAs
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'Chimp mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/mrna
UCSC track
Spliced ESTs
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/intronEst
UCSC track
Chimp ESTs
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'Chimp ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/est
UCSC track
Other mRNAs
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/xenoMrna
UCSC track
CpG Islands
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/cpgIslandExt
UCSC track
NHGRI BiP
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'NHGRI BiP'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeNhgriBip", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/wgEncodeNhgriBip_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/wgEncodeNhgriBip
UCSC track
Human Chain/Net
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg19", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/chainNetHg19_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/chainNetHg19
UCSC track
Rhesus Chain/Net
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'Rhesus Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetRheMac2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/chainNetRheMac2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/chainNetRheMac2
UCSC track
Marmoset Chain/Net
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'Marmoset Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCalJac3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/chainNetCalJac3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/chainNetCalJac3
UCSC track
Rat Chain/Net
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'Rat Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetRn4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/chainNetRn4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/chainNetRn4
UCSC track
Mouse Chain/Net
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/chainNetMm9
UCSC track
Dog Chain/Net
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'Dog Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCanFam2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/chainNetCanFam2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/chainNetCanFam2
UCSC track
Horse Chain/Net
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'Horse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetEquCab1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/chainNetEquCab1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/chainNetEquCab1
UCSC track
Chicken Chain/Net
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'Chicken Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetGalGal2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/chainNetGalGal2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/chainNetGalGal2
UCSC track
Zebrafish Chain/Net
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'Zebrafish Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetDanRer4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/chainNetDanRer4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/chainNetDanRer4
UCSC track
Neandertal Seq
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'Neandertal Seq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ntSeqReads", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/ntSeqReads_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/ntSeqReads
UCSC track
RepeatMasker
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/rmsk
UCSC track
Simple Repeats
UCSC
Pan troglodytes
9598
panTro2
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro2/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro2/database/simpleRepeat
UCSC track
Contigs
UCSC
Pan troglodytes
9598
panTro1
GRanges object from UCSC track 'Contigs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ctgPos", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro1/database/ctgPos_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro1/database/ctgPos
UCSC track
Scaffolds
UCSC
Pan troglodytes
9598
panTro1
GRanges object from UCSC track 'Scaffolds'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro1/database/gold
UCSC track
Gap
UCSC
Pan troglodytes
9598
panTro1
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro1/database/gap
UCSC track
BAC End Pairs
UCSC
Pan troglodytes
9598
panTro1
GRanges object from UCSC track 'BAC End Pairs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("bacEndPairs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro1/database/bacEndPairs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro1/database/bacEndPairs
UCSC track
RefSeq Genes
UCSC
Pan troglodytes
9598
panTro1
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro1/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro1/database/refGene
UCSC track
Other RefSeq
UCSC
Pan troglodytes
9598
panTro1
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro1/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro1/database/xenoRefGene
UCSC track
Ensembl Genes
UCSC
Pan troglodytes
9598
panTro1
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro1/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro1/database/ensGene
UCSC track
Twinscan
UCSC
Pan troglodytes
9598
panTro1
GRanges object from UCSC track 'Twinscan'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("twinscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro1/database/twinscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro1/database/twinscan
UCSC track
Geneid Genes
UCSC
Pan troglodytes
9598
panTro1
GRanges object from UCSC track 'Geneid Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("geneid", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro1/database/geneid_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro1/database/geneid
UCSC track
Genscan Genes
UCSC
Pan troglodytes
9598
panTro1
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro1/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro1/database/genscan
UCSC track
Chimp mRNAs
UCSC
Pan troglodytes
9598
panTro1
GRanges object from UCSC track 'Chimp mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro1/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro1/database/mrna
UCSC track
Spliced ESTs
UCSC
Pan troglodytes
9598
panTro1
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro1/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro1/database/intronEst
UCSC track
Chimp ESTs
UCSC
Pan troglodytes
9598
panTro1
GRanges object from UCSC track 'Chimp ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro1/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro1/database/est
UCSC track
CpG Islands
UCSC
Pan troglodytes
9598
panTro1
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIsland", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro1/database/cpgIsland_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro1/database/cpgIsland
UCSC track
Fugu Blat
UCSC
Pan troglodytes
9598
panTro1
GRanges object from UCSC track 'Fugu Blat'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("blatFr1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro1/database/blatFr1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro1/database/blatFr1
UCSC track
Human Best
UCSC
Pan troglodytes
9598
panTro1
GRanges object from UCSC track 'Human Best'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("axtNetHg16", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro1/database/axtNetHg16_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro1/database/axtNetHg16
UCSC track
Human Deletions
UCSC
Pan troglodytes
9598
panTro1
GRanges object from UCSC track 'Human Deletions'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("humanDels", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro1/database/humanDels_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro1/database/humanDels
UCSC track
Mouse Chain/Net
UCSC
Pan troglodytes
9598
panTro1
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm8", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro1/database/chainNetMm8_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro1/database/chainNetMm8
UCSC track
SNPs
UCSC
Pan troglodytes
9598
panTro1
GRanges object from UCSC track 'SNPs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("snp125", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro1/database/snp125_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro1/database/snp125
UCSC track
RepeatMasker
UCSC
Pan troglodytes
9598
panTro1
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro1/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro1/database/rmsk
UCSC track
Assembly
UCSC
Bos taurus
9913
bosTau7
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau7/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau7/database/gold
UCSC track
Scaffolds
UCSC
Bos taurus
9913
bosTau7
GRanges object from UCSC track 'Scaffolds'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ctgPos2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau7/database/ctgPos2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau7/database/ctgPos2
UCSC track
Gap
UCSC
Bos taurus
9913
bosTau7
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau7/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau7/database/gap
UCSC track
RefSeq Genes
UCSC
Bos taurus
9913
bosTau7
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau7/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau7/database/refGene
UCSC track
Genscan Genes
UCSC
Bos taurus
9913
bosTau7
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau7/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau7/database/genscan
UCSC track
Cow mRNAs
UCSC
Bos taurus
9913
bosTau7
GRanges object from UCSC track 'Cow mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau7/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau7/database/mrna
UCSC track
Spliced ESTs
UCSC
Bos taurus
9913
bosTau7
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau7/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau7/database/intronEst
UCSC track
Cow ESTs
UCSC
Bos taurus
9913
bosTau7
GRanges object from UCSC track 'Cow ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau7/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau7/database/est
UCSC track
CpG Islands
UCSC
Bos taurus
9913
bosTau7
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau7/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau7/database/cpgIslandExt
UCSC track
Rat Chain/Net
UCSC
Bos taurus
9913
bosTau7
GRanges object from UCSC track 'Rat Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetRn4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau7/database/chainNetRn4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau7/database/chainNetRn4
UCSC track
Mouse Chain/Net
UCSC
Bos taurus
9913
bosTau7
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm10", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau7/database/chainNetMm10_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau7/database/chainNetMm10
UCSC track
Human Chain/Net
UCSC
Bos taurus
9913
bosTau7
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg19", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau7/database/chainNetHg19_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau7/database/chainNetHg19
UCSC track
Platypus Chain/Net
UCSC
Bos taurus
9913
bosTau7
GRanges object from UCSC track 'Platypus Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetOrnAna1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau7/database/chainNetOrnAna1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau7/database/chainNetOrnAna1
UCSC track
RepeatMasker
UCSC
Bos taurus
9913
bosTau7
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau7/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau7/database/rmsk
UCSC track
Interrupted Rpts
UCSC
Bos taurus
9913
bosTau7
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau7/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau7/database/nestedRepeats
UCSC track
Simple Repeats
UCSC
Bos taurus
9913
bosTau7
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau7/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau7/database/simpleRepeat
UCSC track
Assembly
UCSC
Bos taurus
9913
bosTau6
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau6/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau6/database/gold
UCSC track
Scaffolds
UCSC
Bos taurus
9913
bosTau6
GRanges object from UCSC track 'Scaffolds'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ctgPos2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau6/database/ctgPos2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau6/database/ctgPos2
UCSC track
Gap
UCSC
Bos taurus
9913
bosTau6
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau6/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau6/database/gap
UCSC track
RefSeq Genes
UCSC
Bos taurus
9913
bosTau6
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau6/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau6/database/refGene
UCSC track
Other RefSeq
UCSC
Bos taurus
9913
bosTau6
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau6/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau6/database/xenoRefGene
UCSC track
Ensembl Genes
UCSC
Bos taurus
9913
bosTau6
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau6/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau6/database/ensGene
UCSC track
tRNA Genes
UCSC
Bos taurus
9913
bosTau6
GRanges object from UCSC track 'tRNA Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau6/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau6/database/tRNAs
UCSC track
Cow mRNAs
UCSC
Bos taurus
9913
bosTau6
GRanges object from UCSC track 'Cow mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau6/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau6/database/mrna
UCSC track
Spliced ESTs
UCSC
Bos taurus
9913
bosTau6
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau6/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau6/database/intronEst
UCSC track
Cow ESTs
UCSC
Bos taurus
9913
bosTau6
GRanges object from UCSC track 'Cow ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau6/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau6/database/est
UCSC track
Other mRNAs
UCSC
Bos taurus
9913
bosTau6
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau6/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau6/database/xenoMrna
UCSC track
CpG Islands
UCSC
Bos taurus
9913
bosTau6
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau6/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau6/database/cpgIslandExt
UCSC track
Dog Chain/Net
UCSC
Bos taurus
9913
bosTau6
GRanges object from UCSC track 'Dog Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCanFam2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau6/database/chainNetCanFam2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau6/database/chainNetCanFam2
UCSC track
Rat Chain/Net
UCSC
Bos taurus
9913
bosTau6
GRanges object from UCSC track 'Rat Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetRn4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau6/database/chainNetRn4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau6/database/chainNetRn4
UCSC track
Mouse Chain/Net
UCSC
Bos taurus
9913
bosTau6
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau6/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau6/database/chainNetMm9
UCSC track
Human Chain/Net
UCSC
Bos taurus
9913
bosTau6
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg19", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau6/database/chainNetHg19_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau6/database/chainNetHg19
UCSC track
Opossum Chain/Net
UCSC
Bos taurus
9913
bosTau6
GRanges object from UCSC track 'Opossum Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMonDom5", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau6/database/chainNetMonDom5_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau6/database/chainNetMonDom5
UCSC track
Platypus Chain/Net
UCSC
Bos taurus
9913
bosTau6
GRanges object from UCSC track 'Platypus Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetOrnAna1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau6/database/chainNetOrnAna1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau6/database/chainNetOrnAna1
UCSC track
RepeatMasker
UCSC
Bos taurus
9913
bosTau6
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau6/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau6/database/rmsk
UCSC track
Interrupted Rpts
UCSC
Bos taurus
9913
bosTau6
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau6/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau6/database/nestedRepeats
UCSC track
Simple Repeats
UCSC
Bos taurus
9913
bosTau6
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau6/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau6/database/simpleRepeat
UCSC track
Assembly
UCSC
Bos taurus
9913
bosTau4
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau4/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau4/database/gold
UCSC track
Gap
UCSC
Bos taurus
9913
bosTau4
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau4/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau4/database/gap
UCSC track
RefSeq Genes
UCSC
Bos taurus
9913
bosTau4
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau4/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau4/database/refGene
UCSC track
Other RefSeq
UCSC
Bos taurus
9913
bosTau4
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau4/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau4/database/xenoRefGene
UCSC track
MGC Genes
UCSC
Bos taurus
9913
bosTau4
GRanges object from UCSC track 'MGC Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mgcFullMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau4/database/mgcFullMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau4/database/mgcFullMrna
UCSC track
Ensembl Genes
UCSC
Bos taurus
9913
bosTau4
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau4/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau4/database/ensGene
UCSC track
N-SCAN
UCSC
Bos taurus
9913
bosTau4
GRanges object from UCSC track 'N-SCAN'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nscanGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau4/database/nscanGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau4/database/nscanGene
UCSC track
Genscan Genes
UCSC
Bos taurus
9913
bosTau4
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau4/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau4/database/genscan
UCSC track
tRNA Genes
UCSC
Bos taurus
9913
bosTau4
GRanges object from UCSC track 'tRNA Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau4/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau4/database/tRNAs
UCSC track
Human Proteins
UCSC
Bos taurus
9913
bosTau4
GRanges object from UCSC track 'Human Proteins'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("blastHg18KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau4/database/blastHg18KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau4/database/blastHg18KG
UCSC track
Cow mRNAs
UCSC
Bos taurus
9913
bosTau4
GRanges object from UCSC track 'Cow mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau4/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau4/database/mrna
UCSC track
Spliced ESTs
UCSC
Bos taurus
9913
bosTau4
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau4/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau4/database/intronEst
UCSC track
Cow ESTs
UCSC
Bos taurus
9913
bosTau4
GRanges object from UCSC track 'Cow ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau4/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau4/database/est
UCSC track
Other mRNAs
UCSC
Bos taurus
9913
bosTau4
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau4/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau4/database/xenoMrna
UCSC track
CpG Islands
UCSC
Bos taurus
9913
bosTau4
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau4/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau4/database/cpgIslandExt
UCSC track
NHGRI BiP
UCSC
Bos taurus
9913
bosTau4
GRanges object from UCSC track 'NHGRI BiP'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeNhgriBip", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau4/database/wgEncodeNhgriBip_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau4/database/wgEncodeNhgriBip
UCSC track
Most Conserved
UCSC
Bos taurus
9913
bosTau4
GRanges object from UCSC track 'Most Conserved'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("phastConsElements5way", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau4/database/phastConsElements5way_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau4/database/phastConsElements5way
UCSC track
Dog Chain/Net
UCSC
Bos taurus
9913
bosTau4
GRanges object from UCSC track 'Dog Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCanFam2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau4/database/chainNetCanFam2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau4/database/chainNetCanFam2
UCSC track
Mouse Chain/Net
UCSC
Bos taurus
9913
bosTau4
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau4/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau4/database/chainNetMm9
UCSC track
RepeatMasker
UCSC
Bos taurus
9913
bosTau4
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau4/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau4/database/rmsk
UCSC track
Interrupted Rpts
UCSC
Bos taurus
9913
bosTau4
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau4/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau4/database/nestedRepeats
UCSC track
Simple Repeats
UCSC
Bos taurus
9913
bosTau4
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau4/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau4/database/simpleRepeat
UCSC track
Assembly
UCSC
Bos taurus
9913
bosTau3
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau3/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau3/database/gold
UCSC track
Gap
UCSC
Bos taurus
9913
bosTau3
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau3/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau3/database/gap
UCSC track
RefSeq Genes
UCSC
Bos taurus
9913
bosTau3
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau3/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau3/database/refGene
UCSC track
Other RefSeq
UCSC
Bos taurus
9913
bosTau3
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau3/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau3/database/xenoRefGene
UCSC track
MGC Genes
UCSC
Bos taurus
9913
bosTau3
GRanges object from UCSC track 'MGC Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mgcFullMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau3/database/mgcFullMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau3/database/mgcFullMrna
UCSC track
Ensembl Genes
UCSC
Bos taurus
9913
bosTau3
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau3/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau3/database/ensGene
UCSC track
SGP Genes
UCSC
Bos taurus
9913
bosTau3
GRanges object from UCSC track 'SGP Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("sgpGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau3/database/sgpGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau3/database/sgpGene
UCSC track
Geneid Genes
UCSC
Bos taurus
9913
bosTau3
GRanges object from UCSC track 'Geneid Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("geneid", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau3/database/geneid_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau3/database/geneid
UCSC track
Genscan Genes
UCSC
Bos taurus
9913
bosTau3
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau3/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau3/database/genscan
UCSC track
Human Proteins
UCSC
Bos taurus
9913
bosTau3
GRanges object from UCSC track 'Human Proteins'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("blastHg18KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau3/database/blastHg18KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau3/database/blastHg18KG
UCSC track
Cow mRNAs
UCSC
Bos taurus
9913
bosTau3
GRanges object from UCSC track 'Cow mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau3/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau3/database/mrna
UCSC track
Spliced ESTs
UCSC
Bos taurus
9913
bosTau3
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau3/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau3/database/intronEst
UCSC track
Cow ESTs
UCSC
Bos taurus
9913
bosTau3
GRanges object from UCSC track 'Cow ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau3/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau3/database/est
UCSC track
Other mRNAs
UCSC
Bos taurus
9913
bosTau3
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau3/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau3/database/xenoMrna
UCSC track
CpG Islands
UCSC
Bos taurus
9913
bosTau3
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau3/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau3/database/cpgIslandExt
UCSC track
Rat Chain/Net
UCSC
Bos taurus
9913
bosTau3
GRanges object from UCSC track 'Rat Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetRn4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau3/database/chainNetRn4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau3/database/chainNetRn4
UCSC track
Mouse Chain/Net
UCSC
Bos taurus
9913
bosTau3
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau3/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau3/database/chainNetMm9
UCSC track
Human Chain/Net
UCSC
Bos taurus
9913
bosTau3
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg18", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau3/database/chainNetHg18_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau3/database/chainNetHg18
UCSC track
SNPs (127)
UCSC
Bos taurus
9913
bosTau3
GRanges object from UCSC track 'SNPs (127)'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("snp127", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau3/database/snp127_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau3/database/snp127
UCSC track
RepeatMasker
UCSC
Bos taurus
9913
bosTau3
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau3/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau3/database/rmsk
UCSC track
Simple Repeats
UCSC
Bos taurus
9913
bosTau3
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau3/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau3/database/simpleRepeat
UCSC track
Assembly
UCSC
Bos taurus
9913
bosTau2
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau2/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau2/database/gold
UCSC track
Gap
UCSC
Bos taurus
9913
bosTau2
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau2/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau2/database/gap
UCSC track
RefSeq Genes
UCSC
Bos taurus
9913
bosTau2
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau2/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau2/database/refGene
UCSC track
Other RefSeq
UCSC
Bos taurus
9913
bosTau2
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau2/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau2/database/xenoRefGene
UCSC track
SGP Genes
UCSC
Bos taurus
9913
bosTau2
GRanges object from UCSC track 'SGP Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("sgpGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau2/database/sgpGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau2/database/sgpGene
UCSC track
Geneid Genes
UCSC
Bos taurus
9913
bosTau2
GRanges object from UCSC track 'Geneid Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("geneid", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau2/database/geneid_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau2/database/geneid
UCSC track
Genscan Genes
UCSC
Bos taurus
9913
bosTau2
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau2/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau2/database/genscan
UCSC track
Human Proteins
UCSC
Bos taurus
9913
bosTau2
GRanges object from UCSC track 'Human Proteins'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("blastHg18KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau2/database/blastHg18KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau2/database/blastHg18KG
UCSC track
Cow mRNAs
UCSC
Bos taurus
9913
bosTau2
GRanges object from UCSC track 'Cow mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau2/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau2/database/mrna
UCSC track
Spliced ESTs
UCSC
Bos taurus
9913
bosTau2
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau2/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau2/database/intronEst
UCSC track
Cow ESTs
UCSC
Bos taurus
9913
bosTau2
GRanges object from UCSC track 'Cow ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau2/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau2/database/est
UCSC track
CpG Islands
UCSC
Bos taurus
9913
bosTau2
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau2/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau2/database/cpgIslandExt
UCSC track
Rat Chain/Net
UCSC
Bos taurus
9913
bosTau2
GRanges object from UCSC track 'Rat Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetRn4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau2/database/chainNetRn4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau2/database/chainNetRn4
UCSC track
Mouse Chain/Net
UCSC
Bos taurus
9913
bosTau2
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm8", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau2/database/chainNetMm8_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau2/database/chainNetMm8
UCSC track
Human Chain/Net
UCSC
Bos taurus
9913
bosTau2
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg18", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau2/database/chainNetHg18_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau2/database/chainNetHg18
UCSC track
RepeatMasker
UCSC
Bos taurus
9913
bosTau2
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau2/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau2/database/rmsk
UCSC track
Simple Repeats
UCSC
Bos taurus
9913
bosTau2
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau2/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau2/database/simpleRepeat
UCSC track
Assembly
UCSC
Canis familiaris
9615
canFam3
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam3/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam3/database/gold
UCSC track
Gap
UCSC
Canis familiaris
9615
canFam3
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam3/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam3/database/gap
UCSC track
RefSeq Genes
UCSC
Canis familiaris
9615
canFam3
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam3/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam3/database/refGene
UCSC track
Other RefSeq
UCSC
Canis familiaris
9615
canFam3
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam3/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam3/database/xenoRefGene
UCSC track
Ensembl Genes
UCSC
Canis familiaris
9615
canFam3
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam3/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam3/database/ensGene
UCSC track
Genscan Genes
UCSC
Canis familiaris
9615
canFam3
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam3/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam3/database/genscan
UCSC track
Dog mRNAs
UCSC
Canis familiaris
9615
canFam3
GRanges object from UCSC track 'Dog mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam3/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam3/database/mrna
UCSC track
Spliced ESTs
UCSC
Canis familiaris
9615
canFam3
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam3/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam3/database/intronEst
UCSC track
Dog ESTs
UCSC
Canis familiaris
9615
canFam3
GRanges object from UCSC track 'Dog ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam3/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam3/database/est
UCSC track
Other mRNAs
UCSC
Canis familiaris
9615
canFam3
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam3/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam3/database/xenoMrna
UCSC track
CpG Islands
UCSC
Canis familiaris
9615
canFam3
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam3/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam3/database/cpgIslandExt
UCSC track
Mouse Chain/Net
UCSC
Canis familiaris
9615
canFam3
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm10", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam3/database/chainNetMm10_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam3/database/chainNetMm10
UCSC track
Human Chain/Net
UCSC
Canis familiaris
9615
canFam3
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg19", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam3/database/chainNetHg19_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam3/database/chainNetHg19
UCSC track
RepeatMasker
UCSC
Canis familiaris
9615
canFam3
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam3/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam3/database/rmsk
UCSC track
Interrupted Rpts
UCSC
Canis familiaris
9615
canFam3
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam3/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam3/database/nestedRepeats
UCSC track
Assembly
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/gold
UCSC track
Gap
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/gap
UCSC track
BAC End Pairs
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'BAC End Pairs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("bacEndPairs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/bacEndPairs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/bacEndPairs
UCSC track
Uncertified
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'Uncertified'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("uncertified", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/uncertified_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/uncertified
UCSC track
RefSeq Genes
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/refGene
UCSC track
Ensembl Genes
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/ensGene
UCSC track
N-SCAN
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'N-SCAN'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nscanGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/nscanGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/nscanGene
UCSC track
tRNA Genes
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'tRNA Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/tRNAs
UCSC track
Dog mRNAs
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'Dog mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/mrna
UCSC track
Spliced ESTs
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/intronEst
UCSC track
Dog ESTs
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'Dog ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/est
UCSC track
CpG Islands
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/cpgIslandExt
UCSC track
NHGRI BiP
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'NHGRI BiP'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeNhgriBip", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/wgEncodeNhgriBip_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/wgEncodeNhgriBip
UCSC track
Panda Chain/Net
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'Panda Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetAilMel1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/chainNetAilMel1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/chainNetAilMel1
UCSC track
Horse Chain/Net
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'Horse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetEquCab2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/chainNetEquCab2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/chainNetEquCab2
UCSC track
bosTau7 Chain/Net
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'bosTau7 Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetBosTau7", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/chainNetBosTau7_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/chainNetBosTau7
UCSC track
Rat Chain/Net
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'Rat Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetRn4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/chainNetRn4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/chainNetRn4
UCSC track
Mouse Chain/Net
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/chainNetMm9
UCSC track
Marmoset Chain/Net
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'Marmoset Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCalJac3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/chainNetCalJac3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/chainNetCalJac3
UCSC track
Cat Chain/Net
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'Cat Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetFelCat4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/chainNetFelCat4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/chainNetFelCat4
UCSC track
Chimp Chain/Net
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'Chimp Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetPanTro3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/chainNetPanTro3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/chainNetPanTro3
UCSC track
Human Chain/Net
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg19", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/chainNetHg19_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/chainNetHg19
UCSC track
Opossum Chain/Net
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'Opossum Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMonDom5", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/chainNetMonDom5_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/chainNetMonDom5
UCSC track
SNPs (131)
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'SNPs (131)'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("snp131", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/snp131_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/snp131
UCSC track
RepeatMasker
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/rmsk
UCSC track
Simple Repeats
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/simpleRepeat
UCSC track
Microsatellite
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'Microsatellite'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("microsat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/microsat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/microsat
UCSC track
Self Chain
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'Self Chain'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainSelf", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/chainSelf_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/chainSelf
UCSC track
Assembly
UCSC
Canis familiaris
9615
canFam1
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam1/database/gold
UCSC track
Gap
UCSC
Canis familiaris
9615
canFam1
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam1/database/gap
UCSC track
BAC End Pairs
UCSC
Canis familiaris
9615
canFam1
GRanges object from UCSC track 'BAC End Pairs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("bacEndPairs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam1/database/bacEndPairs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam1/database/bacEndPairs
UCSC track
RefSeq Genes
UCSC
Canis familiaris
9615
canFam1
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam1/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam1/database/refGene
UCSC track
Other RefSeq
UCSC
Canis familiaris
9615
canFam1
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam1/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam1/database/xenoRefGene
UCSC track
Ensembl Genes
UCSC
Canis familiaris
9615
canFam1
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam1/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam1/database/ensGene
UCSC track
Twinscan
UCSC
Canis familiaris
9615
canFam1
GRanges object from UCSC track 'Twinscan'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("twinscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam1/database/twinscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam1/database/twinscan
UCSC track
N-SCAN
UCSC
Canis familiaris
9615
canFam1
GRanges object from UCSC track 'N-SCAN'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nscanGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam1/database/nscanGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam1/database/nscanGene
UCSC track
Genscan Genes
UCSC
Canis familiaris
9615
canFam1
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam1/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam1/database/genscan
UCSC track
Dog mRNAs
UCSC
Canis familiaris
9615
canFam1
GRanges object from UCSC track 'Dog mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam1/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam1/database/mrna
UCSC track
Spliced ESTs
UCSC
Canis familiaris
9615
canFam1
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam1/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam1/database/intronEst
UCSC track
Dog ESTs
UCSC
Canis familiaris
9615
canFam1
GRanges object from UCSC track 'Dog ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam1/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam1/database/est
UCSC track
Fugu Blat
UCSC
Canis familiaris
9615
canFam1
GRanges object from UCSC track 'Fugu Blat'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("blatFr1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam1/database/blatFr1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam1/database/blatFr1
UCSC track
Mouse Chain/Net
UCSC
Canis familiaris
9615
canFam1
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm6", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam1/database/chainNetMm6_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam1/database/chainNetMm6
UCSC track
Human Chain/Net
UCSC
Canis familiaris
9615
canFam1
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg17", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam1/database/chainNetHg17_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam1/database/chainNetHg17
UCSC track
SNPs
UCSC
Canis familiaris
9615
canFam1
GRanges object from UCSC track 'SNPs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("snp125", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam1/database/snp125_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam1/database/snp125
UCSC track
Segmental Dups
UCSC
Canis familiaris
9615
canFam1
GRanges object from UCSC track 'Segmental Dups'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genomicSuperDups", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam1/database/genomicSuperDups_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam1/database/genomicSuperDups
UCSC track
RepeatMasker
UCSC
Canis familiaris
9615
canFam1
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam1/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam1/database/rmsk
UCSC track
Simple Repeats
UCSC
Canis familiaris
9615
canFam1
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam1/database/simpleRepeat
UCSC track
Microsatellite
UCSC
Canis familiaris
9615
canFam1
GRanges object from UCSC track 'Microsatellite'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("microsat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam1/database/microsat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam1/database/microsat
UCSC track
Assembly
UCSC
Tursiops truncatus
9739
turTru2
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/turTru2/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/turTru2/database/gold
UCSC track
Gap
UCSC
Tursiops truncatus
9739
turTru2
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/turTru2/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/turTru2/database/gap
UCSC track
Other RefSeq
UCSC
Tursiops truncatus
9739
turTru2
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/turTru2/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/turTru2/database/xenoRefGene
UCSC track
Genscan Genes
UCSC
Tursiops truncatus
9739
turTru2
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/turTru2/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/turTru2/database/genscan
UCSC track
CpG Islands
UCSC
Tursiops truncatus
9739
turTru2
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/turTru2/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/turTru2/database/cpgIslandExt
UCSC track
Mouse Chain/Net
UCSC
Tursiops truncatus
9739
turTru2
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm10", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/turTru2/database/chainNetMm10_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/turTru2/database/chainNetMm10
UCSC track
RepeatMasker
UCSC
Tursiops truncatus
9739
turTru2
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/turTru2/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/turTru2/database/rmsk
UCSC track
Assembly
UCSC
Loxodonta africana
9785
loxAfr3
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/loxAfr3/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/loxAfr3/database/gold
UCSC track
Gap
UCSC
Loxodonta africana
9785
loxAfr3
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/loxAfr3/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/loxAfr3/database/gap
UCSC track
Ensembl Genes
UCSC
Loxodonta africana
9785
loxAfr3
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/loxAfr3/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/loxAfr3/database/ensGene
UCSC track
tRNA Genes
UCSC
Loxodonta africana
9785
loxAfr3
GRanges object from UCSC track 'tRNA Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/loxAfr3/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/loxAfr3/database/tRNAs
UCSC track
Human Proteins
UCSC
Loxodonta africana
9785
loxAfr3
GRanges object from UCSC track 'Human Proteins'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("blastHg18KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/loxAfr3/database/blastHg18KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/loxAfr3/database/blastHg18KG
UCSC track
Elephant mRNAs
UCSC
Loxodonta africana
9785
loxAfr3
GRanges object from UCSC track 'Elephant mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/loxAfr3/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/loxAfr3/database/mrna
UCSC track
RepeatMasker
UCSC
Loxodonta africana
9785
loxAfr3
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/loxAfr3/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/loxAfr3/database/rmsk
UCSC track
Simple Repeats
UCSC
Loxodonta africana
9785
loxAfr3
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/loxAfr3/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/loxAfr3/database/simpleRepeat
UCSC track
Assembly
UCSC
Nomascus leucogenys
61853
nomLeu2
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/nomLeu2/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/nomLeu2/database/gold
UCSC track
Gap
UCSC
Nomascus leucogenys
61853
nomLeu2
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/nomLeu2/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/nomLeu2/database/gap
UCSC track
Other RefSeq
UCSC
Nomascus leucogenys
61853
nomLeu2
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/nomLeu2/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/nomLeu2/database/xenoRefGene
UCSC track
Genscan Genes
UCSC
Nomascus leucogenys
61853
nomLeu2
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/nomLeu2/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/nomLeu2/database/genscan
UCSC track
Other mRNAs
UCSC
Nomascus leucogenys
61853
nomLeu2
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/nomLeu2/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/nomLeu2/database/xenoMrna
UCSC track
CpG Islands
UCSC
Nomascus leucogenys
61853
nomLeu2
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/nomLeu2/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/nomLeu2/database/cpgIslandExt
UCSC track
Mouse Chain/Net
UCSC
Nomascus leucogenys
61853
nomLeu2
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm10", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/nomLeu2/database/chainNetMm10_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/nomLeu2/database/chainNetMm10
UCSC track
RepeatMasker
UCSC
Nomascus leucogenys
61853
nomLeu2
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/nomLeu2/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/nomLeu2/database/rmsk
UCSC track
Interrupted Rpts
UCSC
Nomascus leucogenys
61853
nomLeu2
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/nomLeu2/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/nomLeu2/database/nestedRepeats
UCSC track
Simple Repeats
UCSC
Nomascus leucogenys
61853
nomLeu2
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/nomLeu2/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/nomLeu2/database/simpleRepeat
UCSC track
Assembly
UCSC
Nomascus leucogenys
61853
nomLeu1
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/nomLeu1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/nomLeu1/database/gold
UCSC track
Gap
UCSC
Nomascus leucogenys
61853
nomLeu1
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/nomLeu1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/nomLeu1/database/gap
UCSC track
Other RefSeq
UCSC
Nomascus leucogenys
61853
nomLeu1
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/nomLeu1/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/nomLeu1/database/xenoRefGene
UCSC track
Ensembl Genes
UCSC
Nomascus leucogenys
61853
nomLeu1
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/nomLeu1/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/nomLeu1/database/ensGene
UCSC track
tRNA Genes
UCSC
Nomascus leucogenys
61853
nomLeu1
GRanges object from UCSC track 'tRNA Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/nomLeu1/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/nomLeu1/database/tRNAs
UCSC track
Gibbon mRNAs
UCSC
Nomascus leucogenys
61853
nomLeu1
GRanges object from UCSC track 'Gibbon mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/nomLeu1/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/nomLeu1/database/mrna
UCSC track
Other mRNAs
UCSC
Nomascus leucogenys
61853
nomLeu1
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/nomLeu1/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/nomLeu1/database/xenoMrna
UCSC track
Gorilla Chain/Net
UCSC
Nomascus leucogenys
61853
nomLeu1
GRanges object from UCSC track 'Gorilla Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetGorGor3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/nomLeu1/database/chainNetGorGor3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/nomLeu1/database/chainNetGorGor3
UCSC track
Human Chain/Net
UCSC
Nomascus leucogenys
61853
nomLeu1
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg19", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/nomLeu1/database/chainNetHg19_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/nomLeu1/database/chainNetHg19
UCSC track
Mouse Chain/Net
UCSC
Nomascus leucogenys
61853
nomLeu1
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm10", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/nomLeu1/database/chainNetMm10_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/nomLeu1/database/chainNetMm10
UCSC track
RepeatMasker
UCSC
Nomascus leucogenys
61853
nomLeu1
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/nomLeu1/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/nomLeu1/database/rmsk
UCSC track
Interrupted Rpts
UCSC
Nomascus leucogenys
61853
nomLeu1
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/nomLeu1/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/nomLeu1/database/nestedRepeats
UCSC track
Simple Repeats
UCSC
Nomascus leucogenys
61853
nomLeu1
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/nomLeu1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/nomLeu1/database/simpleRepeat
UCSC track
Assembly
UCSC
Gorilla gorilla
9593
gorGor3
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gorGor3/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gorGor3/database/gold
UCSC track
Gap
UCSC
Gorilla gorilla
9593
gorGor3
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gorGor3/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gorGor3/database/gap
UCSC track
Other RefSeq
UCSC
Gorilla gorilla
9593
gorGor3
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gorGor3/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gorGor3/database/xenoRefGene
UCSC track
Ensembl Genes
UCSC
Gorilla gorilla
9593
gorGor3
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gorGor3/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gorGor3/database/ensGene
UCSC track
tRNA Genes
UCSC
Gorilla gorilla
9593
gorGor3
GRanges object from UCSC track 'tRNA Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gorGor3/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gorGor3/database/tRNAs
UCSC track
Gorilla mRNAs
UCSC
Gorilla gorilla
9593
gorGor3
GRanges object from UCSC track 'Gorilla mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gorGor3/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gorGor3/database/mrna
UCSC track
Other mRNAs
UCSC
Gorilla gorilla
9593
gorGor3
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gorGor3/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gorGor3/database/xenoMrna
UCSC track
Chimp Chain/Net
UCSC
Gorilla gorilla
9593
gorGor3
GRanges object from UCSC track 'Chimp Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetPanTro3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gorGor3/database/chainNetPanTro3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gorGor3/database/chainNetPanTro3
UCSC track
Human Chain/Net
UCSC
Gorilla gorilla
9593
gorGor3
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg19", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gorGor3/database/chainNetHg19_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gorGor3/database/chainNetHg19
UCSC track
Orangutan Chain/Net
UCSC
Gorilla gorilla
9593
gorGor3
GRanges object from UCSC track 'Orangutan Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetPonAbe2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gorGor3/database/chainNetPonAbe2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gorGor3/database/chainNetPonAbe2
UCSC track
Gibbon Chain/Net
UCSC
Gorilla gorilla
9593
gorGor3
GRanges object from UCSC track 'Gibbon Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetNomLeu1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gorGor3/database/chainNetNomLeu1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gorGor3/database/chainNetNomLeu1
UCSC track
Baboon Chain/Net
UCSC
Gorilla gorilla
9593
gorGor3
GRanges object from UCSC track 'Baboon Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetPapHam1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gorGor3/database/chainNetPapHam1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gorGor3/database/chainNetPapHam1
UCSC track
Rhesus Chain/Net
UCSC
Gorilla gorilla
9593
gorGor3
GRanges object from UCSC track 'Rhesus Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetRheMac3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gorGor3/database/chainNetRheMac3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gorGor3/database/chainNetRheMac3
UCSC track
Marmoset Chain/Net
UCSC
Gorilla gorilla
9593
gorGor3
GRanges object from UCSC track 'Marmoset Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCalJac3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gorGor3/database/chainNetCalJac3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gorGor3/database/chainNetCalJac3
UCSC track
Tarsier Chain/Net
UCSC
Gorilla gorilla
9593
gorGor3
GRanges object from UCSC track 'Tarsier Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetTarSyr1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gorGor3/database/chainNetTarSyr1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gorGor3/database/chainNetTarSyr1
UCSC track
Mouse lemur Chain/Net
UCSC
Gorilla gorilla
9593
gorGor3
GRanges object from UCSC track 'Mouse lemur Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMicMur1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gorGor3/database/chainNetMicMur1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gorGor3/database/chainNetMicMur1
UCSC track
Mouse Chain/Net
UCSC
Gorilla gorilla
9593
gorGor3
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm10", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gorGor3/database/chainNetMm10_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gorGor3/database/chainNetMm10
UCSC track
RepeatMasker
UCSC
Gorilla gorilla
9593
gorGor3
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gorGor3/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gorGor3/database/rmsk
UCSC track
Interrupted Rpts
UCSC
Gorilla gorilla
9593
gorGor3
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gorGor3/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gorGor3/database/nestedRepeats
UCSC track
Simple Repeats
UCSC
Gorilla gorilla
9593
gorGor3
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gorGor3/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gorGor3/database/simpleRepeat
UCSC track
Assembly
UCSC
Cavia porcellus
10141
cavPor3
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cavPor3/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cavPor3/database/gold
UCSC track
Gap
UCSC
Cavia porcellus
10141
cavPor3
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cavPor3/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cavPor3/database/gap
UCSC track
RefSeq Genes
UCSC
Cavia porcellus
10141
cavPor3
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cavPor3/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cavPor3/database/refGene
UCSC track
tRNA Genes
UCSC
Cavia porcellus
10141
cavPor3
GRanges object from UCSC track 'tRNA Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cavPor3/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cavPor3/database/tRNAs
UCSC track
Guinea pig mRNAs
UCSC
Cavia porcellus
10141
cavPor3
GRanges object from UCSC track 'Guinea pig mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cavPor3/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cavPor3/database/mrna
UCSC track
Guinea pig ESTs
UCSC
Cavia porcellus
10141
cavPor3
GRanges object from UCSC track 'Guinea pig ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cavPor3/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cavPor3/database/est
UCSC track
Other mRNAs
UCSC
Cavia porcellus
10141
cavPor3
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cavPor3/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cavPor3/database/xenoMrna
UCSC track
Human Chain/Net
UCSC
Cavia porcellus
10141
cavPor3
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg19", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cavPor3/database/chainNetHg19_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cavPor3/database/chainNetHg19
UCSC track
RepeatMasker
UCSC
Cavia porcellus
10141
cavPor3
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cavPor3/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cavPor3/database/rmsk
UCSC track
Interrupted Rpts
UCSC
Cavia porcellus
10141
cavPor3
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cavPor3/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cavPor3/database/nestedRepeats
UCSC track
Simple Repeats
UCSC
Cavia porcellus
10141
cavPor3
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cavPor3/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cavPor3/database/simpleRepeat
UCSC track
Assembly
UCSC
Equus caballus
9796
equCab2
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab2/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab2/database/gold
UCSC track
Scaffolds
UCSC
Equus caballus
9796
equCab2
GRanges object from UCSC track 'Scaffolds'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ctgPos2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab2/database/ctgPos2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab2/database/ctgPos2
UCSC track
Gap
UCSC
Equus caballus
9796
equCab2
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab2/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab2/database/gap
UCSC track
RefSeq Genes
UCSC
Equus caballus
9796
equCab2
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab2/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab2/database/refGene
UCSC track
Other RefSeq
UCSC
Equus caballus
9796
equCab2
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab2/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab2/database/xenoRefGene
UCSC track
Ensembl Genes
UCSC
Equus caballus
9796
equCab2
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab2/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab2/database/ensGene
UCSC track
N-SCAN
UCSC
Equus caballus
9796
equCab2
GRanges object from UCSC track 'N-SCAN'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nscanGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab2/database/nscanGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab2/database/nscanGene
UCSC track
tRNA Genes
UCSC
Equus caballus
9796
equCab2
GRanges object from UCSC track 'tRNA Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab2/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab2/database/tRNAs
UCSC track
Human Proteins
UCSC
Equus caballus
9796
equCab2
GRanges object from UCSC track 'Human Proteins'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("blastHg18KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab2/database/blastHg18KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab2/database/blastHg18KG
UCSC track
Horse mRNAs
UCSC
Equus caballus
9796
equCab2
GRanges object from UCSC track 'Horse mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab2/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab2/database/mrna
UCSC track
Spliced ESTs
UCSC
Equus caballus
9796
equCab2
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab2/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab2/database/intronEst
UCSC track
Horse ESTs
UCSC
Equus caballus
9796
equCab2
GRanges object from UCSC track 'Horse ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab2/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab2/database/est
UCSC track
Dog Chain/Net
UCSC
Equus caballus
9796
equCab2
GRanges object from UCSC track 'Dog Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCanFam2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab2/database/chainNetCanFam2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab2/database/chainNetCanFam2
UCSC track
Sheep Chain/Net
UCSC
Equus caballus
9796
equCab2
GRanges object from UCSC track 'Sheep Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetOviAri1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab2/database/chainNetOviAri1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab2/database/chainNetOviAri1
UCSC track
Mouse Chain/Net
UCSC
Equus caballus
9796
equCab2
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab2/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab2/database/chainNetMm9
UCSC track
Chimp Chain/Net
UCSC
Equus caballus
9796
equCab2
GRanges object from UCSC track 'Chimp Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetPanTro3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab2/database/chainNetPanTro3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab2/database/chainNetPanTro3
UCSC track
Opossum Chain/Net
UCSC
Equus caballus
9796
equCab2
GRanges object from UCSC track 'Opossum Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMonDom5", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab2/database/chainNetMonDom5_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab2/database/chainNetMonDom5
UCSC track
Platypus Chain/Net
UCSC
Equus caballus
9796
equCab2
GRanges object from UCSC track 'Platypus Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetOrnAna1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab2/database/chainNetOrnAna1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab2/database/chainNetOrnAna1
UCSC track
Chicken Chain/Net
UCSC
Equus caballus
9796
equCab2
GRanges object from UCSC track 'Chicken Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetGalGal3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab2/database/chainNetGalGal3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab2/database/chainNetGalGal3
UCSC track
RepeatMasker
UCSC
Equus caballus
9796
equCab2
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab2/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab2/database/rmsk
UCSC track
Interrupted Rpts
UCSC
Equus caballus
9796
equCab2
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab2/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab2/database/nestedRepeats
UCSC track
Simple Repeats
UCSC
Equus caballus
9796
equCab2
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab2/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab2/database/simpleRepeat
UCSC track
Assembly
UCSC
Equus caballus
9796
equCab1
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab1/database/gold
UCSC track
Gap
UCSC
Equus caballus
9796
equCab1
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab1/database/gap
UCSC track
RefSeq Genes
UCSC
Equus caballus
9796
equCab1
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab1/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab1/database/refGene
UCSC track
Other RefSeq
UCSC
Equus caballus
9796
equCab1
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab1/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab1/database/xenoRefGene
UCSC track
N-SCAN
UCSC
Equus caballus
9796
equCab1
GRanges object from UCSC track 'N-SCAN'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nscanGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab1/database/nscanGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab1/database/nscanGene
UCSC track
SGP Genes
UCSC
Equus caballus
9796
equCab1
GRanges object from UCSC track 'SGP Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("sgpGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab1/database/sgpGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab1/database/sgpGene
UCSC track
Geneid Genes
UCSC
Equus caballus
9796
equCab1
GRanges object from UCSC track 'Geneid Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("geneid", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab1/database/geneid_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab1/database/geneid
UCSC track
tRNA Genes
UCSC
Equus caballus
9796
equCab1
GRanges object from UCSC track 'tRNA Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab1/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab1/database/tRNAs
UCSC track
Human Proteins
UCSC
Equus caballus
9796
equCab1
GRanges object from UCSC track 'Human Proteins'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("blastHg18KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab1/database/blastHg18KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab1/database/blastHg18KG
UCSC track
Horse mRNAs
UCSC
Equus caballus
9796
equCab1
GRanges object from UCSC track 'Horse mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab1/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab1/database/mrna
UCSC track
Spliced ESTs
UCSC
Equus caballus
9796
equCab1
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab1/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab1/database/intronEst
UCSC track
Horse ESTs
UCSC
Equus caballus
9796
equCab1
GRanges object from UCSC track 'Horse ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab1/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab1/database/est
UCSC track
Other mRNAs
UCSC
Equus caballus
9796
equCab1
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab1/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab1/database/xenoMrna
UCSC track
Dog Chain/Net
UCSC
Equus caballus
9796
equCab1
GRanges object from UCSC track 'Dog Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCanFam2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab1/database/chainNetCanFam2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab1/database/chainNetCanFam2
UCSC track
Rat Chain/Net
UCSC
Equus caballus
9796
equCab1
GRanges object from UCSC track 'Rat Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetRn4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab1/database/chainNetRn4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab1/database/chainNetRn4
UCSC track
Mouse Chain/Net
UCSC
Equus caballus
9796
equCab1
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab1/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab1/database/chainNetMm9
UCSC track
Chimp Chain/Net
UCSC
Equus caballus
9796
equCab1
GRanges object from UCSC track 'Chimp Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetPanTro2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab1/database/chainNetPanTro2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab1/database/chainNetPanTro2
UCSC track
Human Chain/Net
UCSC
Equus caballus
9796
equCab1
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg18", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab1/database/chainNetHg18_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab1/database/chainNetHg18
UCSC track
Assembly
UCSC
Dipodomys ordii
10020
dipOrd1
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dipOrd1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dipOrd1/database/gold
UCSC track
Gap
UCSC
Dipodomys ordii
10020
dipOrd1
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dipOrd1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dipOrd1/database/gap
UCSC track
Other RefSeq
UCSC
Dipodomys ordii
10020
dipOrd1
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dipOrd1/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dipOrd1/database/xenoRefGene
UCSC track
Kangaroo rat mRNAs
UCSC
Dipodomys ordii
10020
dipOrd1
GRanges object from UCSC track 'Kangaroo rat mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dipOrd1/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dipOrd1/database/mrna
UCSC track
Other mRNAs
UCSC
Dipodomys ordii
10020
dipOrd1
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dipOrd1/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dipOrd1/database/xenoMrna
UCSC track
RepeatMasker
UCSC
Dipodomys ordii
10020
dipOrd1
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dipOrd1/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dipOrd1/database/rmsk
UCSC track
Interrupted Rpts
UCSC
Dipodomys ordii
10020
dipOrd1
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dipOrd1/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dipOrd1/database/nestedRepeats
UCSC track
Simple Repeats
UCSC
Dipodomys ordii
10020
dipOrd1
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dipOrd1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dipOrd1/database/simpleRepeat
UCSC track
Assembly
UCSC
Trichechus manatus
9778
triMan1
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/triMan1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/triMan1/database/gold
UCSC track
Gap
UCSC
Trichechus manatus
9778
triMan1
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/triMan1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/triMan1/database/gap
UCSC track
Other RefSeq
UCSC
Trichechus manatus
9778
triMan1
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/triMan1/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/triMan1/database/xenoRefGene
UCSC track
Manatee mRNAs
UCSC
Trichechus manatus
9778
triMan1
GRanges object from UCSC track 'Manatee mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/triMan1/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/triMan1/database/mrna
UCSC track
Other mRNAs
UCSC
Trichechus manatus
9778
triMan1
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/triMan1/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/triMan1/database/xenoMrna
UCSC track
CpG Islands
UCSC
Trichechus manatus
9778
triMan1
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/triMan1/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/triMan1/database/cpgIslandExt
UCSC track
RepeatMasker
UCSC
Trichechus manatus
9778
triMan1
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/triMan1/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/triMan1/database/rmsk
UCSC track
Interrupted Rpts
UCSC
Trichechus manatus
9778
triMan1
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/triMan1/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/triMan1/database/nestedRepeats
UCSC track
WM + SDust
UCSC
Trichechus manatus
9778
triMan1
GRanges object from UCSC track 'WM + SDust'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("windowmaskerSdust", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/triMan1/database/windowmaskerSdust_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/triMan1/database/windowmaskerSdust
UCSC track
Assembly
UCSC
Callithrix jacchus
9483
calJac3
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac3/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac3/database/gold
UCSC track
Scaffolds
UCSC
Callithrix jacchus
9483
calJac3
GRanges object from UCSC track 'Scaffolds'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ctgPos2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac3/database/ctgPos2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac3/database/ctgPos2
UCSC track
Gap
UCSC
Callithrix jacchus
9483
calJac3
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac3/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac3/database/gap
UCSC track
Quality Scores
UCSC
Callithrix jacchus
9483
calJac3
GRanges object from UCSC track 'Quality Scores'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("qualityBw", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac3/database/qualityBw_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac3/database/qualityBw
UCSC track
Bac Ends
UCSC
Callithrix jacchus
9483
calJac3
GRanges object from UCSC track 'Bac Ends'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("bacEnds", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac3/database/bacEnds_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac3/database/bacEnds
UCSC track
Bac End Singles
UCSC
Callithrix jacchus
9483
calJac3
GRanges object from UCSC track 'Bac End Singles'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("bacEndCalJac3Singles", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac3/database/bacEndCalJac3Singles_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac3/database/bacEndCalJac3Singles
UCSC track
Other RefSeq
UCSC
Callithrix jacchus
9483
calJac3
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac3/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac3/database/xenoRefGene
UCSC track
Ensembl Genes
UCSC
Callithrix jacchus
9483
calJac3
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac3/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac3/database/ensGene
UCSC track
N-SCAN
UCSC
Callithrix jacchus
9483
calJac3
GRanges object from UCSC track 'N-SCAN'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nscanGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac3/database/nscanGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac3/database/nscanGene
UCSC track
Marmoset mRNAs
UCSC
Callithrix jacchus
9483
calJac3
GRanges object from UCSC track 'Marmoset mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac3/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac3/database/mrna
UCSC track
Spliced ESTs
UCSC
Callithrix jacchus
9483
calJac3
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac3/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac3/database/intronEst
UCSC track
Marmoset ESTs
UCSC
Callithrix jacchus
9483
calJac3
GRanges object from UCSC track 'Marmoset ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac3/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac3/database/est
UCSC track
CpG Islands
UCSC
Callithrix jacchus
9483
calJac3
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac3/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac3/database/cpgIslandExt
UCSC track
Baboon Chain/Net
UCSC
Callithrix jacchus
9483
calJac3
GRanges object from UCSC track 'Baboon Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetPapHam1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac3/database/chainNetPapHam1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac3/database/chainNetPapHam1
UCSC track
Orangutan Chain/Net
UCSC
Callithrix jacchus
9483
calJac3
GRanges object from UCSC track 'Orangutan Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetPonAbe2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac3/database/chainNetPonAbe2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac3/database/chainNetPonAbe2
UCSC track
Gorilla Chain/Net
UCSC
Callithrix jacchus
9483
calJac3
GRanges object from UCSC track 'Gorilla Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetGorGor3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac3/database/chainNetGorGor3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac3/database/chainNetGorGor3
UCSC track
Chimp Chain/Net
UCSC
Callithrix jacchus
9483
calJac3
GRanges object from UCSC track 'Chimp Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetPanTro3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac3/database/chainNetPanTro3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac3/database/chainNetPanTro3
UCSC track
Mouse lemur Chain/Net
UCSC
Callithrix jacchus
9483
calJac3
GRanges object from UCSC track 'Mouse lemur Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMicMur1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac3/database/chainNetMicMur1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac3/database/chainNetMicMur1
UCSC track
Mouse Chain/Net
UCSC
Callithrix jacchus
9483
calJac3
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac3/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac3/database/chainNetMm9
UCSC track
Mouse Chain/Net
UCSC
Callithrix jacchus
9483
calJac3
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm10", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac3/database/chainNetMm10_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac3/database/chainNetMm10
UCSC track
Opossum Chain/Net
UCSC
Callithrix jacchus
9483
calJac3
GRanges object from UCSC track 'Opossum Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMonDom5", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac3/database/chainNetMonDom5_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac3/database/chainNetMonDom5
UCSC track
RepeatMasker
UCSC
Callithrix jacchus
9483
calJac3
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac3/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac3/database/rmsk
UCSC track
Interrupted Rpts
UCSC
Callithrix jacchus
9483
calJac3
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac3/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac3/database/nestedRepeats
UCSC track
Assembly
UCSC
Callithrix jacchus
9483
calJac1
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac1/database/gold
UCSC track
Gap
UCSC
Callithrix jacchus
9483
calJac1
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac1/database/gap
UCSC track
RefSeq Genes
UCSC
Callithrix jacchus
9483
calJac1
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac1/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac1/database/refGene
UCSC track
Other RefSeq
UCSC
Callithrix jacchus
9483
calJac1
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac1/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac1/database/xenoRefGene
UCSC track
N-SCAN
UCSC
Callithrix jacchus
9483
calJac1
GRanges object from UCSC track 'N-SCAN'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nscanGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac1/database/nscanGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac1/database/nscanGene
UCSC track
Marmoset mRNAs
UCSC
Callithrix jacchus
9483
calJac1
GRanges object from UCSC track 'Marmoset mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac1/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac1/database/mrna
UCSC track
Spliced ESTs
UCSC
Callithrix jacchus
9483
calJac1
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac1/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac1/database/intronEst
UCSC track
Marmoset ESTs
UCSC
Callithrix jacchus
9483
calJac1
GRanges object from UCSC track 'Marmoset ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac1/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac1/database/est
UCSC track
Most Conserved
UCSC
Callithrix jacchus
9483
calJac1
GRanges object from UCSC track 'Most Conserved'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("phastConsElements9way", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac1/database/phastConsElements9way_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac1/database/phastConsElements9way
UCSC track
Chimp Chain/Net
UCSC
Callithrix jacchus
9483
calJac1
GRanges object from UCSC track 'Chimp Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetPanTro2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac1/database/chainNetPanTro2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac1/database/chainNetPanTro2
UCSC track
RepeatMasker
UCSC
Callithrix jacchus
9483
calJac1
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac1/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac1/database/rmsk
UCSC track
Assembly
UCSC
Pteropus vampyrus
132908
pteVam1
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/pteVam1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/pteVam1/database/gold
UCSC track
Gap
UCSC
Pteropus vampyrus
132908
pteVam1
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/pteVam1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/pteVam1/database/gap
UCSC track
Other RefSeq
UCSC
Pteropus vampyrus
132908
pteVam1
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/pteVam1/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/pteVam1/database/xenoRefGene
UCSC track
Ensembl Genes
UCSC
Pteropus vampyrus
132908
pteVam1
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/pteVam1/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/pteVam1/database/ensGene
UCSC track
Megabat mRNAs
UCSC
Pteropus vampyrus
132908
pteVam1
GRanges object from UCSC track 'Megabat mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/pteVam1/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/pteVam1/database/mrna
UCSC track
CpG Islands
UCSC
Pteropus vampyrus
132908
pteVam1
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/pteVam1/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/pteVam1/database/cpgIslandExt
UCSC track
Mouse Chain/Net
UCSC
Pteropus vampyrus
132908
pteVam1
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm10", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/pteVam1/database/chainNetMm10_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/pteVam1/database/chainNetMm10
UCSC track
Interrupted Rpts
UCSC
Pteropus vampyrus
132908
pteVam1
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/pteVam1/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/pteVam1/database/nestedRepeats
UCSC track
WM + SDust
UCSC
Pteropus vampyrus
132908
pteVam1
GRanges object from UCSC track 'WM + SDust'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("windowmaskerSdust", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/pteVam1/database/windowmaskerSdust_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/pteVam1/database/windowmaskerSdust
UCSC track
Simple Repeats
UCSC
Pteropus vampyrus
132908
pteVam1
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/pteVam1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/pteVam1/database/simpleRepeat
UCSC track
Gap
UCSC
Myotis lucifugus
59463
myoLuc2
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/myoLuc2/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/myoLuc2/database/gap
UCSC track
Other RefSeq
UCSC
Myotis lucifugus
59463
myoLuc2
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/myoLuc2/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/myoLuc2/database/xenoRefGene
UCSC track
Human Proteins
UCSC
Myotis lucifugus
59463
myoLuc2
GRanges object from UCSC track 'Human Proteins'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("blastHg18KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/myoLuc2/database/blastHg18KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/myoLuc2/database/blastHg18KG
UCSC track
Microbat mRNAs
UCSC
Myotis lucifugus
59463
myoLuc2
GRanges object from UCSC track 'Microbat mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/myoLuc2/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/myoLuc2/database/mrna
UCSC track
Other mRNAs
UCSC
Myotis lucifugus
59463
myoLuc2
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/myoLuc2/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/myoLuc2/database/xenoMrna
UCSC track
RepeatMasker
UCSC
Myotis lucifugus
59463
myoLuc2
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/myoLuc2/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/myoLuc2/database/rmsk
UCSC track
Interrupted Rpts
UCSC
Myotis lucifugus
59463
myoLuc2
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/myoLuc2/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/myoLuc2/database/nestedRepeats
UCSC track
Simple Repeats
UCSC
Myotis lucifugus
59463
myoLuc2
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/myoLuc2/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/myoLuc2/database/simpleRepeat
UCSC track
Contigs
UCSC
Mus musculus
10090
mm10
GRanges object from UCSC track 'Contigs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("assemblyFrags", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm10/database/assemblyFrags_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm10/database/assemblyFrags
UCSC track
Assembly
UCSC
Mus musculus
10090
mm10
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm10/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm10/database/gold
UCSC track
Gap
UCSC
Mus musculus
10090
mm10
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm10/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm10/database/gap
UCSC track
GRC Incident
UCSC
Mus musculus
10090
mm10
GRanges object from UCSC track 'GRC Incident'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("grcIncidentDb", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm10/database/grcIncidentDb_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm10/database/grcIncidentDb
UCSC track
UCSC Genes
UCSC
Mus musculus
10090
mm10
GRanges object from UCSC track 'UCSC Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("knownGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm10/database/knownGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm10/database/knownGene
UCSC track
Alt Events
UCSC
Mus musculus
10090
mm10
GRanges object from UCSC track 'Alt Events'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("knownAlt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm10/database/knownAlt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm10/database/knownAlt
UCSC track
RefSeq Genes
UCSC
Mus musculus
10090
mm10
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm10/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm10/database/refGene
UCSC track
Other RefSeq
UCSC
Mus musculus
10090
mm10
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm10/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm10/database/xenoRefGene
UCSC track
MGC Genes
UCSC
Mus musculus
10090
mm10
GRanges object from UCSC track 'MGC Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mgcFullMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm10/database/mgcFullMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm10/database/mgcFullMrna
UCSC track
Ensembl Genes
UCSC
Mus musculus
10090
mm10
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm10/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm10/database/ensGene
UCSC track
Genscan Genes
UCSC
Mus musculus
10090
mm10
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm10/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm10/database/genscan
UCSC track
tRNA Genes
UCSC
Mus musculus
10090
mm10
GRanges object from UCSC track 'tRNA Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm10/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm10/database/tRNAs
UCSC track
Spliced ESTs
UCSC
Mus musculus
10090
mm10
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm10/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm10/database/intronEst
UCSC track
Mouse ESTs
UCSC
Mus musculus
10090
mm10
GRanges object from UCSC track 'Mouse ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm10/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm10/database/est
UCSC track
qPCR Primers
UCSC
Mus musculus
10090
mm10
GRanges object from UCSC track 'qPCR Primers'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("qPcrPrimers", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm10/database/qPcrPrimers_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm10/database/qPcrPrimers
UCSC track
Glires Chain/Net
UCSC
Mus musculus
10090
mm10
GRanges object from UCSC track 'Glires Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gliresChainNet", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm10/database/gliresChainNet_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm10/database/gliresChainNet
UCSC track
Placental Chain/Net
UCSC
Mus musculus
10090
mm10
GRanges object from UCSC track 'Placental Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("placentalChainNet", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm10/database/placentalChainNet_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm10/database/placentalChainNet
UCSC track
Vertebrate Chain/Net
UCSC
Mus musculus
10090
mm10
GRanges object from UCSC track 'Vertebrate Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("vertebrateChainNet", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm10/database/vertebrateChainNet_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm10/database/vertebrateChainNet
UCSC track
RepeatMasker
UCSC
Mus musculus
10090
mm10
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm10/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm10/database/rmsk
UCSC track
WM + SDust
UCSC
Mus musculus
10090
mm10
GRanges object from UCSC track 'WM + SDust'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("windowmaskerSdust", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm10/database/windowmaskerSdust_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm10/database/windowmaskerSdust
UCSC track
Simple Repeats
UCSC
Mus musculus
10090
mm10
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm10/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm10/database/simpleRepeat
UCSC track
Microsatellite
UCSC
Mus musculus
10090
mm10
GRanges object from UCSC track 'Microsatellite'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("microsat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm10/database/microsat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm10/database/microsat
UCSC track
STS Markers
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'STS Markers'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("stsMapMouseNew", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/stsMapMouseNew_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/stsMapMouseNew
UCSC track
Map Contigs
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Map Contigs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ctgPos", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/ctgPos_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/ctgPos
UCSC track
Assembly
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/gold
UCSC track
Publications
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Publications'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("pubs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/pubs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/pubs
UCSC track
BAC End Pairs
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'BAC End Pairs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("bacEndPairs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/bacEndPairs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/bacEndPairs
UCSC track
MGI QTL
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'MGI QTL'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("jaxQtl", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/jaxQtl_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/jaxQtl
UCSC track
GRC Incident
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'GRC Incident'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("grcIncidentDb", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/grcIncidentDb_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/grcIncidentDb
UCSC track
Wiki Track
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Wiki Track'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wikiTrack", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/wikiTrack_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/wikiTrack
UCSC track
Old UCSC Genes
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Old UCSC Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("knownGeneOld4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/knownGeneOld4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/knownGeneOld4
UCSC track
Alt Events
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Alt Events'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("knownAlt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/knownAlt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/knownAlt
UCSC track
CCDS
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'CCDS'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ccdsGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/ccdsGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/ccdsGene
UCSC track
Other RefSeq
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/xenoRefGene
UCSC track
MGC Genes
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'MGC Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mgcFullMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/mgcFullMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/mgcFullMrna
UCSC track
ORFeome Clones
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'ORFeome Clones'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("orfeomeMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/orfeomeMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/orfeomeMrna
UCSC track
Ensembl Genes
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/ensGene
UCSC track
AceView Genes
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'AceView Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("acembly", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/acembly_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/acembly
UCSC track
N-SCAN
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'N-SCAN'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nscanGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/nscanGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/nscanGene
UCSC track
Geneid Genes
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Geneid Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("geneid", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/geneid_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/geneid
UCSC track
Genscan Genes
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/genscan
UCSC track
Exoniphy
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Exoniphy'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("exoniphy", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/exoniphy_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/exoniphy
UCSC track
tRNA Genes
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'tRNA Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/tRNAs
UCSC track
NIA Gene Index
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'NIA Gene Index'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("NIAGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/NIAGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/NIAGene
UCSC track
miRNA
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'miRNA'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("miRNA", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/miRNA_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/miRNA
UCSC track
IKMC Genes
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'IKMC Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ikmc", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/ikmc_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/ikmc
UCSC track
Transcriptome
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Transcriptome'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("transcriptome", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/transcriptome_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/transcriptome
UCSC track
Human Proteins
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Human Proteins'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("blastHg18KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/blastHg18KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/blastHg18KG
UCSC track
Spliced ESTs
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/intronEst
UCSC track
Mouse ESTs
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Mouse ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/est
UCSC track
Other mRNAs
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/xenoMrna
UCSC track
MGI RepTranscrpt
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'MGI RepTranscrpt'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("jaxRepTranscript", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/jaxRepTranscript_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/jaxRepTranscript
UCSC track
MGI Phenotype
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'MGI Phenotype'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("jaxPhenotype", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/jaxPhenotype_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/jaxPhenotype
UCSC track
MGI Gene Trap
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'MGI Gene Trap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("jaxGeneTrap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/jaxGeneTrap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/jaxGeneTrap
UCSC track
Allen Brain
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Allen Brain'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("allenBrainAli", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/allenBrainAli_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/allenBrainAli
UCSC track
GNF Atlas 2
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'GNF Atlas 2'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gnfAtlas2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/gnfAtlas2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/gnfAtlas2
UCSC track
GNF U74B
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'GNF U74B'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyGnfU74B", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/affyGnfU74B_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/affyGnfU74B
UCSC track
GNF U74C
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'GNF U74C'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyGnfU74C", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/affyGnfU74C_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/affyGnfU74C
UCSC track
Affy GNF1M
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Affy GNF1M'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyGnf1m", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/affyGnf1m_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/affyGnf1m
UCSC track
Affy MOE430
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Affy MOE430'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyMOE430", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/affyMOE430_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/affyMOE430
UCSC track
CpG Islands
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/cpgIslandExt
UCSC track
REST
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'REST'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rest", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/rest_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/rest
UCSC track
Caltech Histone
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Caltech Histone'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeCaltechHist", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/wgEncodeCaltechHist_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/wgEncodeCaltechHist
UCSC track
Caltech TFBS
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Caltech TFBS'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeCaltechTfbs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/wgEncodeCaltechTfbs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/wgEncodeCaltechTfbs
UCSC track
LICR Histone
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'LICR Histone'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeLicrHistone", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/wgEncodeLicrHistone_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/wgEncodeLicrHistone
UCSC track
NHGRI BiP
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'NHGRI BiP'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeNhgriBip", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/wgEncodeNhgriBip_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/wgEncodeNhgriBip
UCSC track
PSU DNaseI HS
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'PSU DNaseI HS'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodePsuDnase", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/wgEncodePsuDnase_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/wgEncodePsuDnase
UCSC track
PSU Histone
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'PSU Histone'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodePsuHistone", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/wgEncodePsuHistone_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/wgEncodePsuHistone
UCSC track
PSU TFBS
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'PSU TFBS'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodePsuTfbs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/wgEncodePsuTfbs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/wgEncodePsuTfbs
UCSC track
Stan/Yale Histone
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Stan/Yale Histone'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeSydhHist", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/wgEncodeSydhHist_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/wgEncodeSydhHist
UCSC track
TS miRNA sites
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'TS miRNA sites'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("targetScanS", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/targetScanS_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/targetScanS
UCSC track
UW DNaseI DGF
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'UW DNaseI DGF'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeUwDgf", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/wgEncodeUwDgf_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/wgEncodeUwDgf
UCSC track
UW DNaseI HS
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'UW DNaseI HS'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeUwDnase", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/wgEncodeUwDnase_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/wgEncodeUwDnase
UCSC track
GERP
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'GERP'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("allMm9RS_BW", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/allMm9RS_BW_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/allMm9RS_BW
UCSC track
Rat Chain/Net
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Rat Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetRn4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/chainNetRn4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/chainNetRn4
UCSC track
Rabbit Chain/Net
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Rabbit Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetOryCun2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/chainNetOryCun2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/chainNetOryCun2
UCSC track
Marmoset Chain/Net
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Marmoset Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCalJac3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/chainNetCalJac3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/chainNetCalJac3
UCSC track
Rhesus Chain/Net
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Rhesus Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetRheMac2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/chainNetRheMac2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/chainNetRheMac2
UCSC track
Chimp Chain/Net
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Chimp Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetPanTro3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/chainNetPanTro3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/chainNetPanTro3
UCSC track
Pig Chain/Net
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Pig Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetSusScr2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/chainNetSusScr2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/chainNetSusScr2
UCSC track
Human Chain/Net
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg19", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/chainNetHg19_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/chainNetHg19
UCSC track
Dog Chain/Net
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Dog Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCanFam2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/chainNetCanFam2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/chainNetCanFam2
UCSC track
Cat Chain/Net
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Cat Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetFelCat4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/chainNetFelCat4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/chainNetFelCat4
UCSC track
Horse Chain/Net
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Horse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetEquCab2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/chainNetEquCab2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/chainNetEquCab2
UCSC track
Sheep Chain/Net
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Sheep Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetOviAri1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/chainNetOviAri1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/chainNetOviAri1
UCSC track
Elephant Chain/Net
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Elephant Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetLoxAfr3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/chainNetLoxAfr3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/chainNetLoxAfr3
UCSC track
Opossum Chain/Net
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Opossum Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMonDom5", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/chainNetMonDom5_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/chainNetMonDom5
UCSC track
Lizard Chain/Net
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Lizard Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetAnoCar2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/chainNetAnoCar2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/chainNetAnoCar2
UCSC track
Chicken Chain/Net
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Chicken Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetGalGal3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/chainNetGalGal3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/chainNetGalGal3
UCSC track
Turkey Chain/Net
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Turkey Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMelGal1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/chainNetMelGal1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/chainNetMelGal1
UCSC track
Zebrafish Chain/Net
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Zebrafish Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetDanRer7", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/chainNetDanRer7_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/chainNetDanRer7
UCSC track
Medaka Chain/Net
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Medaka Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetOryLat2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/chainNetOryLat2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/chainNetOryLat2
UCSC track
Stickleback Chain/Net
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Stickleback Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetGasAcu1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/chainNetGasAcu1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/chainNetGasAcu1
UCSC track
Tetraodon Chain/Net
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Tetraodon Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetTetNig2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/chainNetTetNig2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/chainNetTetNig2
UCSC track
Lamprey Chain/Net
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Lamprey Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetPetMar1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/chainNetPetMar1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/chainNetPetMar1
UCSC track
Lancelet Chain/Net
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Lancelet Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetBraFlo1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/chainNetBraFlo1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/chainNetBraFlo1
UCSC track
Agilent CGH
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Agilent CGH'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genotypeArrays", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/genotypeArrays_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/genotypeArrays
UCSC track
Segmental Dups
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Segmental Dups'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genomicSuperDups", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/genomicSuperDups_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/genomicSuperDups
UCSC track
RepeatMasker
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/rmsk
UCSC track
Microsatellite
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'Microsatellite'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("microsat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/microsat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/microsat
UCSC track
NumtS Sequence
UCSC
Mus musculus
10090
mm9
GRanges object from UCSC track 'NumtS Sequence'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("numtSeq", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm9/database/numtSeq_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm9/database/numtSeq
UCSC track
Chromosome Band
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Chromosome Band'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cytoBand", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/cytoBand_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/cytoBand
UCSC track
Assembly
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/gold
UCSC track
Gap
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/gap
UCSC track
MGI QTL
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'MGI QTL'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("jaxQtl", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/jaxQtl_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/jaxQtl
UCSC track
CCDS
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'CCDS'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ccdsGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/ccdsGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/ccdsGene
UCSC track
RefSeq Genes
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/refGene
UCSC track
Other RefSeq
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/xenoRefGene
UCSC track
Ensembl Genes
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/ensGene
UCSC track
SIB Genes
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'SIB Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("sibGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/sibGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/sibGene
UCSC track
N-SCAN
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'N-SCAN'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nscanGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/nscanGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/nscanGene
UCSC track
SGP Genes
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'SGP Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("sgpGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/sgpGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/sgpGene
UCSC track
Geneid Genes
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Geneid Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("geneid", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/geneid_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/geneid
UCSC track
Genscan Genes
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/genscan
UCSC track
miRNA
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'miRNA'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("miRNA", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/miRNA_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/miRNA
UCSC track
Gene Trap
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Gene Trap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("igtc", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/igtc_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/igtc
UCSC track
Mouse mRNAs
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Mouse mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/mrna
UCSC track
Mouse ESTs
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Mouse ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/est
UCSC track
Other mRNAs
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/xenoMrna
UCSC track
SIB Alt-Splicing
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'SIB Alt-Splicing'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("sibTxGraph", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/sibTxGraph_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/sibTxGraph
UCSC track
MGI Phenotype
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'MGI Phenotype'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("jaxPhenotype", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/jaxPhenotype_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/jaxPhenotype
UCSC track
MGI Allele
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'MGI Allele'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("jaxAllele", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/jaxAllele_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/jaxAllele
UCSC track
Rinn Sex Exp
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Rinn Sex Exp'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rinnSex", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/rinnSex_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/rinnSex
UCSC track
GNF U74A
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'GNF U74A'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyGnfU74A", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/affyGnfU74A_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/affyGnfU74A
UCSC track
Affy GNF1M
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Affy GNF1M'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyGnf1m", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/affyGnf1m_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/affyGnf1m
UCSC track
Affy U74
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Affy U74'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyU74", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/affyU74_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/affyU74
UCSC track
Rhesus Chain/Net
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Rhesus Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetRheMac2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/chainNetRheMac2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/chainNetRheMac2
UCSC track
Dog Chain/Net
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Dog Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCanFam2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/chainNetCanFam2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/chainNetCanFam2
UCSC track
Cat Chain/Net
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Cat Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetFelCat3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/chainNetFelCat3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/chainNetFelCat3
UCSC track
Opossum Chain/Net
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Opossum Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMonDom4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/chainNetMonDom4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/chainNetMonDom4
UCSC track
Platypus Chain/Net
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Platypus Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetOrnAna1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/chainNetOrnAna1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/chainNetOrnAna1
UCSC track
Chicken Chain/Net
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Chicken Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetGalGal3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/chainNetGalGal3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/chainNetGalGal3
UCSC track
xenTro2 Chain/Net
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'xenTro2 Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetXenTro2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/chainNetXenTro2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/chainNetXenTro2
UCSC track
Zebrafish Chain/Net
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Zebrafish Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetDanRer4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/chainNetDanRer4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/chainNetDanRer4
UCSC track
Fugu Chain/Net
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Fugu Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetFr1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/chainNetFr1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/chainNetFr1
UCSC track
Tetraodon Chain/Net
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Tetraodon Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetTetNig1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/chainNetTetNig1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/chainNetTetNig1
UCSC track
SNPs (126)
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'SNPs (126)'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("snp126", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/snp126_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/snp126
UCSC track
RepeatMasker
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/rmsk
UCSC track
Simple Repeats
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/simpleRepeat
UCSC track
Microsatellite
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Microsatellite'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("microsat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/microsat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/microsat
UCSC track
STS Markers
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'STS Markers'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("stsMapMouseNew", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/stsMapMouseNew_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/stsMapMouseNew
UCSC track
Map Contigs
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'Map Contigs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ctgPos", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/ctgPos_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/ctgPos
UCSC track
Assembly
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/gold
UCSC track
BAC End Pairs
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'BAC End Pairs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("bacEndPairs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/bacEndPairs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/bacEndPairs
UCSC track
Known Genes
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'Known Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("knownGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/knownGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/knownGene
UCSC track
Other RefSeq
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/xenoRefGene
UCSC track
MGC Genes
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'MGC Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mgcFullMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/mgcFullMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/mgcFullMrna
UCSC track
Ensembl Genes
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/ensGene
UCSC track
Geneid Genes
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'Geneid Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("geneid", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/geneid_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/geneid
UCSC track
Genscan Genes
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/genscan
UCSC track
miRNA
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'miRNA'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("miRNA", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/miRNA_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/miRNA
UCSC track
Mouse mRNAs
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'Mouse mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/mrna
UCSC track
Spliced ESTs
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/intronEst
UCSC track
Riken CAGE TC
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'Riken CAGE TC'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rikenCageTc", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/rikenCageTc_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/rikenCageTc
UCSC track
Allen Brain
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'Allen Brain'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("allenBrainAli", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/allenBrainAli_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/allenBrainAli
UCSC track
Rinn Sex Exp
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'Rinn Sex Exp'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rinnSex", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/rinnSex_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/rinnSex
UCSC track
GNF U74A
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'GNF U74A'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyGnfU74A", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/affyGnfU74A_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/affyGnfU74A
UCSC track
GNF U74B
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'GNF U74B'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyGnfU74B", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/affyGnfU74B_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/affyGnfU74B
UCSC track
Affy GNF1M
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'Affy GNF1M'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyGnf1m", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/affyGnf1m_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/affyGnf1m
UCSC track
Affy U74
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'Affy U74'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyU74", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/affyU74_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/affyU74
UCSC track
Affy MOE430
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'Affy MOE430'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyMOE430", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/affyMOE430_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/affyMOE430
UCSC track
PicTar miRNA
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'PicTar miRNA'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("picTar", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/picTar_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/picTar
UCSC track
Rat Chain/Net
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'Rat Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetRn3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/chainNetRn3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/chainNetRn3
UCSC track
Human Chain/Net
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg18", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/chainNetHg18_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/chainNetHg18
UCSC track
Cow Chain/Net
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'Cow Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetBosTau2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/chainNetBosTau2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/chainNetBosTau2
UCSC track
X. tropicalis Chain/Net
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'X. tropicalis Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetXenTro1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/chainNetXenTro1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/chainNetXenTro1
UCSC track
Fugu Chain/Net
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'Fugu Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetFr1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/chainNetFr1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/chainNetFr1
UCSC track
RepeatMasker
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/rmsk
UCSC track
Microsatellite
UCSC
Mus musculus
10090
mm7
GRanges object from UCSC track 'Microsatellite'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("microsat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm7/database/microsat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm7/database/microsat
UCSC track
Gap
UCSC
Microcebus murinus
30608
micMur1
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/micMur1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/micMur1/database/gap
UCSC track
Other RefSeq
UCSC
Microcebus murinus
30608
micMur1
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/micMur1/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/micMur1/database/xenoRefGene
UCSC track
Genscan Genes
UCSC
Microcebus murinus
30608
micMur1
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/micMur1/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/micMur1/database/genscan
UCSC track
CpG Islands
UCSC
Microcebus murinus
30608
micMur1
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/micMur1/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/micMur1/database/cpgIslandExt
UCSC track
Marmoset Chain/Net
UCSC
Microcebus murinus
30608
micMur1
GRanges object from UCSC track 'Marmoset Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCalJac3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/micMur1/database/chainNetCalJac3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/micMur1/database/chainNetCalJac3
UCSC track
RepeatMasker
UCSC
Microcebus murinus
30608
micMur1
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/micMur1/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/micMur1/database/rmsk
UCSC track
Assembly
UCSC
Heterocephalus glaber
10181
hetGla2
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hetGla2/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hetGla2/database/gold
UCSC track
Genscan Genes
UCSC
Heterocephalus glaber
10181
hetGla2
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hetGla2/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hetGla2/database/genscan
UCSC track
CpG Islands
UCSC
Heterocephalus glaber
10181
hetGla2
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hetGla2/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hetGla2/database/cpgIslandExt
UCSC track
RepeatMasker
UCSC
Heterocephalus glaber
10181
hetGla2
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hetGla2/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hetGla2/database/rmsk
UCSC track
WM + SDust
UCSC
Heterocephalus glaber
10181
hetGla2
GRanges object from UCSC track 'WM + SDust'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("windowmaskerSdust", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hetGla2/database/windowmaskerSdust_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hetGla2/database/windowmaskerSdust
UCSC track
Assembly
UCSC
Heterocephalus glaber
10181
hetGla1
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hetGla1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hetGla1/database/gold
UCSC track
Genscan Genes
UCSC
Heterocephalus glaber
10181
hetGla1
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hetGla1/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hetGla1/database/genscan
UCSC track
Other mRNAs
UCSC
Heterocephalus glaber
10181
hetGla1
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hetGla1/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hetGla1/database/xenoMrna
UCSC track
Mouse Chain/Net
UCSC
Heterocephalus glaber
10181
hetGla1
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm10", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hetGla1/database/chainNetMm10_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hetGla1/database/chainNetMm10
UCSC track
Interrupted Rpts
UCSC
Heterocephalus glaber
10181
hetGla1
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hetGla1/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hetGla1/database/nestedRepeats
UCSC track
Simple Repeats
UCSC
Heterocephalus glaber
10181
hetGla1
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hetGla1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hetGla1/database/simpleRepeat
UCSC track
Gap
UCSC
Monodelphis domestica
13616
monDom5
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom5/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom5/database/gap
UCSC track
Other RefSeq
UCSC
Monodelphis domestica
13616
monDom5
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom5/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom5/database/xenoRefGene
UCSC track
N-SCAN
UCSC
Monodelphis domestica
13616
monDom5
GRanges object from UCSC track 'N-SCAN'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nscanGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom5/database/nscanGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom5/database/nscanGene
UCSC track
tRNA Genes
UCSC
Monodelphis domestica
13616
monDom5
GRanges object from UCSC track 'tRNA Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom5/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom5/database/tRNAs
UCSC track
Opossum mRNAs
UCSC
Monodelphis domestica
13616
monDom5
GRanges object from UCSC track 'Opossum mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom5/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom5/database/mrna
UCSC track
Opossum ESTs
UCSC
Monodelphis domestica
13616
monDom5
GRanges object from UCSC track 'Opossum ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom5/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom5/database/est
UCSC track
CpG Islands
UCSC
Monodelphis domestica
13616
monDom5
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom5/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom5/database/cpgIslandExt
UCSC track
Most Conserved
UCSC
Monodelphis domestica
13616
monDom5
GRanges object from UCSC track 'Most Conserved'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("phastConsElements9way", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom5/database/phastConsElements9way_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom5/database/phastConsElements9way
UCSC track
Sheep Chain/Net
UCSC
Monodelphis domestica
13616
monDom5
GRanges object from UCSC track 'Sheep Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetOviAri1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom5/database/chainNetOviAri1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom5/database/chainNetOviAri1
UCSC track
Panda Chain/Net
UCSC
Monodelphis domestica
13616
monDom5
GRanges object from UCSC track 'Panda Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetAilMel1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom5/database/chainNetAilMel1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom5/database/chainNetAilMel1
UCSC track
White rhinoceros Chain/Net
UCSC
Monodelphis domestica
13616
monDom5
GRanges object from UCSC track 'White rhinoceros Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCerSim1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom5/database/chainNetCerSim1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom5/database/chainNetCerSim1
UCSC track
Cow Chain/Net
UCSC
Monodelphis domestica
13616
monDom5
GRanges object from UCSC track 'Cow Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetBosTau7", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom5/database/chainNetBosTau7_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom5/database/chainNetBosTau7
UCSC track
Cat Chain/Net
UCSC
Monodelphis domestica
13616
monDom5
GRanges object from UCSC track 'Cat Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetFelCat4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom5/database/chainNetFelCat4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom5/database/chainNetFelCat4
UCSC track
Marmoset Chain/Net
UCSC
Monodelphis domestica
13616
monDom5
GRanges object from UCSC track 'Marmoset Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCalJac3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom5/database/chainNetCalJac3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom5/database/chainNetCalJac3
UCSC track
Orangutan Chain/Net
UCSC
Monodelphis domestica
13616
monDom5
GRanges object from UCSC track 'Orangutan Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetPonAbe2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom5/database/chainNetPonAbe2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom5/database/chainNetPonAbe2
UCSC track
Human Chain/Net
UCSC
Monodelphis domestica
13616
monDom5
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg19", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom5/database/chainNetHg19_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom5/database/chainNetHg19
UCSC track
Chicken Chain/Net
UCSC
Monodelphis domestica
13616
monDom5
GRanges object from UCSC track 'Chicken Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetGalGal3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom5/database/chainNetGalGal3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom5/database/chainNetGalGal3
UCSC track
X. tropicalis Chain/Net
UCSC
Monodelphis domestica
13616
monDom5
GRanges object from UCSC track 'X. tropicalis Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetXenTro3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom5/database/chainNetXenTro3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom5/database/chainNetXenTro3
UCSC track
Lamprey Chain/Net
UCSC
Monodelphis domestica
13616
monDom5
GRanges object from UCSC track 'Lamprey Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetPetMar2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom5/database/chainNetPetMar2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom5/database/chainNetPetMar2
UCSC track
Interrupted Rpts
UCSC
Monodelphis domestica
13616
monDom5
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom5/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom5/database/nestedRepeats
UCSC track
Simple Repeats
UCSC
Monodelphis domestica
13616
monDom5
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom5/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom5/database/simpleRepeat
UCSC track
Gap
UCSC
Monodelphis domestica
13616
monDom4
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom4/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom4/database/gap
UCSC track
Other RefSeq
UCSC
Monodelphis domestica
13616
monDom4
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom4/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom4/database/xenoRefGene
UCSC track
N-SCAN
UCSC
Monodelphis domestica
13616
monDom4
GRanges object from UCSC track 'N-SCAN'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nscanGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom4/database/nscanGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom4/database/nscanGene
UCSC track
Human Proteins
UCSC
Monodelphis domestica
13616
monDom4
GRanges object from UCSC track 'Human Proteins'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("blastHg18KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom4/database/blastHg18KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom4/database/blastHg18KG
UCSC track
Spliced ESTs
UCSC
Monodelphis domestica
13616
monDom4
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom4/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom4/database/intronEst
UCSC track
Other mRNAs
UCSC
Monodelphis domestica
13616
monDom4
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom4/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom4/database/xenoMrna
UCSC track
Guinea pig Chain/Net
UCSC
Monodelphis domestica
13616
monDom4
GRanges object from UCSC track 'Guinea pig Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCavPor3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom4/database/chainNetCavPor3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom4/database/chainNetCavPor3
UCSC track
Mouse Chain/Net
UCSC
Monodelphis domestica
13616
monDom4
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom4/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom4/database/chainNetMm9
UCSC track
Human Chain/Net
UCSC
Monodelphis domestica
13616
monDom4
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg18", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom4/database/chainNetHg18_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom4/database/chainNetHg18
UCSC track
Chicken Chain/Net
UCSC
Monodelphis domestica
13616
monDom4
GRanges object from UCSC track 'Chicken Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetGalGal3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom4/database/chainNetGalGal3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom4/database/chainNetGalGal3
UCSC track
Zebrafish Chain/Net
UCSC
Monodelphis domestica
13616
monDom4
GRanges object from UCSC track 'Zebrafish Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetDanRer4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom4/database/chainNetDanRer4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom4/database/chainNetDanRer4
UCSC track
Simple Repeats
UCSC
Monodelphis domestica
13616
monDom4
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom4/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom4/database/simpleRepeat
UCSC track
Gap
UCSC
Monodelphis domestica
13616
monDom1
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom1/database/gap
UCSC track
Other RefSeq
UCSC
Monodelphis domestica
13616
monDom1
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom1/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom1/database/xenoRefGene
UCSC track
Opossum mRNAs
UCSC
Monodelphis domestica
13616
monDom1
GRanges object from UCSC track 'Opossum mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom1/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom1/database/mrna
UCSC track
CpG Islands
UCSC
Monodelphis domestica
13616
monDom1
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom1/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom1/database/cpgIslandExt
UCSC track
Most Conserved
UCSC
Monodelphis domestica
13616
monDom1
GRanges object from UCSC track 'Most Conserved'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mostConserved", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom1/database/mostConserved_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom1/database/mostConserved
UCSC track
Human Chain/Net
UCSC
Monodelphis domestica
13616
monDom1
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg17", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom1/database/chainNetHg17_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom1/database/chainNetHg17
UCSC track
Simple Repeats
UCSC
Monodelphis domestica
13616
monDom1
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom1/database/simpleRepeat
UCSC track
Assembly
UCSC
Pongo abelii
9601
ponAbe2
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ponAbe2/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ponAbe2/database/gold
UCSC track
RefSeq Genes
UCSC
Pongo abelii
9601
ponAbe2
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ponAbe2/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ponAbe2/database/refGene
UCSC track
Ensembl Genes
UCSC
Pongo abelii
9601
ponAbe2
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ponAbe2/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ponAbe2/database/ensGene
UCSC track
Genscan Genes
UCSC
Pongo abelii
9601
ponAbe2
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ponAbe2/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ponAbe2/database/genscan
UCSC track
Orangutan mRNAs
UCSC
Pongo abelii
9601
ponAbe2
GRanges object from UCSC track 'Orangutan mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ponAbe2/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ponAbe2/database/mrna
UCSC track
Orangutan ESTs
UCSC
Pongo abelii
9601
ponAbe2
GRanges object from UCSC track 'Orangutan ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ponAbe2/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ponAbe2/database/est
UCSC track
Gorilla Chain/Net
UCSC
Pongo abelii
9601
ponAbe2
GRanges object from UCSC track 'Gorilla Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetGorGor3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ponAbe2/database/chainNetGorGor3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ponAbe2/database/chainNetGorGor3
UCSC track
Human Chain/Net
UCSC
Pongo abelii
9601
ponAbe2
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg19", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ponAbe2/database/chainNetHg19_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ponAbe2/database/chainNetHg19
UCSC track
Marmoset Chain/Net
UCSC
Pongo abelii
9601
ponAbe2
GRanges object from UCSC track 'Marmoset Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCalJac3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ponAbe2/database/chainNetCalJac3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ponAbe2/database/chainNetCalJac3
UCSC track
Mouse Chain/Net
UCSC
Pongo abelii
9601
ponAbe2
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm10", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ponAbe2/database/chainNetMm10_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ponAbe2/database/chainNetMm10
UCSC track
Platypus Chain/Net
UCSC
Pongo abelii
9601
ponAbe2
GRanges object from UCSC track 'Platypus Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetOrnAna1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ponAbe2/database/chainNetOrnAna1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ponAbe2/database/chainNetOrnAna1
UCSC track
Interrupted Rpts
UCSC
Pongo abelii
9601
ponAbe2
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ponAbe2/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ponAbe2/database/nestedRepeats
UCSC track
Assembly
UCSC
Ailuropoda melanoleuca
9646
ailMel1
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ailMel1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ailMel1/database/gold
UCSC track
Ensembl Genes
UCSC
Ailuropoda melanoleuca
9646
ailMel1
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ailMel1/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ailMel1/database/ensGene
UCSC track
Human Proteins
UCSC
Ailuropoda melanoleuca
9646
ailMel1
GRanges object from UCSC track 'Human Proteins'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("blastHg18KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ailMel1/database/blastHg18KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ailMel1/database/blastHg18KG
UCSC track
Panda ESTs
UCSC
Ailuropoda melanoleuca
9646
ailMel1
GRanges object from UCSC track 'Panda ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ailMel1/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ailMel1/database/est
UCSC track
Opossum Chain/Net
UCSC
Ailuropoda melanoleuca
9646
ailMel1
GRanges object from UCSC track 'Opossum Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMonDom5", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ailMel1/database/chainNetMonDom5_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ailMel1/database/chainNetMonDom5
UCSC track
Rat Chain/Net
UCSC
Ailuropoda melanoleuca
9646
ailMel1
GRanges object from UCSC track 'Rat Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetRn4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ailMel1/database/chainNetRn4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ailMel1/database/chainNetRn4
UCSC track
Cat Chain/Net
UCSC
Ailuropoda melanoleuca
9646
ailMel1
GRanges object from UCSC track 'Cat Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetFelCat4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ailMel1/database/chainNetFelCat4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ailMel1/database/chainNetFelCat4
UCSC track
RepeatMasker
UCSC
Ailuropoda melanoleuca
9646
ailMel1
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ailMel1/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ailMel1/database/rmsk
UCSC track
Simple Repeats
UCSC
Ailuropoda melanoleuca
9646
ailMel1
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ailMel1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ailMel1/database/simpleRepeat
UCSC track
Gap
UCSC
Sus scrofa
9823
susScr3
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/susScr3/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/susScr3/database/gap
UCSC track
RefSeq Genes
UCSC
Sus scrofa
9823
susScr3
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/susScr3/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/susScr3/database/refGene
UCSC track
Ensembl Genes
UCSC
Sus scrofa
9823
susScr3
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/susScr3/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/susScr3/database/ensGene
UCSC track
Pig mRNAs
UCSC
Sus scrofa
9823
susScr3
GRanges object from UCSC track 'Pig mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/susScr3/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/susScr3/database/mrna
UCSC track
Pig ESTs
UCSC
Sus scrofa
9823
susScr3
GRanges object from UCSC track 'Pig ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/susScr3/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/susScr3/database/est
UCSC track
CpG Islands
UCSC
Sus scrofa
9823
susScr3
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/susScr3/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/susScr3/database/cpgIslandExt
UCSC track
RepeatMasker
UCSC
Sus scrofa
9823
susScr3
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/susScr3/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/susScr3/database/rmsk
UCSC track
WM + SDust
UCSC
Sus scrofa
9823
susScr3
GRanges object from UCSC track 'WM + SDust'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("windowmaskerSdust", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/susScr3/database/windowmaskerSdust_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/susScr3/database/windowmaskerSdust
UCSC track
Assembly
UCSC
Sus scrofa
9823
susScr2
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/susScr2/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/susScr2/database/gold
UCSC track
Gap
UCSC
Sus scrofa
9823
susScr2
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/susScr2/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/susScr2/database/gap
UCSC track
Other RefSeq
UCSC
Sus scrofa
9823
susScr2
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/susScr2/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/susScr2/database/xenoRefGene
UCSC track
N-SCAN
UCSC
Sus scrofa
9823
susScr2
GRanges object from UCSC track 'N-SCAN'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nscanGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/susScr2/database/nscanGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/susScr2/database/nscanGene
UCSC track
Human Proteins
UCSC
Sus scrofa
9823
susScr2
GRanges object from UCSC track 'Human Proteins'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("blastHg18KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/susScr2/database/blastHg18KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/susScr2/database/blastHg18KG
UCSC track
Spliced ESTs
UCSC
Sus scrofa
9823
susScr2
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/susScr2/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/susScr2/database/intronEst
UCSC track
Other mRNAs
UCSC
Sus scrofa
9823
susScr2
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/susScr2/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/susScr2/database/xenoMrna
UCSC track
Mouse Chain/Net
UCSC
Sus scrofa
9823
susScr2
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/susScr2/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/susScr2/database/chainNetMm9
UCSC track
Human Chain/Net
UCSC
Sus scrofa
9823
susScr2
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg19", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/susScr2/database/chainNetHg19_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/susScr2/database/chainNetHg19
UCSC track
RepeatMasker
UCSC
Sus scrofa
9823
susScr2
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/susScr2/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/susScr2/database/rmsk
UCSC track
Simple Repeats
UCSC
Sus scrofa
9823
susScr2
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/susScr2/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/susScr2/database/simpleRepeat
UCSC track
Gap
UCSC
Ochotona princeps
9978
ochPri2
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ochPri2/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ochPri2/database/gap
UCSC track
Other RefSeq
UCSC
Ochotona princeps
9978
ochPri2
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ochPri2/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ochPri2/database/xenoRefGene
UCSC track
Genscan Genes
UCSC
Ochotona princeps
9978
ochPri2
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ochPri2/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ochPri2/database/genscan
UCSC track
CpG Islands
UCSC
Ochotona princeps
9978
ochPri2
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ochPri2/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ochPri2/database/cpgIslandExt
UCSC track
RepeatMasker
UCSC
Ochotona princeps
9978
ochPri2
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ochPri2/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ochPri2/database/rmsk
UCSC track
WM + SDust
UCSC
Ochotona princeps
9978
ochPri2
GRanges object from UCSC track 'WM + SDust'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("windowmaskerSdust", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ochPri2/database/windowmaskerSdust_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ochPri2/database/windowmaskerSdust
UCSC track
Assembly
UCSC
Ornithorhynchus anatinus
9258
ornAna1
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ornAna1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ornAna1/database/gold
UCSC track
WSSD Coverage
UCSC
Ornithorhynchus anatinus
9258
ornAna1
GRanges object from UCSC track 'WSSD Coverage'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wssdCoverage", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ornAna1/database/wssdCoverage_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ornAna1/database/wssdCoverage
UCSC track
tRNA Genes
UCSC
Ornithorhynchus anatinus
9258
ornAna1
GRanges object from UCSC track 'tRNA Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ornAna1/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ornAna1/database/tRNAs
UCSC track
Platypus mRNAs
UCSC
Ornithorhynchus anatinus
9258
ornAna1
GRanges object from UCSC track 'Platypus mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ornAna1/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ornAna1/database/mrna
UCSC track
Platypus ESTs
UCSC
Ornithorhynchus anatinus
9258
ornAna1
GRanges object from UCSC track 'Platypus ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ornAna1/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ornAna1/database/est
UCSC track
Mouse Chain/Net
UCSC
Ornithorhynchus anatinus
9258
ornAna1
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ornAna1/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ornAna1/database/chainNetMm9
UCSC track
Interrupted Rpts
UCSC
Ornithorhynchus anatinus
9258
ornAna1
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ornAna1/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ornAna1/database/nestedRepeats
UCSC track
Assembly
UCSC
Oryctolagus cuniculus
9986
oryCun2
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oryCun2/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oryCun2/database/gold
UCSC track
Gap
UCSC
Oryctolagus cuniculus
9986
oryCun2
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oryCun2/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oryCun2/database/gap
UCSC track
Other RefSeq
UCSC
Oryctolagus cuniculus
9986
oryCun2
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oryCun2/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oryCun2/database/xenoRefGene
UCSC track
tRNA Genes
UCSC
Oryctolagus cuniculus
9986
oryCun2
GRanges object from UCSC track 'tRNA Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oryCun2/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oryCun2/database/tRNAs
UCSC track
Rabbit mRNAs
UCSC
Oryctolagus cuniculus
9986
oryCun2
GRanges object from UCSC track 'Rabbit mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oryCun2/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oryCun2/database/mrna
UCSC track
Rabbit ESTs
UCSC
Oryctolagus cuniculus
9986
oryCun2
GRanges object from UCSC track 'Rabbit ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oryCun2/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oryCun2/database/est
UCSC track
Mouse Chain/Net
UCSC
Oryctolagus cuniculus
9986
oryCun2
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oryCun2/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oryCun2/database/chainNetMm9
UCSC track
RepeatMasker
UCSC
Oryctolagus cuniculus
9986
oryCun2
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oryCun2/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oryCun2/database/rmsk
UCSC track
Simple Repeats
UCSC
Oryctolagus cuniculus
9986
oryCun2
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oryCun2/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oryCun2/database/simpleRepeat
UCSC track
Gap
UCSC
Rattus norvegicus
10116
rn5
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn5/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn5/database/gap
UCSC track
RefSeq Genes
UCSC
Rattus norvegicus
10116
rn5
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn5/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn5/database/refGene
UCSC track
MGC Genes
UCSC
Rattus norvegicus
10116
rn5
GRanges object from UCSC track 'MGC Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mgcFullMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn5/database/mgcFullMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn5/database/mgcFullMrna
UCSC track
Rat mRNAs
UCSC
Rattus norvegicus
10116
rn5
GRanges object from UCSC track 'Rat mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn5/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn5/database/mrna
UCSC track
Rat ESTs
UCSC
Rattus norvegicus
10116
rn5
GRanges object from UCSC track 'Rat ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn5/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn5/database/est
UCSC track
CpG Islands
UCSC
Rattus norvegicus
10116
rn5
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn5/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn5/database/cpgIslandExt
UCSC track
Rhesus Chain/Net
UCSC
Rattus norvegicus
10116
rn5
GRanges object from UCSC track 'Rhesus Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetRheMac3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn5/database/chainNetRheMac3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn5/database/chainNetRheMac3
UCSC track
Interrupted Rpts
UCSC
Rattus norvegicus
10116
rn5
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn5/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn5/database/nestedRepeats
UCSC track
Simple Repeats
UCSC
Rattus norvegicus
10116
rn5
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn5/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn5/database/simpleRepeat
UCSC track
STS Markers
UCSC
Rattus norvegicus
10116
rn4
GRanges object from UCSC track 'STS Markers'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("stsMapRat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn4/database/stsMapRat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn4/database/stsMapRat
UCSC track
Gap
UCSC
Rattus norvegicus
10116
rn4
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn4/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn4/database/gap
UCSC track
BAC End Pairs
UCSC
Rattus norvegicus
10116
rn4
GRanges object from UCSC track 'BAC End Pairs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("bacEndPairs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn4/database/bacEndPairs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn4/database/bacEndPairs
UCSC track
RGD QTL
UCSC
Rattus norvegicus
10116
rn4
GRanges object from UCSC track 'RGD QTL'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rgdQtl", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn4/database/rgdQtl_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn4/database/rgdQtl
UCSC track
Old Known Genes
UCSC
Rattus norvegicus
10116
rn4
GRanges object from UCSC track 'Old Known Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("knownGenePrevious", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn4/database/knownGenePrevious_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn4/database/knownGenePrevious
UCSC track
Other RefSeq
UCSC
Rattus norvegicus
10116
rn4
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn4/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn4/database/xenoRefGene
UCSC track
Ensembl Genes
UCSC
Rattus norvegicus
10116
rn4
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn4/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn4/database/ensGene
UCSC track
CONTRAST
UCSC
Rattus norvegicus
10116
rn4
GRanges object from UCSC track 'CONTRAST'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("contrastGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn4/database/contrastGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn4/database/contrastGene
UCSC track
Geneid Genes
UCSC
Rattus norvegicus
10116
rn4
GRanges object from UCSC track 'Geneid Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("geneid", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn4/database/geneid_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn4/database/geneid
UCSC track
tRNA Genes
UCSC
Rattus norvegicus
10116
rn4
GRanges object from UCSC track 'tRNA Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn4/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn4/database/tRNAs
UCSC track
Rat mRNAs
UCSC
Rattus norvegicus
10116
rn4
GRanges object from UCSC track 'Rat mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn4/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn4/database/mrna
UCSC track
Rat ESTs
UCSC
Rattus norvegicus
10116
rn4
GRanges object from UCSC track 'Rat ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn4/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn4/database/est
UCSC track
Affy RG-U34A
UCSC
Rattus norvegicus
10116
rn4
GRanges object from UCSC track 'Affy RG-U34A'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyU34A", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn4/database/affyU34A_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn4/database/affyU34A
UCSC track
CpG Islands
UCSC
Rattus norvegicus
10116
rn4
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn4/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn4/database/cpgIslandExt
UCSC track
NHGRI BiP
UCSC
Rattus norvegicus
10116
rn4
GRanges object from UCSC track 'NHGRI BiP'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeNhgriBip", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn4/database/wgEncodeNhgriBip_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn4/database/wgEncodeNhgriBip
UCSC track
Most Conserved
UCSC
Rattus norvegicus
10116
rn4
GRanges object from UCSC track 'Most Conserved'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("phastConsElements9way", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn4/database/phastConsElements9way_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn4/database/phastConsElements9way
UCSC track
Guinea pig Chain/Net
UCSC
Rattus norvegicus
10116
rn4
GRanges object from UCSC track 'Guinea pig Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCavPor3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn4/database/chainNetCavPor3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn4/database/chainNetCavPor3
UCSC track
panTro2 Chain/Net
UCSC
Rattus norvegicus
10116
rn4
GRanges object from UCSC track 'panTro2 Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetPanTro2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn4/database/chainNetPanTro2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn4/database/chainNetPanTro2
UCSC track
Panda Chain/Net
UCSC
Rattus norvegicus
10116
rn4
GRanges object from UCSC track 'Panda Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetAilMel1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn4/database/chainNetAilMel1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn4/database/chainNetAilMel1
UCSC track
Horse Chain/Net
UCSC
Rattus norvegicus
10116
rn4
GRanges object from UCSC track 'Horse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetEquCab1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn4/database/chainNetEquCab1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn4/database/chainNetEquCab1
UCSC track
Opossum Chain/Net
UCSC
Rattus norvegicus
10116
rn4
GRanges object from UCSC track 'Opossum Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMonDom4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn4/database/chainNetMonDom4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn4/database/chainNetMonDom4
UCSC track
Turkey Chain/Net
UCSC
Rattus norvegicus
10116
rn4
GRanges object from UCSC track 'Turkey Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMelGal1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn4/database/chainNetMelGal1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn4/database/chainNetMelGal1
UCSC track
Zebrafish Chain/Net
UCSC
Rattus norvegicus
10116
rn4
GRanges object from UCSC track 'Zebrafish Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetDanRer4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn4/database/chainNetDanRer4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn4/database/chainNetDanRer4
UCSC track
Agilent CGH
UCSC
Rattus norvegicus
10116
rn4
GRanges object from UCSC track 'Agilent CGH'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genotypeArrays", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn4/database/genotypeArrays_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn4/database/genotypeArrays
UCSC track
Simple Repeats
UCSC
Rattus norvegicus
10116
rn4
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn4/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn4/database/simpleRepeat
UCSC track
Chromosome Band
UCSC
Rattus norvegicus
10116
rn3
GRanges object from UCSC track 'Chromosome Band'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cytoBand", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn3/database/cytoBand_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn3/database/cytoBand
UCSC track
Recomb Rate
UCSC
Rattus norvegicus
10116
rn3
GRanges object from UCSC track 'Recomb Rate'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("recombRateRat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn3/database/recombRateRat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn3/database/recombRateRat
UCSC track
Gap
UCSC
Rattus norvegicus
10116
rn3
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn3/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn3/database/gap
UCSC track
BAC End Pairs
UCSC
Rattus norvegicus
10116
rn3
GRanges object from UCSC track 'BAC End Pairs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("bacEndPairs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn3/database/bacEndPairs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn3/database/bacEndPairs
UCSC track
RGD QTL
UCSC
Rattus norvegicus
10116
rn3
GRanges object from UCSC track 'RGD QTL'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rgdQtl", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn3/database/rgdQtl_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn3/database/rgdQtl
UCSC track
RefSeq Genes
UCSC
Rattus norvegicus
10116
rn3
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn3/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn3/database/refGene
UCSC track
RGD Genes
UCSC
Rattus norvegicus
10116
rn3
GRanges object from UCSC track 'RGD Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rgdGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn3/database/rgdGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn3/database/rgdGene
UCSC track
Ensembl Genes
UCSC
Rattus norvegicus
10116
rn3
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn3/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn3/database/ensGene
UCSC track
N-SCAN
UCSC
Rattus norvegicus
10116
rn3
GRanges object from UCSC track 'N-SCAN'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nscanGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn3/database/nscanGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn3/database/nscanGene
UCSC track
Fgenesh++ Genes
UCSC
Rattus norvegicus
10116
rn3
GRanges object from UCSC track 'Fgenesh++ Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("softberryGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn3/database/softberryGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn3/database/softberryGene
UCSC track
Genscan Genes
UCSC
Rattus norvegicus
10116
rn3
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn3/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn3/database/genscan
UCSC track
Rat mRNAs
UCSC
Rattus norvegicus
10116
rn3
GRanges object from UCSC track 'Rat mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn3/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn3/database/mrna
UCSC track
Rat ESTs
UCSC
Rattus norvegicus
10116
rn3
GRanges object from UCSC track 'Rat ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn3/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn3/database/est
UCSC track
Other mRNAs
UCSC
Rattus norvegicus
10116
rn3
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn3/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn3/database/xenoMrna
UCSC track
GNF Atlas 2
UCSC
Rattus norvegicus
10116
rn3
GRanges object from UCSC track 'GNF Atlas 2'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gnfAtlas2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn3/database/gnfAtlas2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn3/database/gnfAtlas2
UCSC track
Affy RAE230
UCSC
Rattus norvegicus
10116
rn3
GRanges object from UCSC track 'Affy RAE230'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("affyRAE230", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn3/database/affyRAE230_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn3/database/affyRAE230
UCSC track
Fugu Ecores
UCSC
Rattus norvegicus
10116
rn3
GRanges object from UCSC track 'Fugu Ecores'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ecoresFr1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn3/database/ecoresFr1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn3/database/ecoresFr1
UCSC track
Dog Chain/Net
UCSC
Rattus norvegicus
10116
rn3
GRanges object from UCSC track 'Dog Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCanFam2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn3/database/chainNetCanFam2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn3/database/chainNetCanFam2
UCSC track
RGD SSLP
UCSC
Rattus norvegicus
10116
rn3
GRanges object from UCSC track 'RGD SSLP'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rgdSslp", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn3/database/rgdSslp_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn3/database/rgdSslp
UCSC track
RepeatMasker
UCSC
Rattus norvegicus
10116
rn3
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rn3/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rn3/database/rmsk
UCSC track
Assembly
UCSC
Macaca mulatta
9544
rheMac3
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rheMac3/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rheMac3/database/gold
UCSC track
Gap
UCSC
Macaca mulatta
9544
rheMac3
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rheMac3/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rheMac3/database/gap
UCSC track
RefSeq Genes
UCSC
Macaca mulatta
9544
rheMac3
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rheMac3/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rheMac3/database/refGene
UCSC track
Genscan Genes
UCSC
Macaca mulatta
9544
rheMac3
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rheMac3/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rheMac3/database/genscan
UCSC track
Spliced ESTs
UCSC
Macaca mulatta
9544
rheMac3
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rheMac3/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rheMac3/database/intronEst
UCSC track
Other mRNAs
UCSC
Macaca mulatta
9544
rheMac3
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rheMac3/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rheMac3/database/xenoMrna
UCSC track
Orangutan Chain/Net
UCSC
Macaca mulatta
9544
rheMac3
GRanges object from UCSC track 'Orangutan Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetPonAbe2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rheMac3/database/chainNetPonAbe2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rheMac3/database/chainNetPonAbe2
UCSC track
Chimp Chain/Net
UCSC
Macaca mulatta
9544
rheMac3
GRanges object from UCSC track 'Chimp Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetPanTro4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rheMac3/database/chainNetPanTro4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rheMac3/database/chainNetPanTro4
UCSC track
Marmoset Chain/Net
UCSC
Macaca mulatta
9544
rheMac3
GRanges object from UCSC track 'Marmoset Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCalJac3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rheMac3/database/chainNetCalJac3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rheMac3/database/chainNetCalJac3
UCSC track
Mouse Chain/Net
UCSC
Macaca mulatta
9544
rheMac3
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm10", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rheMac3/database/chainNetMm10_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rheMac3/database/chainNetMm10
UCSC track
RepeatMasker
UCSC
Macaca mulatta
9544
rheMac3
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rheMac3/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rheMac3/database/rmsk
UCSC track
Contigs
UCSC
Macaca mulatta
9544
rheMac2
GRanges object from UCSC track 'Contigs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ctgPos", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rheMac2/database/ctgPos_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rheMac2/database/ctgPos
UCSC track
Gap
UCSC
Macaca mulatta
9544
rheMac2
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rheMac2/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rheMac2/database/gap
UCSC track
RefSeq Genes
UCSC
Macaca mulatta
9544
rheMac2
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rheMac2/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rheMac2/database/refGene
UCSC track
Other RefSeq
UCSC
Macaca mulatta
9544
rheMac2
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rheMac2/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rheMac2/database/xenoRefGene
UCSC track
N-SCAN
UCSC
Macaca mulatta
9544
rheMac2
GRanges object from UCSC track 'N-SCAN'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nscanGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rheMac2/database/nscanGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rheMac2/database/nscanGene
UCSC track
Geneid Genes
UCSC
Macaca mulatta
9544
rheMac2
GRanges object from UCSC track 'Geneid Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("geneid", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rheMac2/database/geneid_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rheMac2/database/geneid
UCSC track
Rhesus mRNAs
UCSC
Macaca mulatta
9544
rheMac2
GRanges object from UCSC track 'Rhesus mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rheMac2/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rheMac2/database/mrna
UCSC track
Rhesus ESTs
UCSC
Macaca mulatta
9544
rheMac2
GRanges object from UCSC track 'Rhesus ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rheMac2/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rheMac2/database/est
UCSC track
NHGRI BiP
UCSC
Macaca mulatta
9544
rheMac2
GRanges object from UCSC track 'NHGRI BiP'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeNhgriBip", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rheMac2/database/wgEncodeNhgriBip_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rheMac2/database/wgEncodeNhgriBip
UCSC track
Gorilla Chain/Net
UCSC
Macaca mulatta
9544
rheMac2
GRanges object from UCSC track 'Gorilla Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetGorGor3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rheMac2/database/chainNetGorGor3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rheMac2/database/chainNetGorGor3
UCSC track
Human Chain/Net
UCSC
Macaca mulatta
9544
rheMac2
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg19", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rheMac2/database/chainNetHg19_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rheMac2/database/chainNetHg19
UCSC track
rn4 Chain/Net
UCSC
Macaca mulatta
9544
rheMac2
GRanges object from UCSC track 'rn4 Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetRn4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rheMac2/database/chainNetRn4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rheMac2/database/chainNetRn4
UCSC track
RepeatMasker
UCSC
Macaca mulatta
9544
rheMac2
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/rheMac2/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/rheMac2/database/rmsk
UCSC track
Assembly
UCSC
Procavia capensis
9813
proCap1
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/proCap1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/proCap1/database/gold
UCSC track
Ensembl Assembly
UCSC
Procavia capensis
9813
proCap1
GRanges object from UCSC track 'Ensembl Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensemblGeneScaffold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/proCap1/database/ensemblGeneScaffold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/proCap1/database/ensemblGeneScaffold
UCSC track
Ensembl Genes
UCSC
Procavia capensis
9813
proCap1
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/proCap1/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/proCap1/database/ensGene
UCSC track
CpG Islands
UCSC
Procavia capensis
9813
proCap1
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/proCap1/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/proCap1/database/cpgIslandExt
UCSC track
RepeatMasker
UCSC
Procavia capensis
9813
proCap1
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/proCap1/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/proCap1/database/rmsk
UCSC track
WM + SDust
UCSC
Procavia capensis
9813
proCap1
GRanges object from UCSC track 'WM + SDust'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("windowmaskerSdust", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/proCap1/database/windowmaskerSdust_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/proCap1/database/windowmaskerSdust
UCSC track
Assembly
UCSC
Ovis aries
9940
oviAri1
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oviAri1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oviAri1/database/gold
UCSC track
Gap
UCSC
Ovis aries
9940
oviAri1
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oviAri1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oviAri1/database/gap
UCSC track
RefSeq Genes
UCSC
Ovis aries
9940
oviAri1
GRanges object from UCSC track 'RefSeq Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oviAri1/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oviAri1/database/refGene
UCSC track
tRNA Genes
UCSC
Ovis aries
9940
oviAri1
GRanges object from UCSC track 'tRNA Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oviAri1/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oviAri1/database/tRNAs
UCSC track
Spliced ESTs
UCSC
Ovis aries
9940
oviAri1
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oviAri1/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oviAri1/database/intronEst
UCSC track
Other mRNAs
UCSC
Ovis aries
9940
oviAri1
GRanges object from UCSC track 'Other mRNAs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oviAri1/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oviAri1/database/xenoMrna
UCSC track
Mouse Chain/Net
UCSC
Ovis aries
9940
oviAri1
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oviAri1/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oviAri1/database/chainNetMm9
UCSC track
Opossum Chain/Net
UCSC
Ovis aries
9940
oviAri1
GRanges object from UCSC track 'Opossum Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMonDom5", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oviAri1/database/chainNetMonDom5_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oviAri1/database/chainNetMonDom5
UCSC track
Interrupted Rpts
UCSC
Ovis aries
9940
oviAri1
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oviAri1/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oviAri1/database/nestedRepeats
UCSC track
Assembly
UCSC
Sorex araneus
42254
sorAra1
GRanges object from UCSC track 'Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/sorAra1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/sorAra1/database/gold
UCSC track
Ensembl Assembly
UCSC
Sorex araneus
42254
sorAra1
GRanges object from UCSC track 'Ensembl Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensemblGeneScaffold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/sorAra1/database/ensemblGeneScaffold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/sorAra1/database/ensemblGeneScaffold
UCSC track
Ensembl Genes
UCSC
Sorex araneus
42254
sorAra1
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/sorAra1/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/sorAra1/database/ensGene
UCSC track
Mouse Chain/Net
UCSC
Sorex araneus
42254
sorAra1
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm10", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/sorAra1/database/chainNetMm10_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/sorAra1/database/chainNetMm10
UCSC track
Interrupted Rpts
UCSC
Sorex araneus
42254
sorAra1
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/sorAra1/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/sorAra1/database/nestedRepeats
UCSC track
Simple Repeats
UCSC
Sorex araneus
42254
sorAra1
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/sorAra1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/sorAra1/database/simpleRepeat
UCSC track
Gap
UCSC
Homo sapiens
9606
hg19
GRanges object from UCSC track 'Gap'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg19/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/gap
UCSC track
Affy RNA Loc
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Affy RNA Loc'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wgEncodeAffyRnaChip", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/wgEncodeAffyRnaChip_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/wgEncodeAffyRnaChip
UCSC track
Burge RNA-seq
UCSC
Homo sapiens
9606
hg18
GRanges object from UCSC track 'Burge RNA-seq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("burgeRnaSeqGemMapperAlign", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/hg18/database/burgeRnaSeqGemMapperAlign_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/hg18/database/burgeRnaSeqGemMapperAlign
UCSC track
Gorilla Chain/Net
UCSC
Pan troglodytes
9598
panTro3
GRanges object from UCSC track 'Gorilla Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetGorGor3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro3/database/chainNetGorGor3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro3/database/chainNetGorGor3
UCSC track
Orangutan Chain/Net
UCSC
Pan troglodytes
9598
panTro3
GRanges object from UCSC track 'Orangutan Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetPonAbe2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro3/database/chainNetPonAbe2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro3/database/chainNetPonAbe2
UCSC track
Horse Chain/Net
UCSC
Pan troglodytes
9598
panTro3
GRanges object from UCSC track 'Horse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetEquCab2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro3/database/chainNetEquCab2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro3/database/chainNetEquCab2
UCSC track
Rhesus Chain/Net
UCSC
Pan troglodytes
9598
panTro3
GRanges object from UCSC track 'Rhesus Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetRheMac2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro3/database/chainNetRheMac2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro3/database/chainNetRheMac2
UCSC track
Marmoset Chain/Net
UCSC
Pan troglodytes
9598
panTro3
GRanges object from UCSC track 'Marmoset Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCalJac3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro3/database/chainNetCalJac3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro3/database/chainNetCalJac3
UCSC track
Dog Chain/Net
UCSC
Pan troglodytes
9598
panTro3
GRanges object from UCSC track 'Dog Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCanFam2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro3/database/chainNetCanFam2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro3/database/chainNetCanFam2
UCSC track
Opossum Chain/Net
UCSC
Pan troglodytes
9598
panTro3
GRanges object from UCSC track 'Opossum Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMonDom5", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro3/database/chainNetMonDom5_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro3/database/chainNetMonDom5
UCSC track
Simple Repeats
UCSC
Pan troglodytes
9598
panTro1
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/panTro1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/panTro1/database/simpleRepeat
UCSC track
Other RefSeq
UCSC
Bos taurus
9913
bosTau7
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau7/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau7/database/xenoRefGene
UCSC track
Dog Chain/Net
UCSC
Bos taurus
9913
bosTau7
GRanges object from UCSC track 'Dog Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetCanFam2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau7/database/chainNetCanFam2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau7/database/chainNetCanFam2
UCSC track
Opossum Chain/Net
UCSC
Bos taurus
9913
bosTau7
GRanges object from UCSC track 'Opossum Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMonDom5", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau7/database/chainNetMonDom5_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau7/database/chainNetMonDom5
UCSC track
Human Chain/Net
UCSC
Bos taurus
9913
bosTau4
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg19", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau4/database/chainNetHg19_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau4/database/chainNetHg19
UCSC track
Platypus Chain/Net
UCSC
Bos taurus
9913
bosTau4
GRanges object from UCSC track 'Platypus Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetOrnAna1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/bosTau4/database/chainNetOrnAna1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/bosTau4/database/chainNetOrnAna1
UCSC track
Simple Repeats
UCSC
Canis familiaris
9615
canFam3
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam3/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam3/database/simpleRepeat
UCSC track
Other RefSeq
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/xenoRefGene
UCSC track
Genscan Genes
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/genscan
UCSC track
Human Proteins
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'Human Proteins'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("blastHg18KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/blastHg18KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/blastHg18KG
UCSC track
Most Conserved
UCSC
Canis familiaris
9615
canFam2
GRanges object from UCSC track 'Most Conserved'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("phastConsElements4way", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/canFam2/database/phastConsElements4way_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/canFam2/database/phastConsElements4way
UCSC track
Interrupted Rpts
UCSC
Tursiops truncatus
9739
turTru2
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/turTru2/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/turTru2/database/nestedRepeats
UCSC track
WM + SDust
UCSC
Tursiops truncatus
9739
turTru2
GRanges object from UCSC track 'WM + SDust'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("windowmaskerSdust", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/turTru2/database/windowmaskerSdust_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/turTru2/database/windowmaskerSdust
UCSC track
Simple Repeats
UCSC
Tursiops truncatus
9739
turTru2
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/turTru2/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/turTru2/database/simpleRepeat
UCSC track
Other RefSeq
UCSC
Loxodonta africana
9785
loxAfr3
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/loxAfr3/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/loxAfr3/database/xenoRefGene
UCSC track
Human Chain/Net
UCSC
Loxodonta africana
9785
loxAfr3
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg19", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/loxAfr3/database/chainNetHg19_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/loxAfr3/database/chainNetHg19
UCSC track
Interrupted Rpts
UCSC
Loxodonta africana
9785
loxAfr3
GRanges object from UCSC track 'Interrupted Rpts'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/loxAfr3/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/loxAfr3/database/nestedRepeats
UCSC track
Other RefSeq
UCSC
Cavia porcellus
10141
cavPor3
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cavPor3/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cavPor3/database/xenoRefGene
UCSC track
Ensembl Genes
UCSC
Cavia porcellus
10141
cavPor3
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cavPor3/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cavPor3/database/ensGene
UCSC track
N-SCAN
UCSC
Cavia porcellus
10141
cavPor3
GRanges object from UCSC track 'N-SCAN'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("nscanGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cavPor3/database/nscanGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cavPor3/database/nscanGene
UCSC track
Genscan Genes
UCSC
Cavia porcellus
10141
cavPor3
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cavPor3/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cavPor3/database/genscan
UCSC track
Human Proteins
UCSC
Cavia porcellus
10141
cavPor3
GRanges object from UCSC track 'Human Proteins'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("blastHg18KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cavPor3/database/blastHg18KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cavPor3/database/blastHg18KG
UCSC track
Spliced ESTs
UCSC
Cavia porcellus
10141
cavPor3
GRanges object from UCSC track 'Spliced ESTs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cavPor3/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cavPor3/database/intronEst
UCSC track
CpG Islands
UCSC
Cavia porcellus
10141
cavPor3
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cavPor3/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cavPor3/database/cpgIslandExt
UCSC track
Rat Chain/Net
UCSC
Cavia porcellus
10141
cavPor3
GRanges object from UCSC track 'Rat Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetRn4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cavPor3/database/chainNetRn4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cavPor3/database/chainNetRn4
UCSC track
Mouse Chain/Net
UCSC
Cavia porcellus
10141
cavPor3
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cavPor3/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cavPor3/database/chainNetMm9
UCSC track
Rabbit Chain/Net
UCSC
Cavia porcellus
10141
cavPor3
GRanges object from UCSC track 'Rabbit Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetOryCun2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cavPor3/database/chainNetOryCun2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cavPor3/database/chainNetOryCun2
UCSC track
Opossum Chain/Net
UCSC
Cavia porcellus
10141
cavPor3
GRanges object from UCSC track 'Opossum Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMonDom4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cavPor3/database/chainNetMonDom4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cavPor3/database/chainNetMonDom4
UCSC track
Chicken Chain/Net
UCSC
Cavia porcellus
10141
cavPor3
GRanges object from UCSC track 'Chicken Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetGalGal3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cavPor3/database/chainNetGalGal3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cavPor3/database/chainNetGalGal3
UCSC track
Chicken Chain/Net
UCSC
Equus caballus
9796
equCab1
GRanges object from UCSC track 'Chicken Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetGalGal3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab1/database/chainNetGalGal3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab1/database/chainNetGalGal3
UCSC track
RepeatMasker
UCSC
Equus caballus
9796
equCab1
GRanges object from UCSC track 'RepeatMasker'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab1/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab1/database/rmsk
UCSC track
WM + SDust
UCSC
Equus caballus
9796
equCab1
GRanges object from UCSC track 'WM + SDust'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("windowmaskerSdust", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab1/database/windowmaskerSdust_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab1/database/windowmaskerSdust
UCSC track
Simple Repeats
UCSC
Equus caballus
9796
equCab1
GRanges object from UCSC track 'Simple Repeats'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/equCab1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/equCab1/database/simpleRepeat
UCSC track
Ensembl Assembly
UCSC
Dipodomys ordii
10020
dipOrd1
GRanges object from UCSC track 'Ensembl Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensemblGeneScaffold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dipOrd1/database/ensemblGeneScaffold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dipOrd1/database/ensemblGeneScaffold
UCSC track
Ensembl Genes
UCSC
Dipodomys ordii
10020
dipOrd1
GRanges object from UCSC track 'Ensembl Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dipOrd1/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dipOrd1/database/ensGene
UCSC track
Genscan Genes
UCSC
Dipodomys ordii
10020
dipOrd1
GRanges object from UCSC track 'Genscan Genes'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dipOrd1/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dipOrd1/database/genscan
UCSC track
CpG Islands
UCSC
Dipodomys ordii
10020
dipOrd1
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dipOrd1/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dipOrd1/database/cpgIslandExt
UCSC track
Mouse Chain/Net
UCSC
Dipodomys ordii
10020
dipOrd1
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm10", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dipOrd1/database/chainNetMm10_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dipOrd1/database/chainNetMm10
UCSC track
WM + SDust
UCSC
Dipodomys ordii
10020
dipOrd1
GRanges object from UCSC track 'WM + SDust'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("windowmaskerSdust", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dipOrd1/database/windowmaskerSdust_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dipOrd1/database/windowmaskerSdust
UCSC track
Human Chain/Net
UCSC
Callithrix jacchus
9483
calJac1
GRanges object from UCSC track 'Human Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetHg19", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac1/database/chainNetHg19_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac1/database/chainNetHg19
UCSC track
Mouse Chain/Net
UCSC
Callithrix jacchus
9483
calJac1
GRanges object from UCSC track 'Mouse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac1/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac1/database/chainNetMm9
UCSC track
Platypus Chain/Net
UCSC
Callithrix jacchus
9483
calJac1
GRanges object from UCSC track 'Platypus Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetOrnAna1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/calJac1/database/chainNetOrnAna1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/calJac1/database/chainNetOrnAna1
UCSC track
Ensembl Assembly
UCSC
Pteropus vampyrus
132908
pteVam1
GRanges object from UCSC track 'Ensembl Assembly'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ensemblGeneScaffold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/pteVam1/database/ensemblGeneScaffold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/pteVam1/database/ensemblGeneScaffold
UCSC track
Map Contigs
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'Map Contigs'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("ctgPos", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/ctgPos_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/ctgPos
UCSC track
WSSD Coverage
UCSC
Mus musculus
10090
mm8
GRanges object from UCSC track 'WSSD Coverage'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("wssdCoverage", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/mm8/database/wssdCoverage_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/mm8/database/wssdCoverage
UCSC track
Zebrafish Chain/Net
UCSC
Monodelphis domestica
13616
monDom1
GRanges object from UCSC track 'Zebrafish Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetDanRer2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/monDom1/database/chainNetDanRer2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/monDom1/database/chainNetDanRer2
UCSC track
Other RefSeq
UCSC
Ornithorhynchus anatinus
9258
ornAna1
GRanges object from UCSC track 'Other RefSeq'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ornAna1/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ornAna1/database/xenoRefGene
UCSC track
CpG Islands
UCSC
Ornithorhynchus anatinus
9258
ornAna1
GRanges object from UCSC track 'CpG Islands'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ornAna1/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ornAna1/database/cpgIslandExt
UCSC track
Most Conserved
UCSC
Ornithorhynchus anatinus
9258
ornAna1
GRanges object from UCSC track 'Most Conserved'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("phastConsElements6way", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ornAna1/database/phastConsElements6way_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ornAna1/database/phastConsElements6way
UCSC track
Horse Chain/Net
UCSC
Ornithorhynchus anatinus
9258
ornAna1
GRanges object from UCSC track 'Horse Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetEquCab2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ornAna1/database/chainNetEquCab2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ornAna1/database/chainNetEquCab2
UCSC track
Orangutan Chain/Net
UCSC
Ornithorhynchus anatinus
9258
ornAna1
GRanges object from UCSC track 'Orangutan Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetPonAbe2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ornAna1/database/chainNetPonAbe2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ornAna1/database/chainNetPonAbe2
UCSC track
Lizard Chain/Net
UCSC
Ornithorhynchus anatinus
9258
ornAna1
GRanges object from UCSC track 'Lizard Chain/Net'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("chainNetAnoCar2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ornAna1/database/chainNetAnoCar2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ornAna1/database/chainNetAnoCar2
UCSC track
Segmental Dups
UCSC
Ornithorhynchus anatinus
9258
ornAna1
GRanges object from UCSC track 'Segmental Dups'
1
Marc Carlson <mcarlson@fhcrc.org>
2013-03-26
UCSCFullTrackImportPreparer
c("genomicSuperDups", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ornAna1/database/genomicSuperDups_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ornAna1/database/genomicSuperDups
UCSC track
Chicken Chain/Net
UCSC
Petromyzon marinus
7757
petMar1
GRanges object from on UCSC track â€˜Chicken Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetGalGal3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/petMar1/database/chainNetGalGal3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/petMar1/database/chainNetGalGal3
UCSC track
Interrupted Rpts
UCSC
Petromyzon marinus
7757
petMar1
GRanges object from on UCSC track â€˜Interrupted Rptsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/petMar1/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/petMar1/database/nestedRepeats
UCSC track
Simple Repeats
UCSC
Petromyzon marinus
7757
petMar1
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/petMar1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/petMar1/database/simpleRepeat
UCSC track
Gap
UCSC
Anolis carolinensis
28377
anoCar2
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoCar2/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoCar2/database/gap
UCSC track
Lizard mRNAs
UCSC
Anolis carolinensis
28377
anoCar2
GRanges object from on UCSC track â€˜Lizard mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoCar2/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoCar2/database/mrna
UCSC track
Lizard ESTs
UCSC
Anolis carolinensis
28377
anoCar2
GRanges object from on UCSC track â€˜Lizard ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoCar2/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoCar2/database/est
UCSC track
CpG Islands
UCSC
Anolis carolinensis
28377
anoCar2
GRanges object from on UCSC track â€˜CpG Islandsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoCar2/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoCar2/database/cpgIslandExt
UCSC track
Chicken Chain/Net
UCSC
Anolis carolinensis
28377
anoCar2
GRanges object from on UCSC track â€˜Chicken Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetGalGal3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoCar2/database/chainNetGalGal3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoCar2/database/chainNetGalGal3
UCSC track
Mouse Chain/Net
UCSC
Anolis carolinensis
28377
anoCar2
GRanges object from on UCSC track â€˜Mouse Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoCar2/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoCar2/database/chainNetMm9
UCSC track
X. tropicalis Chain/Net
UCSC
Anolis carolinensis
28377
anoCar2
GRanges object from on UCSC track â€˜X. tropicalis Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetXenTro3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoCar2/database/chainNetXenTro3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoCar2/database/chainNetXenTro3
UCSC track
RepeatMasker
UCSC
Anolis carolinensis
28377
anoCar2
GRanges object from on UCSC track â€˜RepeatMaskerâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoCar2/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoCar2/database/rmsk
UCSC track
WM + SDust
UCSC
Anolis carolinensis
28377
anoCar2
GRanges object from on UCSC track â€˜WM + SDustâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("windowmaskerSdust", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoCar2/database/windowmaskerSdust_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoCar2/database/windowmaskerSdust
UCSC track
Assembly
UCSC
Anolis carolinensis
28377
anoCar1
GRanges object from on UCSC track â€˜Assemblyâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoCar1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoCar1/database/gold
UCSC track
Other RefSeq
UCSC
Anolis carolinensis
28377
anoCar1
GRanges object from on UCSC track â€˜Other RefSeqâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoCar1/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoCar1/database/xenoRefGene
UCSC track
Genscan Genes
UCSC
Anolis carolinensis
28377
anoCar1
GRanges object from on UCSC track â€˜Genscan Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoCar1/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoCar1/database/genscan
UCSC track
Lizard mRNAs
UCSC
Anolis carolinensis
28377
anoCar1
GRanges object from on UCSC track â€˜Lizard mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoCar1/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoCar1/database/mrna
UCSC track
Chicken Chain/Net
UCSC
Anolis carolinensis
28377
anoCar1
GRanges object from on UCSC track â€˜Chicken Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetGalGal3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoCar1/database/chainNetGalGal3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoCar1/database/chainNetGalGal3
UCSC track
Mouse Chain/Net
UCSC
Anolis carolinensis
28377
anoCar1
GRanges object from on UCSC track â€˜Mouse Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoCar1/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoCar1/database/chainNetMm9
UCSC track
xenTro2 Chain/Net
UCSC
Anolis carolinensis
28377
anoCar1
GRanges object from on UCSC track â€˜xenTro2 Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetXenTro2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoCar1/database/chainNetXenTro2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoCar1/database/chainNetXenTro2
UCSC track
RepeatMasker
UCSC
Anolis carolinensis
28377
anoCar1
GRanges object from on UCSC track â€˜RepeatMaskerâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoCar1/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoCar1/database/rmsk
UCSC track
Simple Repeats
UCSC
Anolis carolinensis
28377
anoCar1
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoCar1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoCar1/database/simpleRepeat
UCSC track
Scaffolds
UCSC
Oryzias latipes
8090
oryLat2
GRanges object from on UCSC track â€˜Scaffoldsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("ctgPos2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oryLat2/database/ctgPos2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oryLat2/database/ctgPos2
UCSC track
Publications
UCSC
Oryzias latipes
8090
oryLat2
GRanges object from on UCSC track â€˜Publicationsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("pubs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oryLat2/database/pubs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oryLat2/database/pubs
UCSC track
Other RefSeq
UCSC
Oryzias latipes
8090
oryLat2
GRanges object from on UCSC track â€˜Other RefSeqâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oryLat2/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oryLat2/database/xenoRefGene
UCSC track
tRNA Genes
UCSC
Oryzias latipes
8090
oryLat2
GRanges object from on UCSC track â€˜tRNA Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oryLat2/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oryLat2/database/tRNAs
UCSC track
Medaka mRNAs
UCSC
Oryzias latipes
8090
oryLat2
GRanges object from on UCSC track â€˜Medaka mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oryLat2/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oryLat2/database/mrna
UCSC track
Medaka ESTs
UCSC
Oryzias latipes
8090
oryLat2
GRanges object from on UCSC track â€˜Medaka ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oryLat2/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oryLat2/database/est
UCSC track
Fugu Chain/Net
UCSC
Oryzias latipes
8090
oryLat2
GRanges object from on UCSC track â€˜Fugu Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetFr3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oryLat2/database/chainNetFr3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oryLat2/database/chainNetFr3
UCSC track
Tetraodon Chain/Net
UCSC
Oryzias latipes
8090
oryLat2
GRanges object from on UCSC track â€˜Tetraodon Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetTetNig2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oryLat2/database/chainNetTetNig2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oryLat2/database/chainNetTetNig2
UCSC track
Mouse Chain/Net
UCSC
Oryzias latipes
8090
oryLat2
GRanges object from on UCSC track â€˜Mouse Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oryLat2/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oryLat2/database/chainNetMm9
UCSC track
Lamprey Chain/Net
UCSC
Oryzias latipes
8090
oryLat2
GRanges object from on UCSC track â€˜Lamprey Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetPetMar2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oryLat2/database/chainNetPetMar2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oryLat2/database/chainNetPetMar2
UCSC track
Interrupted Rpts
UCSC
Oryzias latipes
8090
oryLat2
GRanges object from on UCSC track â€˜Interrupted Rptsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oryLat2/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oryLat2/database/nestedRepeats
UCSC track
Simple Repeats
UCSC
Oryzias latipes
8090
oryLat2
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oryLat2/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oryLat2/database/simpleRepeat
UCSC track
Assembly
UCSC
Geospiza fortis
48883
geoFor1
GRanges object from on UCSC track â€˜Assemblyâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/geoFor1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/geoFor1/database/gold
UCSC track
Genscan Genes
UCSC
Geospiza fortis
48883
geoFor1
GRanges object from on UCSC track â€˜Genscan Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/geoFor1/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/geoFor1/database/genscan
UCSC track
CpG Islands
UCSC
Geospiza fortis
48883
geoFor1
GRanges object from on UCSC track â€˜CpG Islandsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/geoFor1/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/geoFor1/database/cpgIslandExt
UCSC track
Zebra finch Chain/Net
UCSC
Geospiza fortis
48883
geoFor1
GRanges object from on UCSC track â€˜Zebra finch Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetTaeGut1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/geoFor1/database/chainNetTaeGut1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/geoFor1/database/chainNetTaeGut1
UCSC track
Turkey Chain/Net
UCSC
Geospiza fortis
48883
geoFor1
GRanges object from on UCSC track â€˜Turkey Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetMelGal1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/geoFor1/database/chainNetMelGal1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/geoFor1/database/chainNetMelGal1
UCSC track
Mouse Chain/Net
UCSC
Geospiza fortis
48883
geoFor1
GRanges object from on UCSC track â€˜Mouse Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetMm10", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/geoFor1/database/chainNetMm10_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/geoFor1/database/chainNetMm10
UCSC track
RepeatMasker
UCSC
Geospiza fortis
48883
geoFor1
GRanges object from on UCSC track â€˜RepeatMaskerâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/geoFor1/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/geoFor1/database/rmsk
UCSC track
WM + SDust
UCSC
Geospiza fortis
48883
geoFor1
GRanges object from on UCSC track â€˜WM + SDustâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("windowmaskerSdust", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/geoFor1/database/windowmaskerSdust_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/geoFor1/database/windowmaskerSdust
UCSC track
Assembly
UCSC
Oreochromis niloticus
8128
oreNil2
GRanges object from on UCSC track â€˜Assemblyâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oreNil2/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oreNil2/database/gold
UCSC track
Genscan Genes
UCSC
Oreochromis niloticus
8128
oreNil2
GRanges object from on UCSC track â€˜Genscan Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oreNil2/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oreNil2/database/genscan
UCSC track
Spliced ESTs
UCSC
Oreochromis niloticus
8128
oreNil2
GRanges object from on UCSC track â€˜Spliced ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oreNil2/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oreNil2/database/intronEst
UCSC track
CpG Islands
UCSC
Oreochromis niloticus
8128
oreNil2
GRanges object from on UCSC track â€˜CpG Islandsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oreNil2/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oreNil2/database/cpgIslandExt
UCSC track
RepeatMasker
UCSC
Oreochromis niloticus
8128
oreNil2
GRanges object from on UCSC track â€˜RepeatMaskerâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oreNil2/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oreNil2/database/rmsk
UCSC track
WM + SDust
UCSC
Oreochromis niloticus
8128
oreNil2
GRanges object from on UCSC track â€˜WM + SDustâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("windowmaskerSdust", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/oreNil2/database/windowmaskerSdust_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/oreNil2/database/windowmaskerSdust
UCSC track
Assembly
UCSC
Chrysemys picta
8479
chrPic1
GRanges object from on UCSC track â€˜Assemblyâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/chrPic1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/chrPic1/database/gold
UCSC track
Genscan Genes
UCSC
Chrysemys picta
8479
chrPic1
GRanges object from on UCSC track â€˜Genscan Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/chrPic1/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/chrPic1/database/genscan
UCSC track
Mouse Chain/Net
UCSC
Chrysemys picta
8479
chrPic1
GRanges object from on UCSC track â€˜Mouse Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetMm10", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/chrPic1/database/chainNetMm10_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/chrPic1/database/chainNetMm10
UCSC track
Interrupted Rpts
UCSC
Chrysemys picta
8479
chrPic1
GRanges object from on UCSC track â€˜Interrupted Rptsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/chrPic1/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/chrPic1/database/nestedRepeats
UCSC track
Simple Repeats
UCSC
Chrysemys picta
8479
chrPic1
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/chrPic1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/chrPic1/database/simpleRepeat
UCSC track
Gap
UCSC
Gasterosteus aculeatus
69293
gasAcu1
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gasAcu1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gasAcu1/database/gap
UCSC track
Other RefSeq
UCSC
Gasterosteus aculeatus
69293
gasAcu1
GRanges object from on UCSC track â€˜Other RefSeqâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gasAcu1/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gasAcu1/database/xenoRefGene
UCSC track
N-SCAN
UCSC
Gasterosteus aculeatus
69293
gasAcu1
GRanges object from on UCSC track â€˜N-SCANâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("nscanGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gasAcu1/database/nscanGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gasAcu1/database/nscanGene
UCSC track
Human Proteins
UCSC
Gasterosteus aculeatus
69293
gasAcu1
GRanges object from on UCSC track â€˜Human Proteinsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastHg18KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gasAcu1/database/blastHg18KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gasAcu1/database/blastHg18KG
UCSC track
Spliced ESTs
UCSC
Gasterosteus aculeatus
69293
gasAcu1
GRanges object from on UCSC track â€˜Spliced ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gasAcu1/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gasAcu1/database/intronEst
UCSC track
Most Conserved
UCSC
Gasterosteus aculeatus
69293
gasAcu1
GRanges object from on UCSC track â€˜Most Conservedâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("phastConsElements8way", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gasAcu1/database/phastConsElements8way_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gasAcu1/database/phastConsElements8way
UCSC track
Medaka Chain/Net
UCSC
Gasterosteus aculeatus
69293
gasAcu1
GRanges object from on UCSC track â€˜Medaka Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetOryLat2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gasAcu1/database/chainNetOryLat2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gasAcu1/database/chainNetOryLat2
UCSC track
Zebrafish Chain/Net
UCSC
Gasterosteus aculeatus
69293
gasAcu1
GRanges object from on UCSC track â€˜Zebrafish Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetDanRer7", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gasAcu1/database/chainNetDanRer7_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gasAcu1/database/chainNetDanRer7
UCSC track
Chicken Chain/Net
UCSC
Gasterosteus aculeatus
69293
gasAcu1
GRanges object from on UCSC track â€˜Chicken Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetGalGal3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gasAcu1/database/chainNetGalGal3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gasAcu1/database/chainNetGalGal3
UCSC track
Human Chain/Net
UCSC
Gasterosteus aculeatus
69293
gasAcu1
GRanges object from on UCSC track â€˜Human Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetHg19", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gasAcu1/database/chainNetHg19_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gasAcu1/database/chainNetHg19
UCSC track
WM + SDust
UCSC
Gasterosteus aculeatus
69293
gasAcu1
GRanges object from on UCSC track â€˜WM + SDustâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("windowmaskerSdust", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/gasAcu1/database/windowmaskerSdust_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/gasAcu1/database/windowmaskerSdust
UCSC track
Scaffolds
UCSC
Tetraodon nigroviridis
99883
tetNig2
GRanges object from on UCSC track â€˜Scaffoldsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/tetNig2/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/tetNig2/database/gold
UCSC track
Ensembl Genes
UCSC
Tetraodon nigroviridis
99883
tetNig2
GRanges object from on UCSC track â€˜Ensembl Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/tetNig2/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/tetNig2/database/ensGene
UCSC track
tRNA Genes
UCSC
Tetraodon nigroviridis
99883
tetNig2
GRanges object from on UCSC track â€˜tRNA Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/tetNig2/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/tetNig2/database/tRNAs
UCSC track
Tetraodon mRNAs
UCSC
Tetraodon nigroviridis
99883
tetNig2
GRanges object from on UCSC track â€˜Tetraodon mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/tetNig2/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/tetNig2/database/mrna
UCSC track
CpG Islands
UCSC
Tetraodon nigroviridis
99883
tetNig2
GRanges object from on UCSC track â€˜CpG Islandsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/tetNig2/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/tetNig2/database/cpgIslandExt
UCSC track
Medaka Chain/Net
UCSC
Tetraodon nigroviridis
99883
tetNig2
GRanges object from on UCSC track â€˜Medaka Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetOryLat2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/tetNig2/database/chainNetOryLat2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/tetNig2/database/chainNetOryLat2
UCSC track
Zebrafish Chain/Net
UCSC
Tetraodon nigroviridis
99883
tetNig2
GRanges object from on UCSC track â€˜Zebrafish Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetDanRer7", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/tetNig2/database/chainNetDanRer7_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/tetNig2/database/chainNetDanRer7
UCSC track
Human Chain/Net
UCSC
Tetraodon nigroviridis
99883
tetNig2
GRanges object from on UCSC track â€˜Human Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetHg19", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/tetNig2/database/chainNetHg19_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/tetNig2/database/chainNetHg19
UCSC track
WM + SDust
UCSC
Tetraodon nigroviridis
99883
tetNig2
GRanges object from on UCSC track â€˜WM + SDustâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("windowmaskerSdust", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/tetNig2/database/windowmaskerSdust_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/tetNig2/database/windowmaskerSdust
UCSC track
Scaffolds
UCSC
Tetraodon nigroviridis
99883
tetNig1
GRanges object from on UCSC track â€˜Scaffoldsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/tetNig1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/tetNig1/database/gold
UCSC track
Ensembl Genes
UCSC
Tetraodon nigroviridis
99883
tetNig1
GRanges object from on UCSC track â€˜Ensembl Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/tetNig1/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/tetNig1/database/ensGene
UCSC track
Genoscope GAZE
UCSC
Tetraodon nigroviridis
99883
tetNig1
GRanges object from on UCSC track â€˜Genoscope GAZEâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gaze", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/tetNig1/database/gaze_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/tetNig1/database/gaze
UCSC track
Genscan Genes
UCSC
Tetraodon nigroviridis
99883
tetNig1
GRanges object from on UCSC track â€˜Genscan Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/tetNig1/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/tetNig1/database/genscan
UCSC track
Human Proteins
UCSC
Tetraodon nigroviridis
99883
tetNig1
GRanges object from on UCSC track â€˜Human Proteinsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastHg18KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/tetNig1/database/blastHg18KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/tetNig1/database/blastHg18KG
UCSC track
Fugu Chain/Net
UCSC
Tetraodon nigroviridis
99883
tetNig1
GRanges object from on UCSC track â€˜Fugu Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetFr2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/tetNig1/database/chainNetFr2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/tetNig1/database/chainNetFr2
UCSC track
Stickleback Chain/Net
UCSC
Tetraodon nigroviridis
99883
tetNig1
GRanges object from on UCSC track â€˜Stickleback Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetGasAcu1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/tetNig1/database/chainNetGasAcu1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/tetNig1/database/chainNetGasAcu1
UCSC track
Mouse Chain/Net
UCSC
Tetraodon nigroviridis
99883
tetNig1
GRanges object from on UCSC track â€˜Mouse Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/tetNig1/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/tetNig1/database/chainNetMm9
UCSC track
Self Chain
UCSC
Tetraodon nigroviridis
99883
tetNig1
GRanges object from on UCSC track â€˜Self Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainSelf", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/tetNig1/database/chainSelf_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/tetNig1/database/chainSelf
UCSC track
RepeatMasker
UCSC
Tetraodon nigroviridis
99883
tetNig1
GRanges object from on UCSC track â€˜RepeatMaskerâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/tetNig1/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/tetNig1/database/rmsk
UCSC track
Assembly
UCSC
Meleagris gallopavo
9103
melGal1
GRanges object from on UCSC track â€˜Assemblyâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/melGal1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/melGal1/database/gold
UCSC track
Gap
UCSC
Meleagris gallopavo
9103
melGal1
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/melGal1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/melGal1/database/gap
UCSC track
Other RefSeq
UCSC
Meleagris gallopavo
9103
melGal1
GRanges object from on UCSC track â€˜Other RefSeqâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/melGal1/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/melGal1/database/xenoRefGene
UCSC track
N-SCAN
UCSC
Meleagris gallopavo
9103
melGal1
GRanges object from on UCSC track â€˜N-SCANâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("nscanGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/melGal1/database/nscanGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/melGal1/database/nscanGene
UCSC track
Human Proteins
UCSC
Meleagris gallopavo
9103
melGal1
GRanges object from on UCSC track â€˜Human Proteinsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastHg18KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/melGal1/database/blastHg18KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/melGal1/database/blastHg18KG
UCSC track
Spliced ESTs
UCSC
Meleagris gallopavo
9103
melGal1
GRanges object from on UCSC track â€˜Spliced ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/melGal1/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/melGal1/database/intronEst
UCSC track
Other mRNAs
UCSC
Meleagris gallopavo
9103
melGal1
GRanges object from on UCSC track â€˜Other mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/melGal1/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/melGal1/database/xenoMrna
UCSC track
Chicken Chain/Net
UCSC
Meleagris gallopavo
9103
melGal1
GRanges object from on UCSC track â€˜Chicken Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetGalGal3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/melGal1/database/chainNetGalGal3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/melGal1/database/chainNetGalGal3
UCSC track
Medium ground finch Chain/Net
UCSC
Meleagris gallopavo
9103
melGal1
GRanges object from on UCSC track â€˜Medium ground finch Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetGeoFor1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/melGal1/database/chainNetGeoFor1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/melGal1/database/chainNetGeoFor1
UCSC track
Rat Chain/Net
UCSC
Meleagris gallopavo
9103
melGal1
GRanges object from on UCSC track â€˜Rat Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetRn4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/melGal1/database/chainNetRn4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/melGal1/database/chainNetRn4
UCSC track
Human Chain/Net
UCSC
Meleagris gallopavo
9103
melGal1
GRanges object from on UCSC track â€˜Human Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetHg19", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/melGal1/database/chainNetHg19_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/melGal1/database/chainNetHg19
UCSC track
Zebrafish Chain/Net
UCSC
Meleagris gallopavo
9103
melGal1
GRanges object from on UCSC track â€˜Zebrafish Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetDanRer7", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/melGal1/database/chainNetDanRer7_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/melGal1/database/chainNetDanRer7
UCSC track
Interrupted Rpts
UCSC
Meleagris gallopavo
9103
melGal1
GRanges object from on UCSC track â€˜Interrupted Rptsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/melGal1/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/melGal1/database/nestedRepeats
UCSC track
Assembly
UCSC
Xenopus tropicalis
8364
xenTro3
GRanges object from on UCSC track â€˜Assemblyâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro3/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro3/database/gold
UCSC track
Gap
UCSC
Xenopus tropicalis
8364
xenTro3
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro3/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro3/database/gap
UCSC track
RefSeq Genes
UCSC
Xenopus tropicalis
8364
xenTro3
GRanges object from on UCSC track â€˜RefSeq Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro3/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro3/database/refGene
UCSC track
Ensembl Genes
UCSC
Xenopus tropicalis
8364
xenTro3
GRanges object from on UCSC track â€˜Ensembl Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro3/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro3/database/ensGene
UCSC track
tRNA Genes
UCSC
Xenopus tropicalis
8364
xenTro3
GRanges object from on UCSC track â€˜tRNA Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro3/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro3/database/tRNAs
UCSC track
X. tropicalis mRNAs
UCSC
Xenopus tropicalis
8364
xenTro3
GRanges object from on UCSC track â€˜X. tropicalis mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro3/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro3/database/mrna
UCSC track
X. tropicalis ESTs
UCSC
Xenopus tropicalis
8364
xenTro3
GRanges object from on UCSC track â€˜X. tropicalis ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro3/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro3/database/est
UCSC track
Chicken Chain/Net
UCSC
Xenopus tropicalis
8364
xenTro3
GRanges object from on UCSC track â€˜Chicken Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetGalGal3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro3/database/chainNetGalGal3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro3/database/chainNetGalGal3
UCSC track
Opossum Chain/Net
UCSC
Xenopus tropicalis
8364
xenTro3
GRanges object from on UCSC track â€˜Opossum Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetMonDom5", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro3/database/chainNetMonDom5_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro3/database/chainNetMonDom5
UCSC track
Mouse Chain/Net
UCSC
Xenopus tropicalis
8364
xenTro3
GRanges object from on UCSC track â€˜Mouse Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro3/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro3/database/chainNetMm9
UCSC track
Zebrafish Chain/Net
UCSC
Xenopus tropicalis
8364
xenTro3
GRanges object from on UCSC track â€˜Zebrafish Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetDanRer7", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro3/database/chainNetDanRer7_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro3/database/chainNetDanRer7
UCSC track
Interrupted Rpts
UCSC
Xenopus tropicalis
8364
xenTro3
GRanges object from on UCSC track â€˜Interrupted Rptsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro3/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro3/database/nestedRepeats
UCSC track
Simple Repeats
UCSC
Xenopus tropicalis
8364
xenTro3
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro3/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro3/database/simpleRepeat
UCSC track
Assembly
UCSC
Xenopus tropicalis
8364
xenTro2
GRanges object from on UCSC track â€˜Assemblyâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro2/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro2/database/gold
UCSC track
Publications
UCSC
Xenopus tropicalis
8364
xenTro2
GRanges object from on UCSC track â€˜Publicationsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("pubs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro2/database/pubs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro2/database/pubs
UCSC track
RefSeq Genes
UCSC
Xenopus tropicalis
8364
xenTro2
GRanges object from on UCSC track â€˜RefSeq Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro2/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro2/database/refGene
UCSC track
XGC Genes
UCSC
Xenopus tropicalis
8364
xenTro2
GRanges object from on UCSC track â€˜XGC Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mgcFullMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro2/database/mgcFullMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro2/database/mgcFullMrna
UCSC track
Genscan Genes
UCSC
Xenopus tropicalis
8364
xenTro2
GRanges object from on UCSC track â€˜Genscan Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro2/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro2/database/genscan
UCSC track
X. tropicalis mRNAs
UCSC
Xenopus tropicalis
8364
xenTro2
GRanges object from on UCSC track â€˜X. tropicalis mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro2/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro2/database/mrna
UCSC track
X. tropicalis ESTs
UCSC
Xenopus tropicalis
8364
xenTro2
GRanges object from on UCSC track â€˜X. tropicalis ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro2/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro2/database/est
UCSC track
Lizard Chain/Net
UCSC
Xenopus tropicalis
8364
xenTro2
GRanges object from on UCSC track â€˜Lizard Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetAnoCar2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro2/database/chainNetAnoCar2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro2/database/chainNetAnoCar2
UCSC track
monDom4 Chain/Net
UCSC
Xenopus tropicalis
8364
xenTro2
GRanges object from on UCSC track â€˜monDom4 Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetMonDom4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro2/database/chainNetMonDom4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro2/database/chainNetMonDom4
UCSC track
Mouse Chain/Net
UCSC
Xenopus tropicalis
8364
xenTro2
GRanges object from on UCSC track â€˜Mouse Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro2/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro2/database/chainNetMm9
UCSC track
Zebrafish Chain/Net
UCSC
Xenopus tropicalis
8364
xenTro2
GRanges object from on UCSC track â€˜Zebrafish Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetDanRer7", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro2/database/chainNetDanRer7_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro2/database/chainNetDanRer7
UCSC track
Simple Repeats
UCSC
Xenopus tropicalis
8364
xenTro2
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro2/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro2/database/simpleRepeat
UCSC track
Assembly
UCSC
Xenopus tropicalis
8364
xenTro1
GRanges object from on UCSC track â€˜Assemblyâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro1/database/gold
UCSC track
JGI Genes
UCSC
Xenopus tropicalis
8364
xenTro1
GRanges object from on UCSC track â€˜JGI Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("jgiFilteredModels", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro1/database/jgiFilteredModels_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro1/database/jgiFilteredModels
UCSC track
Human Proteins
UCSC
Xenopus tropicalis
8364
xenTro1
GRanges object from on UCSC track â€˜Human Proteinsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastHg17KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro1/database/blastHg17KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro1/database/blastHg17KG
UCSC track
X. tropicalis mRNAs
UCSC
Xenopus tropicalis
8364
xenTro1
GRanges object from on UCSC track â€˜X. tropicalis mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro1/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro1/database/mrna
UCSC track
X. tropicalis ESTs
UCSC
Xenopus tropicalis
8364
xenTro1
GRanges object from on UCSC track â€˜X. tropicalis ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro1/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro1/database/est
UCSC track
Fugu Blat
UCSC
Xenopus tropicalis
8364
xenTro1
GRanges object from on UCSC track â€˜Fugu Blatâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blatFr1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro1/database/blatFr1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro1/database/blatFr1
UCSC track
Mouse Chain/Net
UCSC
Xenopus tropicalis
8364
xenTro1
GRanges object from on UCSC track â€˜Mouse Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetMm8", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro1/database/chainNetMm8_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro1/database/chainNetMm8
UCSC track
Zebrafish Chain/Net
UCSC
Xenopus tropicalis
8364
xenTro1
GRanges object from on UCSC track â€˜Zebrafish Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetDanRer1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro1/database/chainNetDanRer1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro1/database/chainNetDanRer1
UCSC track
Simple Repeats
UCSC
Xenopus tropicalis
8364
xenTro1
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/xenTro1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/xenTro1/database/simpleRepeat
UCSC track
Gap
UCSC
Taeniopygia guttata
59729
taeGut1
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/taeGut1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/taeGut1/database/gap
UCSC track
Other RefSeq
UCSC
Taeniopygia guttata
59729
taeGut1
GRanges object from on UCSC track â€˜Other RefSeqâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/taeGut1/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/taeGut1/database/xenoRefGene
UCSC track
N-SCAN
UCSC
Taeniopygia guttata
59729
taeGut1
GRanges object from on UCSC track â€˜N-SCANâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("nscanGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/taeGut1/database/nscanGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/taeGut1/database/nscanGene
UCSC track
tRNA Genes
UCSC
Taeniopygia guttata
59729
taeGut1
GRanges object from on UCSC track â€˜tRNA Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/taeGut1/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/taeGut1/database/tRNAs
UCSC track
Zebra finch mRNAs
UCSC
Taeniopygia guttata
59729
taeGut1
GRanges object from on UCSC track â€˜Zebra finch mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/taeGut1/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/taeGut1/database/mrna
UCSC track
Zebra finch ESTs
UCSC
Taeniopygia guttata
59729
taeGut1
GRanges object from on UCSC track â€˜Zebra finch ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/taeGut1/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/taeGut1/database/est
UCSC track
Medium ground finch Chain/Net
UCSC
Taeniopygia guttata
59729
taeGut1
GRanges object from on UCSC track â€˜Medium ground finch Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetGeoFor1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/taeGut1/database/chainNetGeoFor1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/taeGut1/database/chainNetGeoFor1
UCSC track
Turkey Chain/Net
UCSC
Taeniopygia guttata
59729
taeGut1
GRanges object from on UCSC track â€˜Turkey Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetMelGal1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/taeGut1/database/chainNetMelGal1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/taeGut1/database/chainNetMelGal1
UCSC track
RepeatMasker
UCSC
Taeniopygia guttata
59729
taeGut1
GRanges object from on UCSC track â€˜RepeatMaskerâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/taeGut1/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/taeGut1/database/rmsk
UCSC track
Simple Repeats
UCSC
Taeniopygia guttata
59729
taeGut1
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/taeGut1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/taeGut1/database/simpleRepeat
UCSC track
Contigs
UCSC
Danio rerio
7955
danRer7
GRanges object from on UCSC track â€˜Contigsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("ctgPos2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer7/database/ctgPos2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer7/database/ctgPos2
UCSC track
RefSeq Genes
UCSC
Danio rerio
7955
danRer7
GRanges object from on UCSC track â€˜RefSeq Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer7/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer7/database/refGene
UCSC track
ZGC Genes
UCSC
Danio rerio
7955
danRer7
GRanges object from on UCSC track â€˜ZGC Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mgcFullMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer7/database/mgcFullMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer7/database/mgcFullMrna
UCSC track
tRNA Genes
UCSC
Danio rerio
7955
danRer7
GRanges object from on UCSC track â€˜tRNA Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer7/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer7/database/tRNAs
UCSC track
Zebrafish mRNAs
UCSC
Danio rerio
7955
danRer7
GRanges object from on UCSC track â€˜Zebrafish mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer7/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer7/database/mrna
UCSC track
Zebrafish ESTs
UCSC
Danio rerio
7955
danRer7
GRanges object from on UCSC track â€˜Zebrafish ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer7/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer7/database/est
UCSC track
CpG Islands
UCSC
Danio rerio
7955
danRer7
GRanges object from on UCSC track â€˜CpG Islandsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer7/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer7/database/cpgIslandExt
UCSC track
X. tropicalis Chain/Net
UCSC
Danio rerio
7955
danRer7
GRanges object from on UCSC track â€˜X. tropicalis Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetXenTro3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer7/database/chainNetXenTro3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer7/database/chainNetXenTro3
UCSC track
Vertebrate Chain/Net
UCSC
Danio rerio
7955
danRer7
GRanges object from on UCSC track â€˜Vertebrate Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("vertebrateChainNet", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer7/database/vertebrateChainNet_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer7/database/vertebrateChainNet
UCSC track
Chimp Chain/Net
UCSC
Danio rerio
7955
danRer7
GRanges object from on UCSC track â€˜Chimp Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetPanTro3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer7/database/chainNetPanTro3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer7/database/chainNetPanTro3
UCSC track
Interrupted Rpts
UCSC
Danio rerio
7955
danRer7
GRanges object from on UCSC track â€˜Interrupted Rptsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer7/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer7/database/nestedRepeats
UCSC track
Assembly
UCSC
Danio rerio
7955
danRer6
GRanges object from on UCSC track â€˜Assemblyâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer6/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer6/database/gold
UCSC track
Publications
UCSC
Danio rerio
7955
danRer6
GRanges object from on UCSC track â€˜Publicationsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("pubs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer6/database/pubs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer6/database/pubs
UCSC track
RefSeq Genes
UCSC
Danio rerio
7955
danRer6
GRanges object from on UCSC track â€˜RefSeq Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer6/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer6/database/refGene
UCSC track
ZGC Genes
UCSC
Danio rerio
7955
danRer6
GRanges object from on UCSC track â€˜ZGC Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mgcFullMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer6/database/mgcFullMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer6/database/mgcFullMrna
UCSC track
tRNA Genes
UCSC
Danio rerio
7955
danRer6
GRanges object from on UCSC track â€˜tRNA Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer6/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer6/database/tRNAs
UCSC track
Zebrafish mRNAs
UCSC
Danio rerio
7955
danRer6
GRanges object from on UCSC track â€˜Zebrafish mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer6/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer6/database/mrna
UCSC track
Zebrafish ESTs
UCSC
Danio rerio
7955
danRer6
GRanges object from on UCSC track â€˜Zebrafish ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer6/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer6/database/est
UCSC track
CpG Islands
UCSC
Danio rerio
7955
danRer6
GRanges object from on UCSC track â€˜CpG Islandsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("cpgIslandExt", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer6/database/cpgIslandExt_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer6/database/cpgIslandExt
UCSC track
Most Conserved
UCSC
Danio rerio
7955
danRer6
GRanges object from on UCSC track â€˜Most Conservedâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("phastConsElements6way", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer6/database/phastConsElements6way_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer6/database/phastConsElements6way
UCSC track
Stickleback Chain/Net
UCSC
Danio rerio
7955
danRer6
GRanges object from on UCSC track â€˜Stickleback Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetGasAcu1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer6/database/chainNetGasAcu1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer6/database/chainNetGasAcu1
UCSC track
Interrupted Rpts
UCSC
Danio rerio
7955
danRer6
GRanges object from on UCSC track â€˜Interrupted Rptsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("nestedRepeats", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer6/database/nestedRepeats_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer6/database/nestedRepeats
UCSC track
Contigs
UCSC
Danio rerio
7955
danRer5
GRanges object from on UCSC track â€˜Contigsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("ctgPos2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer5/database/ctgPos2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer5/database/ctgPos2
UCSC track
RefSeq Genes
UCSC
Danio rerio
7955
danRer5
GRanges object from on UCSC track â€˜RefSeq Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer5/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer5/database/refGene
UCSC track
ZGC Genes
UCSC
Danio rerio
7955
danRer5
GRanges object from on UCSC track â€˜ZGC Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mgcFullMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer5/database/mgcFullMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer5/database/mgcFullMrna
UCSC track
Vega Pseudogenes
UCSC
Danio rerio
7955
danRer5
GRanges object from on UCSC track â€˜Vega Pseudogenesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("vegaPseudoGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer5/database/vegaPseudoGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer5/database/vegaPseudoGene
UCSC track
Human Proteins
UCSC
Danio rerio
7955
danRer5
GRanges object from on UCSC track â€˜Human Proteinsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastHg18KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer5/database/blastHg18KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer5/database/blastHg18KG
UCSC track
Spliced ESTs
UCSC
Danio rerio
7955
danRer5
GRanges object from on UCSC track â€˜Spliced ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer5/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer5/database/intronEst
UCSC track
Affy Zebrafish
UCSC
Danio rerio
7955
danRer5
GRanges object from on UCSC track â€˜Affy Zebrafishâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("affyZebrafish", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer5/database/affyZebrafish_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer5/database/affyZebrafish
UCSC track
Medaka Chain/Net
UCSC
Danio rerio
7955
danRer5
GRanges object from on UCSC track â€˜Medaka Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetOryLat2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer5/database/chainNetOryLat2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer5/database/chainNetOryLat2
UCSC track
Tetraodon Chain/Net
UCSC
Danio rerio
7955
danRer5
GRanges object from on UCSC track â€˜Tetraodon Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetTetNig1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer5/database/chainNetTetNig1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer5/database/chainNetTetNig1
UCSC track
Mouse Chain/Net
UCSC
Danio rerio
7955
danRer5
GRanges object from on UCSC track â€˜Mouse Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer5/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer5/database/chainNetMm9
UCSC track
RepeatMasker
UCSC
Danio rerio
7955
danRer5
GRanges object from on UCSC track â€˜RepeatMaskerâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer5/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer5/database/rmsk
UCSC track
Simple Repeats
UCSC
Danio rerio
7955
danRer5
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer5/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer5/database/simpleRepeat
UCSC track
Contigs
UCSC
Danio rerio
7955
danRer4
GRanges object from on UCSC track â€˜Contigsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("ctgPos2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer4/database/ctgPos2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer4/database/ctgPos2
UCSC track
Radiation Hybrid
UCSC
Danio rerio
7955
danRer4
GRanges object from on UCSC track â€˜Radiation Hybridâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("rhMap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer4/database/rhMap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer4/database/rhMap
UCSC track
BAC End Singles
UCSC
Danio rerio
7955
danRer4
GRanges object from on UCSC track â€˜BAC End Singlesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("bacEndSingles", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer4/database/bacEndSingles_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer4/database/bacEndSingles
UCSC track
Ensembl Genes
UCSC
Danio rerio
7955
danRer4
GRanges object from on UCSC track â€˜Ensembl Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer4/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer4/database/ensGene
UCSC track
Other RefSeq
UCSC
Danio rerio
7955
danRer4
GRanges object from on UCSC track â€˜Other RefSeqâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer4/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer4/database/xenoRefGene
UCSC track
Vega Genes
UCSC
Danio rerio
7955
danRer4
GRanges object from on UCSC track â€˜Vega Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("vegaGeneZfish", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer4/database/vegaGeneZfish_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer4/database/vegaGeneZfish
UCSC track
CONTRAST
UCSC
Danio rerio
7955
danRer4
GRanges object from on UCSC track â€˜CONTRASTâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("contrastGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer4/database/contrastGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer4/database/contrastGene
UCSC track
Human Proteins
UCSC
Danio rerio
7955
danRer4
GRanges object from on UCSC track â€˜Human Proteinsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastHg18KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer4/database/blastHg18KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer4/database/blastHg18KG
UCSC track
Spliced ESTs
UCSC
Danio rerio
7955
danRer4
GRanges object from on UCSC track â€˜Spliced ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer4/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer4/database/intronEst
UCSC track
Affy Zebrafish
UCSC
Danio rerio
7955
danRer4
GRanges object from on UCSC track â€˜Affy Zebrafishâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("affyZebrafish", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer4/database/affyZebrafish_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer4/database/affyZebrafish
UCSC track
Most Conserved
UCSC
Danio rerio
7955
danRer4
GRanges object from on UCSC track â€˜Most Conservedâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("phastConsElements", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer4/database/phastConsElements_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer4/database/phastConsElements
UCSC track
Fugu Chain/Net
UCSC
Danio rerio
7955
danRer4
GRanges object from on UCSC track â€˜Fugu Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetFr2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer4/database/chainNetFr2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer4/database/chainNetFr2
UCSC track
xenTro2 Chain/Net
UCSC
Danio rerio
7955
danRer4
GRanges object from on UCSC track â€˜xenTro2 Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetXenTro2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer4/database/chainNetXenTro2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer4/database/chainNetXenTro2
UCSC track
Opossum Chain/Net
UCSC
Danio rerio
7955
danRer4
GRanges object from on UCSC track â€˜Opossum Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetMonDom4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer4/database/chainNetMonDom4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer4/database/chainNetMonDom4
UCSC track
Mouse Chain/Net
UCSC
Danio rerio
7955
danRer4
GRanges object from on UCSC track â€˜Mouse Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetMm8", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer4/database/chainNetMm8_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer4/database/chainNetMm8
UCSC track
Human Chain/Net
UCSC
Danio rerio
7955
danRer4
GRanges object from on UCSC track â€˜Human Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetHg18", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer4/database/chainNetHg18_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer4/database/chainNetHg18
UCSC track
Simple Repeats
UCSC
Danio rerio
7955
danRer4
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer4/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer4/database/simpleRepeat
UCSC track
Scaffolds
UCSC
Danio rerio
7955
danRer3
GRanges object from on UCSC track â€˜Scaffoldsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer3/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer3/database/gold
UCSC track
Gap
UCSC
Danio rerio
7955
danRer3
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer3/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer3/database/gap
UCSC track
BAC End Pairs
UCSC
Danio rerio
7955
danRer3
GRanges object from on UCSC track â€˜BAC End Pairsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("bacEndPairs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer3/database/bacEndPairs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer3/database/bacEndPairs
UCSC track
RefSeq Genes
UCSC
Danio rerio
7955
danRer3
GRanges object from on UCSC track â€˜RefSeq Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer3/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer3/database/refGene
UCSC track
ZGC Genes
UCSC
Danio rerio
7955
danRer3
GRanges object from on UCSC track â€˜ZGC Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mgcFullMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer3/database/mgcFullMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer3/database/mgcFullMrna
UCSC track
Zebrafish mRNAs
UCSC
Danio rerio
7955
danRer3
GRanges object from on UCSC track â€˜Zebrafish mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer3/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer3/database/mrna
UCSC track
Zebrafish ESTs
UCSC
Danio rerio
7955
danRer3
GRanges object from on UCSC track â€˜Zebrafish ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer3/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer3/database/est
UCSC track
TIGR Gene Index
UCSC
Danio rerio
7955
danRer3
GRanges object from on UCSC track â€˜TIGR Gene Indexâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("tigrGeneIndex", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer3/database/tigrGeneIndex_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer3/database/tigrGeneIndex
UCSC track
Affy Zebrafish
UCSC
Danio rerio
7955
danRer3
GRanges object from on UCSC track â€˜Affy Zebrafishâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("affyZebrafish", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer3/database/affyZebrafish_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer3/database/affyZebrafish
UCSC track
Most Conserved
UCSC
Danio rerio
7955
danRer3
GRanges object from on UCSC track â€˜Most Conservedâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("phastConsElements", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer3/database/phastConsElements_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer3/database/phastConsElements
UCSC track
Tetraodon Chain/Net
UCSC
Danio rerio
7955
danRer3
GRanges object from on UCSC track â€˜Tetraodon Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetTetNig1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer3/database/chainNetTetNig1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer3/database/chainNetTetNig1
UCSC track
Human Chain/Net
UCSC
Danio rerio
7955
danRer3
GRanges object from on UCSC track â€˜Human Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetHg18", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer3/database/chainNetHg18_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer3/database/chainNetHg18
UCSC track
Simple Repeats
UCSC
Danio rerio
7955
danRer3
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/danRer3/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/danRer3/database/simpleRepeat
UCSC track
Gap
UCSC
Ciona intestinalis
7719
ci2
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ci2/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ci2/database/gap
UCSC track
Other RefSeq
UCSC
Ciona intestinalis
7719
ci2
GRanges object from on UCSC track â€˜Other RefSeqâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ci2/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ci2/database/xenoRefGene
UCSC track
C. intestinalis mRNAs
UCSC
Ciona intestinalis
7719
ci2
GRanges object from on UCSC track â€˜C. intestinalis mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ci2/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ci2/database/mrna
UCSC track
C. intestinalis ESTs
UCSC
Ciona intestinalis
7719
ci2
GRanges object from on UCSC track â€˜C. intestinalis ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ci2/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ci2/database/est
UCSC track
RepeatMasker
UCSC
Ciona intestinalis
7719
ci2
GRanges object from on UCSC track â€˜RepeatMaskerâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ci2/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ci2/database/rmsk
UCSC track
Gap
UCSC
Ciona intestinalis
7719
ci1
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ci1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ci1/database/gap
UCSC track
RefSeq Genes
UCSC
Ciona intestinalis
7719
ci1
GRanges object from on UCSC track â€˜RefSeq Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ci1/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ci1/database/refGene
UCSC track
JGI Genes
UCSC
Ciona intestinalis
7719
ci1
GRanges object from on UCSC track â€˜JGI Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("jgiGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ci1/database/jgiGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ci1/database/jgiGene
UCSC track
Human Proteins
UCSC
Ciona intestinalis
7719
ci1
GRanges object from on UCSC track â€˜Human Proteinsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastHg16KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ci1/database/blastHg16KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ci1/database/blastHg16KG
UCSC track
Spliced ESTs
UCSC
Ciona intestinalis
7719
ci1
GRanges object from on UCSC track â€˜Spliced ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ci1/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ci1/database/intronEst
UCSC track
Other mRNAs
UCSC
Ciona intestinalis
7719
ci1
GRanges object from on UCSC track â€˜Other mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ci1/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ci1/database/xenoMrna
UCSC track
RepeatMasker
UCSC
Ciona intestinalis
7719
ci1
GRanges object from on UCSC track â€˜RepeatMaskerâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ci1/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ci1/database/rmsk
UCSC track
Scaffolds
UCSC
Branchiostoma floridae
7739
braFlo1
GRanges object from on UCSC track â€˜Scaffoldsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/braFlo1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/braFlo1/database/gold
UCSC track
Human Proteins
UCSC
Branchiostoma floridae
7739
braFlo1
GRanges object from on UCSC track â€˜Human Proteinsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastHg18KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/braFlo1/database/blastHg18KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/braFlo1/database/blastHg18KG
UCSC track
Spliced ESTs
UCSC
Branchiostoma floridae
7739
braFlo1
GRanges object from on UCSC track â€˜Spliced ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/braFlo1/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/braFlo1/database/intronEst
UCSC track
Other mRNAs
UCSC
Branchiostoma floridae
7739
braFlo1
GRanges object from on UCSC track â€˜Other mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/braFlo1/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/braFlo1/database/xenoMrna
UCSC track
Most Conserved
UCSC
Branchiostoma floridae
7739
braFlo1
GRanges object from on UCSC track â€˜Most Conservedâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("phastConsElements5way", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/braFlo1/database/phastConsElements5way_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/braFlo1/database/phastConsElements5way
UCSC track
Human Chain/Net
UCSC
Branchiostoma floridae
7739
braFlo1
GRanges object from on UCSC track â€˜Human Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetHg18", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/braFlo1/database/chainNetHg18_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/braFlo1/database/chainNetHg18
UCSC track
Mouse Chain/Net
UCSC
Branchiostoma floridae
7739
braFlo1
GRanges object from on UCSC track â€˜Mouse Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetMm9", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/braFlo1/database/chainNetMm9_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/braFlo1/database/chainNetMm9
UCSC track
Simple Repeats
UCSC
Branchiostoma floridae
7739
braFlo1
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/braFlo1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/braFlo1/database/simpleRepeat
UCSC track
Gap
UCSC
Strongylocentrotus purpuratus
7668
strPur2
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/strPur2/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/strPur2/database/gap
UCSC track
Other RefSeq
UCSC
Strongylocentrotus purpuratus
7668
strPur2
GRanges object from on UCSC track â€˜Other RefSeqâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/strPur2/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/strPur2/database/xenoRefGene
UCSC track
Human Proteins
UCSC
Strongylocentrotus purpuratus
7668
strPur2
GRanges object from on UCSC track â€˜Human Proteinsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastHg18KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/strPur2/database/blastHg18KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/strPur2/database/blastHg18KG
UCSC track
Spliced ESTs
UCSC
Strongylocentrotus purpuratus
7668
strPur2
GRanges object from on UCSC track â€˜Spliced ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/strPur2/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/strPur2/database/intronEst
UCSC track
Other mRNAs
UCSC
Strongylocentrotus purpuratus
7668
strPur2
GRanges object from on UCSC track â€˜Other mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/strPur2/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/strPur2/database/xenoMrna
UCSC track
C. intestinalis Net
UCSC
Strongylocentrotus purpuratus
7668
strPur2
GRanges object from on UCSC track â€˜C. intestinalis Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netCi2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/strPur2/database/netCi2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/strPur2/database/netCi2
UCSC track
RepeatMasker
UCSC
Strongylocentrotus purpuratus
7668
strPur2
GRanges object from on UCSC track â€˜RepeatMaskerâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/strPur2/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/strPur2/database/rmsk
UCSC track
Assembly
UCSC
Strongylocentrotus purpuratus
7668
strPur1
GRanges object from on UCSC track â€˜Assemblyâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/strPur1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/strPur1/database/gold
UCSC track
RefSeq Genes
UCSC
Strongylocentrotus purpuratus
7668
strPur1
GRanges object from on UCSC track â€˜RefSeq Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/strPur1/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/strPur1/database/refGene
UCSC track
Genscan Genes
UCSC
Strongylocentrotus purpuratus
7668
strPur1
GRanges object from on UCSC track â€˜Genscan Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/strPur1/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/strPur1/database/genscan
UCSC track
S. purpuratus mRNAs
UCSC
Strongylocentrotus purpuratus
7668
strPur1
GRanges object from on UCSC track â€˜S. purpuratus mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/strPur1/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/strPur1/database/mrna
UCSC track
Human Chain/Net
UCSC
Strongylocentrotus purpuratus
7668
strPur1
GRanges object from on UCSC track â€˜Human Chain/Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainNetHg18", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/strPur1/database/chainNetHg18_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/strPur1/database/chainNetHg18
UCSC track
Simple Repeats
UCSC
Strongylocentrotus purpuratus
7668
strPur1
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/strPur1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/strPur1/database/simpleRepeat
UCSC track
NCBI Genes
UCSC
Apis mellifera
7460
apiMel2
GRanges object from on UCSC track â€˜NCBI Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("modelRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/apiMel2/database/modelRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/apiMel2/database/modelRefGene
UCSC track
Homologs (EMBL)
UCSC
Apis mellifera
7460
apiMel2
GRanges object from on UCSC track â€˜Homologs (EMBL)â€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("brhInparalog", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/apiMel2/database/brhInparalog_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/apiMel2/database/brhInparalog
UCSC track
Genscan Genes
UCSC
Apis mellifera
7460
apiMel2
GRanges object from on UCSC track â€˜Genscan Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/apiMel2/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/apiMel2/database/genscan
UCSC track
Human  Proteins
UCSC
Apis mellifera
7460
apiMel2
GRanges object from on UCSC track â€˜Human  Proteinsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastHg17KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/apiMel2/database/blastHg17KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/apiMel2/database/blastHg17KG
UCSC track
Spliced ESTs
UCSC
Apis mellifera
7460
apiMel2
GRanges object from on UCSC track â€˜Spliced ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/apiMel2/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/apiMel2/database/intronEst
UCSC track
Other mRNAs
UCSC
Apis mellifera
7460
apiMel2
GRanges object from on UCSC track â€˜Other mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/apiMel2/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/apiMel2/database/xenoMrna
UCSC track
D. mel. Net
UCSC
Apis mellifera
7460
apiMel2
GRanges object from on UCSC track â€˜D. mel. Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netDm2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/apiMel2/database/netDm2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/apiMel2/database/netDm2
UCSC track
Simple Repeats
UCSC
Apis mellifera
7460
apiMel2
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/apiMel2/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/apiMel2/database/simpleRepeat
UCSC track
Gap
UCSC
Apis mellifera
7460
apiMel1
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/apiMel1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/apiMel1/database/gap
UCSC track
Other RefSeq
UCSC
Apis mellifera
7460
apiMel1
GRanges object from on UCSC track â€˜Other RefSeqâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/apiMel1/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/apiMel1/database/xenoRefGene
UCSC track
D. mel. Proteins
UCSC
Apis mellifera
7460
apiMel1
GRanges object from on UCSC track â€˜D. mel. Proteinsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastDm1FB", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/apiMel1/database/blastDm1FB_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/apiMel1/database/blastDm1FB
UCSC track
Spliced ESTs
UCSC
Apis mellifera
7460
apiMel1
GRanges object from on UCSC track â€˜Spliced ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/apiMel1/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/apiMel1/database/intronEst
UCSC track
Other mRNAs
UCSC
Apis mellifera
7460
apiMel1
GRanges object from on UCSC track â€˜Other mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/apiMel1/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/apiMel1/database/xenoMrna
UCSC track
D. mel. Net
UCSC
Apis mellifera
7460
apiMel1
GRanges object from on UCSC track â€˜D. mel. Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netDm2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/apiMel1/database/netDm2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/apiMel1/database/netDm2
UCSC track
Simple Repeats
UCSC
Apis mellifera
7460
apiMel1
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/apiMel1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/apiMel1/database/simpleRepeat
UCSC track
Gap
UCSC
Anopheles gambiae
7165
anoGam1
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoGam1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoGam1/database/gap
UCSC track
Other RefSeq
UCSC
Anopheles gambiae
7165
anoGam1
GRanges object from on UCSC track â€˜Other RefSeqâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoGam1/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoGam1/database/xenoRefGene
UCSC track
Geneid Genes
UCSC
Anopheles gambiae
7165
anoGam1
GRanges object from on UCSC track â€˜Geneid Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("geneid", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoGam1/database/geneid_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoGam1/database/geneid
UCSC track
D. mel. Proteins
UCSC
Anopheles gambiae
7165
anoGam1
GRanges object from on UCSC track â€˜D. mel. Proteinsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastDm2FB", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoGam1/database/blastDm2FB_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoGam1/database/blastDm2FB
UCSC track
Spliced ESTs
UCSC
Anopheles gambiae
7165
anoGam1
GRanges object from on UCSC track â€˜Spliced ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoGam1/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoGam1/database/intronEst
UCSC track
Other mRNAs
UCSC
Anopheles gambiae
7165
anoGam1
GRanges object from on UCSC track â€˜Other mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoGam1/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoGam1/database/xenoMrna
UCSC track
AnoEST Non-Unique
UCSC
Anopheles gambiae
7165
anoGam1
GRanges object from on UCSC track â€˜AnoEST Non-Uniqueâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("anoEstNcl", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoGam1/database/anoEstNcl_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoGam1/database/anoEstNcl
UCSC track
D. mel. Net
UCSC
Anopheles gambiae
7165
anoGam1
GRanges object from on UCSC track â€˜D. mel. Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netDm3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoGam1/database/netDm3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoGam1/database/netDm3
UCSC track
Simple Repeats
UCSC
Anopheles gambiae
7165
anoGam1
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/anoGam1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/anoGam1/database/simpleRepeat
UCSC track
Gap
UCSC
Drosophila ananassae
7217
droAna2
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droAna2/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droAna2/database/gap
UCSC track
Other RefSeq
UCSC
Drosophila ananassae
7217
droAna2
GRanges object from on UCSC track â€˜Other RefSeqâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droAna2/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droAna2/database/xenoRefGene
UCSC track
Genscan Genes
UCSC
Drosophila ananassae
7217
droAna2
GRanges object from on UCSC track â€˜Genscan Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droAna2/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droAna2/database/genscan
UCSC track
D. anan. mRNAs
UCSC
Drosophila ananassae
7217
droAna2
GRanges object from on UCSC track â€˜D. anan. mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droAna2/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droAna2/database/mrna
UCSC track
D. mel. Chain
UCSC
Drosophila ananassae
7217
droAna2
GRanges object from on UCSC track â€˜D. mel. Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainDm3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droAna2/database/chainDm3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droAna2/database/chainDm3
UCSC track
RepeatMasker
UCSC
Drosophila ananassae
7217
droAna2
GRanges object from on UCSC track â€˜RepeatMaskerâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droAna2/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droAna2/database/rmsk
UCSC track
Gap
UCSC
Drosophila ananassae
7217
droAna1
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droAna1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droAna1/database/gap
UCSC track
Other RefSeq
UCSC
Drosophila ananassae
7217
droAna1
GRanges object from on UCSC track â€˜Other RefSeqâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droAna1/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droAna1/database/xenoRefGene
UCSC track
Genscan Genes
UCSC
Drosophila ananassae
7217
droAna1
GRanges object from on UCSC track â€˜Genscan Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droAna1/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droAna1/database/genscan
UCSC track
D. anan. mRNAs
UCSC
Drosophila ananassae
7217
droAna1
GRanges object from on UCSC track â€˜D. anan. mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droAna1/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droAna1/database/mrna
UCSC track
D. mel. Chain
UCSC
Drosophila ananassae
7217
droAna1
GRanges object from on UCSC track â€˜D. mel. Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainDm2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droAna1/database/chainDm2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droAna1/database/chainDm2
UCSC track
RepeatMasker
UCSC
Drosophila ananassae
7217
droAna1
GRanges object from on UCSC track â€˜RepeatMaskerâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droAna1/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droAna1/database/rmsk
UCSC track
Assembly
UCSC
Drosophila erecta
7220
droEre1
GRanges object from on UCSC track â€˜Assemblyâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droEre1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droEre1/database/gold
UCSC track
GeneMapper
UCSC
Drosophila erecta
7220
droEre1
GRanges object from on UCSC track â€˜GeneMapperâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("geneMapper", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droEre1/database/geneMapper_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droEre1/database/geneMapper
UCSC track
D. mel. Proteins
UCSC
Drosophila erecta
7220
droEre1
GRanges object from on UCSC track â€˜D. mel. Proteinsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastDm2FB", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droEre1/database/blastDm2FB_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droEre1/database/blastDm2FB
UCSC track
D. mel. Chain
UCSC
Drosophila erecta
7220
droEre1
GRanges object from on UCSC track â€˜D. mel. Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainDm3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droEre1/database/chainDm3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droEre1/database/chainDm3
UCSC track
RepeatMasker
UCSC
Drosophila erecta
7220
droEre1
GRanges object from on UCSC track â€˜RepeatMaskerâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droEre1/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droEre1/database/rmsk
UCSC track
Assembly
UCSC
Drosophila grimshawi
7222
droGri1
GRanges object from on UCSC track â€˜Assemblyâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droGri1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droGri1/database/gold
UCSC track
Genscan Genes
UCSC
Drosophila grimshawi
7222
droGri1
GRanges object from on UCSC track â€˜Genscan Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droGri1/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droGri1/database/genscan
UCSC track
Other mRNAs
UCSC
Drosophila grimshawi
7222
droGri1
GRanges object from on UCSC track â€˜Other mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droGri1/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droGri1/database/xenoMrna
UCSC track
D. mel. Net
UCSC
Drosophila grimshawi
7222
droGri1
GRanges object from on UCSC track â€˜D. mel. Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netDm2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droGri1/database/netDm2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droGri1/database/netDm2
UCSC track
Simple Repeats
UCSC
Drosophila grimshawi
7222
droGri1
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droGri1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droGri1/database/simpleRepeat
UCSC track
Assembly
UCSC
Drosophila melanogaster
7227
dm3
GRanges object from on UCSC track â€˜Assemblyâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm3/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm3/database/gold
UCSC track
GDP Insertions
UCSC
Drosophila melanogaster
7227
dm3
GRanges object from on UCSC track â€˜GDP Insertionsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("pscreen", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm3/database/pscreen_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm3/database/pscreen
UCSC track
BAC End Pairs
UCSC
Drosophila melanogaster
7227
dm3
GRanges object from on UCSC track â€˜BAC End Pairsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("bacEndPairs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm3/database/bacEndPairs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm3/database/bacEndPairs
UCSC track
FlyBase Genes
UCSC
Drosophila melanogaster
7227
dm3
GRanges object from on UCSC track â€˜FlyBase Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("flyBaseGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm3/database/flyBaseGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm3/database/flyBaseGene
UCSC track
RefSeq Genes
UCSC
Drosophila melanogaster
7227
dm3
GRanges object from on UCSC track â€˜RefSeq Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm3/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm3/database/refGene
UCSC track
Ensembl Genes
UCSC
Drosophila melanogaster
7227
dm3
GRanges object from on UCSC track â€˜Ensembl Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("ensGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm3/database/ensGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm3/database/ensGene
UCSC track
CONTRAST
UCSC
Drosophila melanogaster
7227
dm3
GRanges object from on UCSC track â€˜CONTRASTâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("contrastGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm3/database/contrastGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm3/database/contrastGene
UCSC track
Human Proteins
UCSC
Drosophila melanogaster
7227
dm3
GRanges object from on UCSC track â€˜Human Proteinsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastHg18KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm3/database/blastHg18KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm3/database/blastHg18KG
UCSC track
Spliced ESTs
UCSC
Drosophila melanogaster
7227
dm3
GRanges object from on UCSC track â€˜Spliced ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm3/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm3/database/intronEst
UCSC track
Other mRNAs
UCSC
Drosophila melanogaster
7227
dm3
GRanges object from on UCSC track â€˜Other mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm3/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm3/database/xenoMrna
UCSC track
Affy Transfrags
UCSC
Drosophila melanogaster
7227
dm3
GRanges object from on UCSC track â€˜Affy Transfragsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("affyDrosDevTransfrags", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm3/database/affyDrosDevTransfrags_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm3/database/affyDrosDevTransfrags
UCSC track
BDTNP ChIP/chip
UCSC
Drosophila melanogaster
7227
dm3
GRanges object from on UCSC track â€˜BDTNP ChIP/chipâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("bdtnpChipper", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm3/database/bdtnpChipper_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm3/database/bdtnpChipper
UCSC track
A. gambiae Chain
UCSC
Drosophila melanogaster
7227
dm3
GRanges object from on UCSC track â€˜A. gambiae Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainAnoGam1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm3/database/chainAnoGam1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm3/database/chainAnoGam1
UCSC track
D. pseudo. Chain
UCSC
Drosophila melanogaster
7227
dm3
GRanges object from on UCSC track â€˜D. pseudo. Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainDp3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm3/database/chainDp3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm3/database/chainDp3
UCSC track
D. persimilis Chain
UCSC
Drosophila melanogaster
7227
dm3
GRanges object from on UCSC track â€˜D. persimilis Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainDroPer1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm3/database/chainDroPer1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm3/database/chainDroPer1
UCSC track
D. ananassae Chain
UCSC
Drosophila melanogaster
7227
dm3
GRanges object from on UCSC track â€˜D. ananassae Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainDroAna2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm3/database/chainDroAna2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm3/database/chainDroAna2
UCSC track
D. erecta Chain
UCSC
Drosophila melanogaster
7227
dm3
GRanges object from on UCSC track â€˜D. erecta Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainDroEre1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm3/database/chainDroEre1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm3/database/chainDroEre1
UCSC track
D. yakuba Chain
UCSC
Drosophila melanogaster
7227
dm3
GRanges object from on UCSC track â€˜D. yakuba Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainDroYak2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm3/database/chainDroYak2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm3/database/chainDroYak2
UCSC track
D. sechellia Chain
UCSC
Drosophila melanogaster
7227
dm3
GRanges object from on UCSC track â€˜D. sechellia Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainDroSec1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm3/database/chainDroSec1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm3/database/chainDroSec1
UCSC track
D. simulans Chain
UCSC
Drosophila melanogaster
7227
dm3
GRanges object from on UCSC track â€˜D. simulans Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainDroSim1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm3/database/chainDroSim1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm3/database/chainDroSim1
UCSC track
RepeatMasker
UCSC
Drosophila melanogaster
7227
dm3
GRanges object from on UCSC track â€˜RepeatMaskerâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm3/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm3/database/rmsk
UCSC track
Chromosome Band
UCSC
Drosophila melanogaster
7227
dm2
GRanges object from on UCSC track â€˜Chromosome Bandâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("cytoBand", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm2/database/cytoBand_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm2/database/cytoBand
UCSC track
BAC End Pairs
UCSC
Drosophila melanogaster
7227
dm2
GRanges object from on UCSC track â€˜BAC End Pairsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("bacEndPairs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm2/database/bacEndPairs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm2/database/bacEndPairs
UCSC track
FlyBase Genes
UCSC
Drosophila melanogaster
7227
dm2
GRanges object from on UCSC track â€˜FlyBase Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("flyBaseGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm2/database/flyBaseGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm2/database/flyBaseGene
UCSC track
RefSeq Genes
UCSC
Drosophila melanogaster
7227
dm2
GRanges object from on UCSC track â€˜RefSeq Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm2/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm2/database/refGene
UCSC track
N-SCAN
UCSC
Drosophila melanogaster
7227
dm2
GRanges object from on UCSC track â€˜N-SCANâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("nscanGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm2/database/nscanGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm2/database/nscanGene
UCSC track
Genscan Genes
UCSC
Drosophila melanogaster
7227
dm2
GRanges object from on UCSC track â€˜Genscan Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm2/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm2/database/genscan
UCSC track
EvoFold
UCSC
Drosophila melanogaster
7227
dm2
GRanges object from on UCSC track â€˜EvoFoldâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("evofold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm2/database/evofold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm2/database/evofold
UCSC track
D. melanogaster mRNAs
UCSC
Drosophila melanogaster
7227
dm2
GRanges object from on UCSC track â€˜D. melanogaster mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm2/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm2/database/mrna
UCSC track
D. melanogaster ESTs
UCSC
Drosophila melanogaster
7227
dm2
GRanges object from on UCSC track â€˜D. melanogaster ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm2/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm2/database/est
UCSC track
BDTNP DNase Accs
UCSC
Drosophila melanogaster
7227
dm2
GRanges object from on UCSC track â€˜BDTNP DNase Accsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("bdtnpDnase", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm2/database/bdtnpDnase_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm2/database/bdtnpDnase
UCSC track
FlyReg
UCSC
Drosophila melanogaster
7227
dm2
GRanges object from on UCSC track â€˜FlyRegâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("flyreg2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm2/database/flyreg2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm2/database/flyreg2
UCSC track
PicTar miRNA
UCSC
Drosophila melanogaster
7227
dm2
GRanges object from on UCSC track â€˜PicTar miRNAâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("picTar", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm2/database/picTar_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm2/database/picTar
UCSC track
Most Conserved
UCSC
Drosophila melanogaster
7227
dm2
GRanges object from on UCSC track â€˜Most Conservedâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("phastConsElements15way", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm2/database/phastConsElements15way_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm2/database/phastConsElements15way
UCSC track
A. mellifera Net
UCSC
Drosophila melanogaster
7227
dm2
GRanges object from on UCSC track â€˜A. mellifera Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netApiMel2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm2/database/netApiMel2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm2/database/netApiMel2
UCSC track
A. gambiae Net
UCSC
Drosophila melanogaster
7227
dm2
GRanges object from on UCSC track â€˜A. gambiae Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netAnoGam1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm2/database/netAnoGam1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm2/database/netAnoGam1
UCSC track
D. virilis Net
UCSC
Drosophila melanogaster
7227
dm2
GRanges object from on UCSC track â€˜D. virilis Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netDroVir1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm2/database/netDroVir1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm2/database/netDroVir1
UCSC track
D. mojavensis Net
UCSC
Drosophila melanogaster
7227
dm2
GRanges object from on UCSC track â€˜D. mojavensis Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netDroMoj1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm2/database/netDroMoj1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm2/database/netDroMoj1
UCSC track
D. pseudo. Net
UCSC
Drosophila melanogaster
7227
dm2
GRanges object from on UCSC track â€˜D. pseudo. Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netDp3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm2/database/netDp3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm2/database/netDp3
UCSC track
D. persimilis Net
UCSC
Drosophila melanogaster
7227
dm2
GRanges object from on UCSC track â€˜D. persimilis Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netDroPer1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm2/database/netDroPer1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm2/database/netDroPer1
UCSC track
D. ananassae Net
UCSC
Drosophila melanogaster
7227
dm2
GRanges object from on UCSC track â€˜D. ananassae Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netDroAna1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm2/database/netDroAna1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm2/database/netDroAna1
UCSC track
D. yakuba Net
UCSC
Drosophila melanogaster
7227
dm2
GRanges object from on UCSC track â€˜D. yakuba Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netDroYak1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm2/database/netDroYak1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm2/database/netDroYak1
UCSC track
D. sechellia Net
UCSC
Drosophila melanogaster
7227
dm2
GRanges object from on UCSC track â€˜D. sechellia Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netDroSec1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm2/database/netDroSec1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm2/database/netDroSec1
UCSC track
D. simulans Net
UCSC
Drosophila melanogaster
7227
dm2
GRanges object from on UCSC track â€˜D. simulans Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netDroSim1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm2/database/netDroSim1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm2/database/netDroSim1
UCSC track
Simple Repeats
UCSC
Drosophila melanogaster
7227
dm2
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm2/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm2/database/simpleRepeat
UCSC track
Gap
UCSC
Drosophila melanogaster
7227
dm1
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm1/database/gap
UCSC track
GC Percent
UCSC
Drosophila melanogaster
7227
dm1
GRanges object from on UCSC track â€˜GC Percentâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gcPercent", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm1/database/gcPercent_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm1/database/gcPercent
UCSC track
FlyBase Non-coding
UCSC
Drosophila melanogaster
7227
dm1
GRanges object from on UCSC track â€˜FlyBase Non-codingâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("bdgpNonCoding", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm1/database/bdgpNonCoding_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm1/database/bdgpNonCoding
UCSC track
Other RefSeq
UCSC
Drosophila melanogaster
7227
dm1
GRanges object from on UCSC track â€˜Other RefSeqâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm1/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm1/database/xenoRefGene
UCSC track
Genscan Genes
UCSC
Drosophila melanogaster
7227
dm1
GRanges object from on UCSC track â€˜Genscan Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm1/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm1/database/genscan
UCSC track
Human Proteins
UCSC
Drosophila melanogaster
7227
dm1
GRanges object from on UCSC track â€˜Human Proteinsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastHg16KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm1/database/blastHg16KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm1/database/blastHg16KG
UCSC track
Spliced ESTs
UCSC
Drosophila melanogaster
7227
dm1
GRanges object from on UCSC track â€˜Spliced ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm1/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm1/database/intronEst
UCSC track
Other mRNAs
UCSC
Drosophila melanogaster
7227
dm1
GRanges object from on UCSC track â€˜Other mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm1/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm1/database/xenoMrna
UCSC track
Anopheles Ecores
UCSC
Drosophila melanogaster
7227
dm1
GRanges object from on UCSC track â€˜Anopheles Ecoresâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("anophelesEcores", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm1/database/anophelesEcores_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm1/database/anophelesEcores
UCSC track
A. gambiae Net
UCSC
Drosophila melanogaster
7227
dm1
GRanges object from on UCSC track â€˜A. gambiae Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netAnoGam1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm1/database/netAnoGam1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm1/database/netAnoGam1
UCSC track
D. pseudo. Net
UCSC
Drosophila melanogaster
7227
dm1
GRanges object from on UCSC track â€˜D. pseudo. Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netDp2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm1/database/netDp2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm1/database/netDp2
UCSC track
D. yakuba Net
UCSC
Drosophila melanogaster
7227
dm1
GRanges object from on UCSC track â€˜D. yakuba Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netDroYak1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm1/database/netDroYak1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm1/database/netDroYak1
UCSC track
RepeatMasker
UCSC
Drosophila melanogaster
7227
dm1
GRanges object from on UCSC track â€˜RepeatMaskerâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dm1/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dm1/database/rmsk
UCSC track
Assembly
UCSC
Drosophila mojavensis
7230
droMoj2
GRanges object from on UCSC track â€˜Assemblyâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droMoj2/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droMoj2/database/gold
UCSC track
GeneMapper
UCSC
Drosophila mojavensis
7230
droMoj2
GRanges object from on UCSC track â€˜GeneMapperâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("geneMapper", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droMoj2/database/geneMapper_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droMoj2/database/geneMapper
UCSC track
D. mel. Proteins
UCSC
Drosophila mojavensis
7230
droMoj2
GRanges object from on UCSC track â€˜D. mel. Proteinsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastDm2FB", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droMoj2/database/blastDm2FB_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droMoj2/database/blastDm2FB
UCSC track
Other mRNAs
UCSC
Drosophila mojavensis
7230
droMoj2
GRanges object from on UCSC track â€˜Other mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droMoj2/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droMoj2/database/xenoMrna
UCSC track
D. mel. Net
UCSC
Drosophila mojavensis
7230
droMoj2
GRanges object from on UCSC track â€˜D. mel. Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netDm2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droMoj2/database/netDm2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droMoj2/database/netDm2
UCSC track
Simple Repeats
UCSC
Drosophila mojavensis
7230
droMoj2
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droMoj2/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droMoj2/database/simpleRepeat
UCSC track
GC Percent
UCSC
Drosophila mojavensis
7230
droMoj1
GRanges object from on UCSC track â€˜GC Percentâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gcPercent", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droMoj1/database/gcPercent_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droMoj1/database/gcPercent
UCSC track
Geneid Genes
UCSC
Drosophila mojavensis
7230
droMoj1
GRanges object from on UCSC track â€˜Geneid Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("geneid", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droMoj1/database/geneid_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droMoj1/database/geneid
UCSC track
D. mel. Proteins
UCSC
Drosophila mojavensis
7230
droMoj1
GRanges object from on UCSC track â€˜D. mel. Proteinsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastDm2FB", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droMoj1/database/blastDm2FB_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droMoj1/database/blastDm2FB
UCSC track
Other mRNAs
UCSC
Drosophila mojavensis
7230
droMoj1
GRanges object from on UCSC track â€˜Other mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droMoj1/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droMoj1/database/xenoMrna
UCSC track
D. mel. Net
UCSC
Drosophila mojavensis
7230
droMoj1
GRanges object from on UCSC track â€˜D. mel. Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netDm2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droMoj1/database/netDm2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droMoj1/database/netDm2
UCSC track
Simple Repeats
UCSC
Drosophila mojavensis
7230
droMoj1
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droMoj1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droMoj1/database/simpleRepeat
UCSC track
Gap
UCSC
Drosophila persimilis
7234
droPer1
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droPer1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droPer1/database/gap
UCSC track
Other RefSeq
UCSC
Drosophila persimilis
7234
droPer1
GRanges object from on UCSC track â€˜Other RefSeqâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droPer1/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droPer1/database/xenoRefGene
UCSC track
D. mel. Proteins
UCSC
Drosophila persimilis
7234
droPer1
GRanges object from on UCSC track â€˜D. mel. Proteinsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastDm2FB", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droPer1/database/blastDm2FB_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droPer1/database/blastDm2FB
UCSC track
D. mel. Chain
UCSC
Drosophila persimilis
7234
droPer1
GRanges object from on UCSC track â€˜D. mel. Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainDm3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droPer1/database/chainDm3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droPer1/database/chainDm3
UCSC track
Gap
UCSC
Drosophila pseudoobscura
7237
dp3
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dp3/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dp3/database/gap
UCSC track
FlyBase
UCSC
Drosophila pseudoobscura
7237
dp3
GRanges object from on UCSC track â€˜FlyBaseâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("flyBaseGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dp3/database/flyBaseGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dp3/database/flyBaseGene
UCSC track
Twinscan
UCSC
Drosophila pseudoobscura
7237
dp3
GRanges object from on UCSC track â€˜Twinscanâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("twinscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dp3/database/twinscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dp3/database/twinscan
UCSC track
Geneid Genes
UCSC
Drosophila pseudoobscura
7237
dp3
GRanges object from on UCSC track â€˜Geneid Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("geneid", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dp3/database/geneid_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dp3/database/geneid
UCSC track
D. mel. Proteins
UCSC
Drosophila pseudoobscura
7237
dp3
GRanges object from on UCSC track â€˜D. mel. Proteinsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastDm2FB", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dp3/database/blastDm2FB_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dp3/database/blastDm2FB
UCSC track
Spliced ESTs
UCSC
Drosophila pseudoobscura
7237
dp3
GRanges object from on UCSC track â€˜Spliced ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dp3/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dp3/database/intronEst
UCSC track
Other mRNAs
UCSC
Drosophila pseudoobscura
7237
dp3
GRanges object from on UCSC track â€˜Other mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dp3/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dp3/database/xenoMrna
UCSC track
D. mel. Net
UCSC
Drosophila pseudoobscura
7237
dp3
GRanges object from on UCSC track â€˜D. mel. Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netDm3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dp3/database/netDm3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dp3/database/netDm3
UCSC track
Simple Repeats
UCSC
Drosophila pseudoobscura
7237
dp3
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dp3/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dp3/database/simpleRepeat
UCSC track
GC Percent
UCSC
Drosophila pseudoobscura
7237
dp2
GRanges object from on UCSC track â€˜GC Percentâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gcPercent", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dp2/database/gcPercent_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dp2/database/gcPercent
UCSC track
GeneMapper
UCSC
Drosophila pseudoobscura
7237
dp2
GRanges object from on UCSC track â€˜GeneMapperâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("geneMapper", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dp2/database/geneMapper_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dp2/database/geneMapper
UCSC track
Genscan Genes
UCSC
Drosophila pseudoobscura
7237
dp2
GRanges object from on UCSC track â€˜Genscan Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dp2/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dp2/database/genscan
UCSC track
D. pseudo. mRNAs
UCSC
Drosophila pseudoobscura
7237
dp2
GRanges object from on UCSC track â€˜D. pseudo. mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dp2/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dp2/database/mrna
UCSC track
D. pseudo. ESTs
UCSC
Drosophila pseudoobscura
7237
dp2
GRanges object from on UCSC track â€˜D. pseudo. ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dp2/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dp2/database/est
UCSC track
D. mel. Chain
UCSC
Drosophila pseudoobscura
7237
dp2
GRanges object from on UCSC track â€˜D. mel. Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainDm1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dp2/database/chainDm1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dp2/database/chainDm1
UCSC track
RepeatMasker
UCSC
Drosophila pseudoobscura
7237
dp2
GRanges object from on UCSC track â€˜RepeatMaskerâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/dp2/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/dp2/database/rmsk
UCSC track
Assembly
UCSC
Drosophila sechellia
7238
droSec1
GRanges object from on UCSC track â€˜Assemblyâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droSec1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droSec1/database/gold
UCSC track
Genscan Genes
UCSC
Drosophila sechellia
7238
droSec1
GRanges object from on UCSC track â€˜Genscan Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droSec1/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droSec1/database/genscan
UCSC track
Other mRNAs
UCSC
Drosophila sechellia
7238
droSec1
GRanges object from on UCSC track â€˜Other mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droSec1/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droSec1/database/xenoMrna
UCSC track
D. mel. Net
UCSC
Drosophila sechellia
7238
droSec1
GRanges object from on UCSC track â€˜D. mel. Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netDm3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droSec1/database/netDm3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droSec1/database/netDm3
UCSC track
Simple Repeats
UCSC
Drosophila sechellia
7238
droSec1
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droSec1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droSec1/database/simpleRepeat
UCSC track
Gap
UCSC
Drosophila simulans
7240
droSim1
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droSim1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droSim1/database/gap
UCSC track
Other RefSeq
UCSC
Drosophila simulans
7240
droSim1
GRanges object from on UCSC track â€˜Other RefSeqâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droSim1/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droSim1/database/xenoRefGene
UCSC track
Genscan Genes
UCSC
Drosophila simulans
7240
droSim1
GRanges object from on UCSC track â€˜Genscan Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("genscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droSim1/database/genscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droSim1/database/genscan
UCSC track
D. simulans mRNAs
UCSC
Drosophila simulans
7240
droSim1
GRanges object from on UCSC track â€˜D. simulans mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droSim1/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droSim1/database/mrna
UCSC track
D. simulans ESTs
UCSC
Drosophila simulans
7240
droSim1
GRanges object from on UCSC track â€˜D. simulans ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droSim1/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droSim1/database/est
UCSC track
D. mel. Chain
UCSC
Drosophila simulans
7240
droSim1
GRanges object from on UCSC track â€˜D. mel. Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainDm3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droSim1/database/chainDm3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droSim1/database/chainDm3
UCSC track
RepeatMasker
UCSC
Drosophila simulans
7240
droSim1
GRanges object from on UCSC track â€˜RepeatMaskerâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droSim1/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droSim1/database/rmsk
UCSC track
Assembly
UCSC
Drosophila virilis
7244
droVir2
GRanges object from on UCSC track â€˜Assemblyâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droVir2/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droVir2/database/gold
UCSC track
GeneMapper
UCSC
Drosophila virilis
7244
droVir2
GRanges object from on UCSC track â€˜GeneMapperâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("geneMapper", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droVir2/database/geneMapper_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droVir2/database/geneMapper
UCSC track
D. mel. Proteins
UCSC
Drosophila virilis
7244
droVir2
GRanges object from on UCSC track â€˜D. mel. Proteinsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastDm2FB", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droVir2/database/blastDm2FB_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droVir2/database/blastDm2FB
UCSC track
Spliced ESTs
UCSC
Drosophila virilis
7244
droVir2
GRanges object from on UCSC track â€˜Spliced ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droVir2/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droVir2/database/intronEst
UCSC track
Other mRNAs
UCSC
Drosophila virilis
7244
droVir2
GRanges object from on UCSC track â€˜Other mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droVir2/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droVir2/database/xenoMrna
UCSC track
D. mel. Net
UCSC
Drosophila virilis
7244
droVir2
GRanges object from on UCSC track â€˜D. mel. Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netDm2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droVir2/database/netDm2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droVir2/database/netDm2
UCSC track
Simple Repeats
UCSC
Drosophila virilis
7244
droVir2
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droVir2/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droVir2/database/simpleRepeat
UCSC track
GC Percent
UCSC
Drosophila virilis
7244
droVir1
GRanges object from on UCSC track â€˜GC Percentâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gcPercent", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droVir1/database/gcPercent_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droVir1/database/gcPercent
UCSC track
Geneid Genes
UCSC
Drosophila virilis
7244
droVir1
GRanges object from on UCSC track â€˜Geneid Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("geneid", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droVir1/database/geneid_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droVir1/database/geneid
UCSC track
D. mel. Proteins
UCSC
Drosophila virilis
7244
droVir1
GRanges object from on UCSC track â€˜D. mel. Proteinsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastDm2FB", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droVir1/database/blastDm2FB_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droVir1/database/blastDm2FB
UCSC track
Other mRNAs
UCSC
Drosophila virilis
7244
droVir1
GRanges object from on UCSC track â€˜Other mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droVir1/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droVir1/database/xenoMrna
UCSC track
D. mel. Net
UCSC
Drosophila virilis
7244
droVir1
GRanges object from on UCSC track â€˜D. mel. Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netDm2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droVir1/database/netDm2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droVir1/database/netDm2
UCSC track
Simple Repeats
UCSC
Drosophila virilis
7244
droVir1
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droVir1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droVir1/database/simpleRepeat
UCSC track
Gap
UCSC
Drosophila yakuba
7245
droYak2
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droYak2/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droYak2/database/gap
UCSC track
Other RefSeq
UCSC
Drosophila yakuba
7245
droYak2
GRanges object from on UCSC track â€˜Other RefSeqâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droYak2/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droYak2/database/xenoRefGene
UCSC track
D. mel. Proteins
UCSC
Drosophila yakuba
7245
droYak2
GRanges object from on UCSC track â€˜D. mel. Proteinsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastDm2FB", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droYak2/database/blastDm2FB_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droYak2/database/blastDm2FB
UCSC track
Spliced ESTs
UCSC
Drosophila yakuba
7245
droYak2
GRanges object from on UCSC track â€˜Spliced ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droYak2/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droYak2/database/intronEst
UCSC track
Other mRNAs
UCSC
Drosophila yakuba
7245
droYak2
GRanges object from on UCSC track â€˜Other mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droYak2/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droYak2/database/xenoMrna
UCSC track
D. mel. Net
UCSC
Drosophila yakuba
7245
droYak2
GRanges object from on UCSC track â€˜D. mel. Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netDm3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droYak2/database/netDm3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droYak2/database/netDm3
UCSC track
Simple Repeats
UCSC
Drosophila yakuba
7245
droYak2
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droYak2/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droYak2/database/simpleRepeat
UCSC track
Gap
UCSC
Drosophila yakuba
7245
droYak1
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droYak1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droYak1/database/gap
UCSC track
Other RefSeq
UCSC
Drosophila yakuba
7245
droYak1
GRanges object from on UCSC track â€˜Other RefSeqâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droYak1/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droYak1/database/xenoRefGene
UCSC track
Geneid Genes
UCSC
Drosophila yakuba
7245
droYak1
GRanges object from on UCSC track â€˜Geneid Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("geneid", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droYak1/database/geneid_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droYak1/database/geneid
UCSC track
D. mel. Proteins
UCSC
Drosophila yakuba
7245
droYak1
GRanges object from on UCSC track â€˜D. mel. Proteinsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastDm2FB", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droYak1/database/blastDm2FB_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droYak1/database/blastDm2FB
UCSC track
Spliced ESTs
UCSC
Drosophila yakuba
7245
droYak1
GRanges object from on UCSC track â€˜Spliced ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droYak1/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droYak1/database/intronEst
UCSC track
Other mRNAs
UCSC
Drosophila yakuba
7245
droYak1
GRanges object from on UCSC track â€˜Other mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droYak1/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droYak1/database/xenoMrna
UCSC track
D. mel. Net
UCSC
Drosophila yakuba
7245
droYak1
GRanges object from on UCSC track â€˜D. mel. Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netDm2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droYak1/database/netDm2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droYak1/database/netDm2
UCSC track
Simple Repeats
UCSC
Drosophila yakuba
7245
droYak1
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/droYak1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/droYak1/database/simpleRepeat
UCSC track
Contigs
UCSC
Caenorhabditis brenneri
135651
caePb2
GRanges object from on UCSC track â€˜Contigsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("ctgPos2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/caePb2/database/ctgPos2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/caePb2/database/ctgPos2
UCSC track
tRNA Genes
UCSC
Caenorhabditis brenneri
135651
caePb2
GRanges object from on UCSC track â€˜tRNA Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/caePb2/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/caePb2/database/tRNAs
UCSC track
C. brenneri mRNAs
UCSC
Caenorhabditis brenneri
135651
caePb2
GRanges object from on UCSC track â€˜C. brenneri mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/caePb2/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/caePb2/database/mrna
UCSC track
C. brenneri ESTs
UCSC
Caenorhabditis brenneri
135651
caePb2
GRanges object from on UCSC track â€˜C. brenneri ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/caePb2/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/caePb2/database/est
UCSC track
C. elegans Chain
UCSC
Caenorhabditis brenneri
135651
caePb2
GRanges object from on UCSC track â€˜C. elegans Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainCe6", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/caePb2/database/chainCe6_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/caePb2/database/chainCe6
UCSC track
WM + SDust
UCSC
Caenorhabditis brenneri
135651
caePb2
GRanges object from on UCSC track â€˜WM + SDustâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("windowmaskerSdust", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/caePb2/database/windowmaskerSdust_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/caePb2/database/windowmaskerSdust
UCSC track
Scaffolds
UCSC
Caenorhabditis brenneri
135651
caePb1
GRanges object from on UCSC track â€˜Scaffoldsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/caePb1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/caePb1/database/gold
UCSC track
Gap
UCSC
Caenorhabditis brenneri
135651
caePb1
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/caePb1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/caePb1/database/gap
UCSC track
tRNA Genes
UCSC
Caenorhabditis brenneri
135651
caePb1
GRanges object from on UCSC track â€˜tRNA Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/caePb1/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/caePb1/database/tRNAs
UCSC track
C. brenneri mRNAs
UCSC
Caenorhabditis brenneri
135651
caePb1
GRanges object from on UCSC track â€˜C. brenneri mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/caePb1/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/caePb1/database/mrna
UCSC track
P. pacificus Chain
UCSC
Caenorhabditis brenneri
135651
caePb1
GRanges object from on UCSC track â€˜P. pacificus Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainPriPac1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/caePb1/database/chainPriPac1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/caePb1/database/chainPriPac1
UCSC track
C. briggsae Chain
UCSC
Caenorhabditis brenneri
135651
caePb1
GRanges object from on UCSC track â€˜C. briggsae Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainCb3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/caePb1/database/chainCb3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/caePb1/database/chainCb3
UCSC track
C. remanei Chain
UCSC
Caenorhabditis brenneri
135651
caePb1
GRanges object from on UCSC track â€˜C. remanei Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainCaeRem2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/caePb1/database/chainCaeRem2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/caePb1/database/chainCaeRem2
UCSC track
ce4 Chain
UCSC
Caenorhabditis brenneri
135651
caePb1
GRanges object from on UCSC track â€˜ce4 Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainCe4", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/caePb1/database/chainCe4_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/caePb1/database/chainCe4
UCSC track
RepeatMasker
UCSC
Caenorhabditis brenneri
135651
caePb1
GRanges object from on UCSC track â€˜RepeatMaskerâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/caePb1/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/caePb1/database/rmsk
UCSC track
Simple Repeats
UCSC
Caenorhabditis brenneri
135651
caePb1
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/caePb1/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/caePb1/database/simpleRepeat
UCSC track
Gap
UCSC
Caenorhabditis briggsae
6238
cb3
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cb3/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cb3/database/gap
UCSC track
Other RefSeq
UCSC
Caenorhabditis briggsae
6238
cb3
GRanges object from on UCSC track â€˜Other RefSeqâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cb3/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cb3/database/xenoRefGene
UCSC track
C.elegans Prot.
UCSC
Caenorhabditis briggsae
6238
cb3
GRanges object from on UCSC track â€˜C.elegans Prot.â€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastCe6SG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cb3/database/blastCe6SG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cb3/database/blastCe6SG
UCSC track
Spliced ESTs
UCSC
Caenorhabditis briggsae
6238
cb3
GRanges object from on UCSC track â€˜Spliced ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cb3/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cb3/database/intronEst
UCSC track
Other mRNAs
UCSC
Caenorhabditis briggsae
6238
cb3
GRanges object from on UCSC track â€˜Other mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cb3/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cb3/database/xenoMrna
UCSC track
P. pacificus Net
UCSC
Caenorhabditis briggsae
6238
cb3
GRanges object from on UCSC track â€˜P. pacificus Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netPriPac1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cb3/database/netPriPac1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cb3/database/netPriPac1
UCSC track
C. elegans Chain
UCSC
Caenorhabditis briggsae
6238
cb3
GRanges object from on UCSC track â€˜C. elegans Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainCe6", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cb3/database/chainCe6_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cb3/database/chainCe6
UCSC track
C. remanei Net
UCSC
Caenorhabditis briggsae
6238
cb3
GRanges object from on UCSC track â€˜C. remanei Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netCaeRem2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cb3/database/netCaeRem2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cb3/database/netCaeRem2
UCSC track
C. brenneri Net
UCSC
Caenorhabditis briggsae
6238
cb3
GRanges object from on UCSC track â€˜C. brenneri Netâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("netCaePb1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cb3/database/netCaePb1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cb3/database/netCaePb1
UCSC track
WM + SDust
UCSC
Caenorhabditis briggsae
6238
cb3
GRanges object from on UCSC track â€˜WM + SDustâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("windowmaskerSdust", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cb3/database/windowmaskerSdust_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cb3/database/windowmaskerSdust
UCSC track
Assembly
UCSC
Caenorhabditis briggsae
6238
cb1
GRanges object from on UCSC track â€˜Assemblyâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cb1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cb1/database/gold
UCSC track
GC Percent
UCSC
Caenorhabditis briggsae
6238
cb1
GRanges object from on UCSC track â€˜GC Percentâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gcPercent", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cb1/database/gcPercent_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cb1/database/gcPercent
UCSC track
Twinscan
UCSC
Caenorhabditis briggsae
6238
cb1
GRanges object from on UCSC track â€˜Twinscanâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("twinscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cb1/database/twinscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cb1/database/twinscan
UCSC track
Spliced ESTs
UCSC
Caenorhabditis briggsae
6238
cb1
GRanges object from on UCSC track â€˜Spliced ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cb1/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cb1/database/intronEst
UCSC track
Elegans Chain
UCSC
Caenorhabditis briggsae
6238
cb1
GRanges object from on UCSC track â€˜Elegans Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainCe2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cb1/database/chainCe2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cb1/database/chainCe2
UCSC track
RepeatMasker
UCSC
Caenorhabditis briggsae
6238
cb1
GRanges object from on UCSC track â€˜RepeatMaskerâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/cb1/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/cb1/database/rmsk
UCSC track
Assembly
UCSC
Caenorhabditis elegans
6239
ce10
GRanges object from on UCSC track â€˜Assemblyâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce10/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce10/database/gold
UCSC track
Other RefSeq
UCSC
Caenorhabditis elegans
6239
ce10
GRanges object from on UCSC track â€˜Other RefSeqâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce10/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce10/database/xenoRefGene
UCSC track
Human Proteins
UCSC
Caenorhabditis elegans
6239
ce10
GRanges object from on UCSC track â€˜Human Proteinsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastHg18KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce10/database/blastHg18KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce10/database/blastHg18KG
UCSC track
Spliced ESTs
UCSC
Caenorhabditis elegans
6239
ce10
GRanges object from on UCSC track â€˜Spliced ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce10/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce10/database/intronEst
UCSC track
Other mRNAs
UCSC
Caenorhabditis elegans
6239
ce10
GRanges object from on UCSC track â€˜Other mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce10/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce10/database/xenoMrna
UCSC track
RepeatMasker
UCSC
Caenorhabditis elegans
6239
ce10
GRanges object from on UCSC track â€˜RepeatMaskerâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce10/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce10/database/rmsk
UCSC track
Simple Repeats
UCSC
Caenorhabditis elegans
6239
ce10
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce10/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce10/database/simpleRepeat
UCSC track
Gap
UCSC
Caenorhabditis elegans
6239
ce6
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce6/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce6/database/gap
UCSC track
WormBase Genes
UCSC
Caenorhabditis elegans
6239
ce6
GRanges object from on UCSC track â€˜WormBase Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("sangerGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce6/database/sangerGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce6/database/sangerGene
UCSC track
WormBase PseudoGenes
UCSC
Caenorhabditis elegans
6239
ce6
GRanges object from on UCSC track â€˜WormBase PseudoGenesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("sangerPseudoGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce6/database/sangerPseudoGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce6/database/sangerPseudoGene
UCSC track
Other RefSeq
UCSC
Caenorhabditis elegans
6239
ce6
GRanges object from on UCSC track â€˜Other RefSeqâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoRefGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce6/database/xenoRefGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce6/database/xenoRefGene
UCSC track
tRNA Genes
UCSC
Caenorhabditis elegans
6239
ce6
GRanges object from on UCSC track â€˜tRNA Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce6/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce6/database/tRNAs
UCSC track
Spliced ESTs
UCSC
Caenorhabditis elegans
6239
ce6
GRanges object from on UCSC track â€˜Spliced ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce6/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce6/database/intronEst
UCSC track
Other mRNAs
UCSC
Caenorhabditis elegans
6239
ce6
GRanges object from on UCSC track â€˜Other mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce6/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce6/database/xenoMrna
UCSC track
P. pacificus Chain
UCSC
Caenorhabditis elegans
6239
ce6
GRanges object from on UCSC track â€˜P. pacificus Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainPriPac1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce6/database/chainPriPac1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce6/database/chainPriPac1
UCSC track
C. japonica Chain
UCSC
Caenorhabditis elegans
6239
ce6
GRanges object from on UCSC track â€˜C. japonica Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainCaeJap1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce6/database/chainCaeJap1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce6/database/chainCaeJap1
UCSC track
C. brenneri Chain
UCSC
Caenorhabditis elegans
6239
ce6
GRanges object from on UCSC track â€˜C. brenneri Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainCaePb2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce6/database/chainCaePb2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce6/database/chainCaePb2
UCSC track
C. briggsae Chain
UCSC
Caenorhabditis elegans
6239
ce6
GRanges object from on UCSC track â€˜C. briggsae Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainCb3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce6/database/chainCb3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce6/database/chainCb3
UCSC track
C. remanei Chain
UCSC
Caenorhabditis elegans
6239
ce6
GRanges object from on UCSC track â€˜C. remanei Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainCaeRem3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce6/database/chainCaeRem3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce6/database/chainCaeRem3
UCSC track
RepeatMasker
UCSC
Caenorhabditis elegans
6239
ce6
GRanges object from on UCSC track â€˜RepeatMaskerâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce6/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce6/database/rmsk
UCSC track
Simple Repeats
UCSC
Caenorhabditis elegans
6239
ce6
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce6/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce6/database/simpleRepeat
UCSC track
Self Chain
UCSC
Caenorhabditis elegans
6239
ce6
GRanges object from on UCSC track â€˜Self Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainSelf", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce6/database/chainSelf_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce6/database/chainSelf
UCSC track
Gap
UCSC
Caenorhabditis elegans
6239
ce4
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce4/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce4/database/gap
UCSC track
WormBase RNAs
UCSC
Caenorhabditis elegans
6239
ce4
GRanges object from on UCSC track â€˜WormBase RNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("sangerRnaGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce4/database/sangerRnaGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce4/database/sangerRnaGene
UCSC track
RefSeq Genes
UCSC
Caenorhabditis elegans
6239
ce4
GRanges object from on UCSC track â€˜RefSeq Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce4/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce4/database/refGene
UCSC track
tRNA Genes
UCSC
Caenorhabditis elegans
6239
ce4
GRanges object from on UCSC track â€˜tRNA Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce4/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce4/database/tRNAs
UCSC track
Human Proteins
UCSC
Caenorhabditis elegans
6239
ce4
GRanges object from on UCSC track â€˜Human Proteinsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("blastHg18KG", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce4/database/blastHg18KG_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce4/database/blastHg18KG
UCSC track
Spliced ESTs
UCSC
Caenorhabditis elegans
6239
ce4
GRanges object from on UCSC track â€˜Spliced ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("intronEst", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce4/database/intronEst_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce4/database/intronEst
UCSC track
Other mRNAs
UCSC
Caenorhabditis elegans
6239
ce4
GRanges object from on UCSC track â€˜Other mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("xenoMrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce4/database/xenoMrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce4/database/xenoMrna
UCSC track
P. pacificus Chain
UCSC
Caenorhabditis elegans
6239
ce4
GRanges object from on UCSC track â€˜P. pacificus Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainPriPac1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce4/database/chainPriPac1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce4/database/chainPriPac1
UCSC track
C. briggsae Chain
UCSC
Caenorhabditis elegans
6239
ce4
GRanges object from on UCSC track â€˜C. briggsae Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainCb3", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce4/database/chainCb3_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce4/database/chainCb3
UCSC track
C. remanei Chain
UCSC
Caenorhabditis elegans
6239
ce4
GRanges object from on UCSC track â€˜C. remanei Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainCaeRem2", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce4/database/chainCaeRem2_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce4/database/chainCaeRem2
UCSC track
C. brenneri Chain
UCSC
Caenorhabditis elegans
6239
ce4
GRanges object from on UCSC track â€˜C. brenneri Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainCaePb1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce4/database/chainCaePb1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce4/database/chainCaePb1
UCSC track
RepeatMasker
UCSC
Caenorhabditis elegans
6239
ce4
GRanges object from on UCSC track â€˜RepeatMaskerâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("rmsk", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce4/database/rmsk_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce4/database/rmsk
UCSC track
Simple Repeats
UCSC
Caenorhabditis elegans
6239
ce4
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce4/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce4/database/simpleRepeat
UCSC track
Self Chain
UCSC
Caenorhabditis elegans
6239
ce4
GRanges object from on UCSC track â€˜Self Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainSelf", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce4/database/chainSelf_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce4/database/chainSelf
UCSC track
Gap
UCSC
Caenorhabditis elegans
6239
ce2
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce2/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce2/database/gap
UCSC track
WormBase Genes
UCSC
Caenorhabditis elegans
6239
ce2
GRanges object from on UCSC track â€˜WormBase Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("sangerGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce2/database/sangerGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce2/database/sangerGene
UCSC track
RefSeq Genes
UCSC
Caenorhabditis elegans
6239
ce2
GRanges object from on UCSC track â€˜RefSeq Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("refGene", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce2/database/refGene_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce2/database/refGene
UCSC track
Twinscan
UCSC
Caenorhabditis elegans
6239
ce2
GRanges object from on UCSC track â€˜Twinscanâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("twinscan", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce2/database/twinscan_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce2/database/twinscan
UCSC track
miRNA
UCSC
Caenorhabditis elegans
6239
ce2
GRanges object from on UCSC track â€˜miRNAâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("miRNA", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce2/database/miRNA_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce2/database/miRNA
UCSC track
C. elegans mRNAs
UCSC
Caenorhabditis elegans
6239
ce2
GRanges object from on UCSC track â€˜C. elegans mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce2/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce2/database/mrna
UCSC track
C. elegans ESTs
UCSC
Caenorhabditis elegans
6239
ce2
GRanges object from on UCSC track â€˜C. elegans ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce2/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce2/database/est
UCSC track
PicTar miRNA
UCSC
Caenorhabditis elegans
6239
ce2
GRanges object from on UCSC track â€˜PicTar miRNAâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("picTar", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce2/database/picTar_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce2/database/picTar
UCSC track
Most Conserved
UCSC
Caenorhabditis elegans
6239
ce2
GRanges object from on UCSC track â€˜Most Conservedâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("phastConsElements", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce2/database/phastConsElements_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce2/database/phastConsElements
UCSC track
Briggsae Chain
UCSC
Caenorhabditis elegans
6239
ce2
GRanges object from on UCSC track â€˜Briggsae Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainCb1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce2/database/chainCb1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce2/database/chainCb1
UCSC track
Briggase Aligns
UCSC
Caenorhabditis elegans
6239
ce2
GRanges object from on UCSC track â€˜Briggase Alignsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("axtNetCb1", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce2/database/axtNetCb1_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce2/database/axtNetCb1
UCSC track
Simple Repeats
UCSC
Caenorhabditis elegans
6239
ce2
GRanges object from on UCSC track â€˜Simple Repeatsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("simpleRepeat", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/ce2/database/simpleRepeat_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/ce2/database/simpleRepeat
UCSC track
Assembly
UCSC
Caenorhabditis japonica
281687
caeJap1
GRanges object from on UCSC track â€˜Assemblyâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/caeJap1/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/caeJap1/database/gold
UCSC track
Gap
UCSC
Caenorhabditis japonica
281687
caeJap1
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/caeJap1/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/caeJap1/database/gap
UCSC track
tRNA Genes
UCSC
Caenorhabditis japonica
281687
caeJap1
GRanges object from on UCSC track â€˜tRNA Genesâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("tRNAs", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/caeJap1/database/tRNAs_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/caeJap1/database/tRNAs
UCSC track
C. japonica mRNAs
UCSC
Caenorhabditis japonica
281687
caeJap1
GRanges object from on UCSC track â€˜C. japonica mRNAsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("mrna", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/caeJap1/database/mrna_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/caeJap1/database/mrna
UCSC track
C. japonica ESTs
UCSC
Caenorhabditis japonica
281687
caeJap1
GRanges object from on UCSC track â€˜C. japonica ESTsâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("est", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/caeJap1/database/est_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/caeJap1/database/est
UCSC track
C. elegans Chain
UCSC
Caenorhabditis japonica
281687
caeJap1
GRanges object from on UCSC track â€˜C. elegans Chainâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("chainCe6", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/caeJap1/database/chainCe6_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/caeJap1/database/chainCe6
UCSC track
WM + SDust
UCSC
Caenorhabditis japonica
281687
caeJap1
GRanges object from on UCSC track â€˜WM + SDustâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("windowmaskerSdust", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/caeJap1/database/windowmaskerSdust_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/caeJap1/database/windowmaskerSdust
UCSC track
Assembly
UCSC
Caenorhabditis remanei
31234
caeRem3
GRanges object from on UCSC track â€˜Assemblyâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gold", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/caeRem3/database/gold_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/caeRem3/database/gold
UCSC track
Gap
UCSC
Caenorhabditis remanei
31234
caeRem3
GRanges object from on UCSC track â€˜Gapâ€™
1
Marc Carlson <mcarlson@fhcrc.org>
2013-04-04
UCSCFullTrackImportPreparer
c("gap", "UCSC", "track", "Gene", "Transcript", "Annotation")
GRanges
goldenpath/caeRem3/database/gap_0.0.1.RData
rtracklayer://hgdownload.cse.ucsc.edu/goldenpath/caeRem3/database/gap
UCSC track